Takifugu flavidus (sansaifugu): 130534727
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Entry
130534727 CDS
T09160
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130534727 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfs03019
]
130534727 (dhx36)
03012 Translation factors [BR:
tfs03012
]
130534727 (dhx36)
Enzymes [BR:
tfs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
130534727 (dhx36)
Messenger RNA biogenesis [BR:
tfs03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
130534727 (dhx36)
Translation factors [BR:
tfs03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
130534727 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
nSTAND3
ATPase
NB-ARC
AAA_19
AAA_16
NACHT
Motif
Other DBs
NCBI-GeneID:
130534727
NCBI-ProteinID:
XP_056905195
LinkDB
All DBs
Position
12:6367805..6386109
Genome browser
AA seq
1046 aa
AA seq
DB search
MSYGYGGGGGRRGRRGGRGHRDGSRERWDRSGGSRGHSSDFDQDRSGQRDRPPPHLKGRE
IGLWYAKYGAVRRKQADRRSRAVVQMDESREQHITKLLNSVQSNHPGPDGASTSANTGHC
YFDGEAPEEEKPDIKSEEEDNIHPSQKKASLKSGRCLSTKYVKDEPPDTWDEEEQLLEGD
KEEEEKKTLERKDKDLEFLFHEVQRNGSLDDRLKRDLLEKKSEPKYKEMLQFREKLPSYG
KKEDLMALINSNRVVVVSGETGCGKTTQVTQFILDDHISRGLGSICRVVCTQPRRISAIS
VAERVAAERAESVGNGNSCGYQIRLQSRLPRRQGSILYCTTGIILQWLHSDPLLSSISHL
VLDEIHERNLQSDVLLIIVKDLLSLRDDLKIILMSATLNAEKFSKYFDRCPMIHIPGFTF
PVEEFLLEDVVQMTRYLPQKKEGRPRWKKGFWQGRNFRPEKEEKEAEYLESWPCYARTLK
DRYSDDTVQAVEMLDSDEKIDLQLIMSLIRHVVLNEGEGAILVFLPGWDGISSLNDLLMA
QQMFRSDRFVIIPLHSLMPTVNQTQVFKRPPPGVRKIVIATNIAETSITIDDVVFVIDGG
KIKETHFDTNNNISTMTEEWVSLANAKQRKGRAGRVCPGKCYHLYNGLRASLMDAYQLPE
ILRTPLEELCLQIKILKLGSIARFLEKALDPPTEKAVSLAIKNLTDLNALDHTENLTALG
FHLARLPVEPHIGKLILFGALLGCLDPVLTIAASLSFKDPFFIPLGKEKMADMRRKVLSR
NSKSDHLTIINAFQGWEQAKQRGARYEREYCWDNFLSSNTLQMLQNMKGQFAEHLMHAGF
VSSADPKDPKSNVNSDNEKLIKAVIVAGLYPKVATIRPSYSKKRPGVKVYTQADGRVYIH
PKSVNAEEREFNYKWLIYHLKMRTSSIFLYDCTEVSPFSLLFFGGDITIQKEEGDETVAV
DQWIVFRCPARIAHLVKSLKKELDSLLEEKIQNPAPVDWQNSQSKDCAVISAIIDLITTQ
EKLAGGSGGYDSAPPPRGQHFYFDDD
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgagttacggatacggcggcggaggtggaagaagaggcagaagaggtggtcgagggcac
agagatggaagcagagagcggtgggacagaagtggcggctcgaggggacacagttctgac
tttgaccaagaccgaagtggacaacgggatcgtcctccaccgcacctgaagggccgtgag
atcggtctgtggtacgcaaaatatggtgctgtcaggaggaagcaggctgatcgcagatct
cgggcagtggtccaaatggatgagtccagagagcagcacattaccaagctgctcaattct
gtccagagcaatcaccctggtccagatggagcctccacctctgccaacacaggccactgt
tactttgatggggaagcacccgaagaggagaaacctgacatcaaatctgaggaagaggac
aacattcatcctagccagaagaaagcaagtctcaagtcaggacggtgcctctccacaaaa
tatgttaaagatgagccgccggacacgtgggatgaagaagagcagttgctggagggggat
aaggaggaagaggagaaaaagacgctggaaagaaaagacaaagacttggagttcttgttt
catgaagtacagagaaatggttcactggatgaccgattaaagagagatctgctggaaaag
aaatcggagccaaagtacaaagagatgctgcaatttagggaaaaacttccatcctatgga
aaaaaagaggatttgatggcgctgatcaactctaaccgcgtggttgtggtcagcggggaa
acggggtgcggaaaaaccactcaggtcacccagttcatcctcgacgaccacatcagtcgc
gggttgggctccatttgccgggtggtctgcactcagcctcgccgcatcagcgccatctcg
gtggcagagcgtgtagcagcggagcgggcagaaagtgttggaaatggaaactcctgtggt
tatcagatccgcctgcagagccggttaccaaggagacaggggtcgattctgtactgtaca
acaggcataattcttcagtggcttcactcagaccccctcctgtccagcatcagtcatctt
gtgctggacgaaattcacgagagaaacctgcagtcggatgtgttgctcatcatcgtcaag
gacctgctcagcctccgggatgacctcaaaatcatcctcatgagcgccacgctcaacgca
gagaagttctccaagtactttgacaggtgcccaatgatccacatccctggtttcaccttc
ccagtggaggagtttctactggaggatgttgtgcagatgaccaggtaccttccgcagaag
aaggagggacggcccaggtggaaaaaaggcttttggcaggggcgtaatttcaggcctgag
aaggaggagaaagaggcagaatacttggaaagctggccctgttatgcacgcaccctgaaa
gacagatactctgacgacaccgtccaagcagtggagatgttggacagcgatgagaagatc
gacttgcaactgattatgtcgctcatccgccatgttgtgcttaatgaaggggaaggagcc
atcttggtgttcctgcctggctgggacggcatcagctccctcaatgatctgctcatggcc
cagcagatgtttcgatcagatcgattcgtcatcatccccttgcactctctcatgcctaca
gttaatcaaacgcaggtgttcaagagacctcctcctggagttagaaagattgtgattgct
accaatatagctgagaccagcatcaccatagatgatgtggtgtttgtcatcgacggaggc
aaaattaaggagacccacttcgacaccaacaacaacatcagcaccatgacggaggagtgg
gtcagcttggccaacgccaaacagagaaaaggccgcgctggcagggtgtgcccggggaag
tgctaccatctttacaacggtctgagagccagcctgatggatgcctatcagctgcctgaa
atcctgcggacgcctctggaggagctgtgcctgcagattaagatattgaagcttggctct
atagctcggtttttggagaaagccttggaccctcccacagaaaaagctgtcagtctggcc
atcaagaacctcacagatctgaatgctctggaccacacagagaatctaacggccctgggg
ttccacctggcccgccttcccgtagagcctcacataggcaagctgatcctgttcggggct
ctgctgggctgcctggaccctgtcctcaccatcgccgcgtcgctcagcttcaaagatccc
ttcttcatacccctgggcaaagagaagatggcagacatgaggaggaaggtgctgtcaagg
aactcgaagagcgaccacctcactattatcaacgcttttcagggatgggagcaggcaaaa
caacgcggtgccaggtatgaaagggaatactgctgggataacttcctgtcctccaacacg
ctccagatgctacaaaacatgaaaggtcagttcgccgagcacctgatgcacgccggcttc
gtcagcagcgctgaccccaaagaccccaaatcgaatgtcaattcagataacgagaagcta
atcaaggctgtcatcgtcgccggtctgtacccgaaggtggccacgatcaggccgtcttac
agcaaaaagagacccggagttaaggtgtacactcaggccgacgggagggtctacatccac
cccaagtcggtcaacgccgaagagagggaatttaactacaagtggctcatttaccacctg
aagatgagaacaagcagcatcttcctgtacgactgcaccgaggtgtcgccgttctcgctg
ctgttctttggaggagacatcacgatccagaaggaggagggcgacgagacggtcgccgtg
gaccagtggatcgtcttcaggtgcccggcgcgcatcgctcacctcgtcaagagtttgaaa
aaggagctggactccctgctggaggagaaaattcagaatcctgctccggtggactggcag
aacagtcagtccaaagactgcgcagtcatcagcgccatcatcgacctcatcaccactcag
gagaagctcgccggcggcagcggaggttacgacagtgcgcctcctccgagaggacagcac
ttttactttgatgacgactaa
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integrated database retrieval system
