Takifugu flavidus (sansaifugu): 130534876
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Entry
130534876 CDS
T09160
Symbol
srsf1a
Name
(RefSeq) serine/arginine-rich splicing factor 1A isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03040
Spliceosome
tfs05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130534876 (srsf1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
130534876 (srsf1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tfs03041
]
130534876 (srsf1a)
Spliceosome [BR:
tfs03041
]
Common components
Common spliceosomal components
SR proteins
130534876 (srsf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
CoV_nucleocap
Motif
Other DBs
NCBI-GeneID:
130534876
NCBI-ProteinID:
XP_056905473
LinkDB
All DBs
Position
12:complement(4940475..4943622)
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AA seq
245 aa
AA seq
DB search
MSGVVRGPAGNNDCRIYVGNLPPDIRTKDVEDVFYKYGTIRDIDLKNRRGGPPFAFIEFE
DPRDADDAVYGRDGYDYDGYRLRVEFPRSGRGSRGGFGGIGGAPRGRYGPPSRRSEYRVL
VSGLPQSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHE
GETAYIQVKLDGPRSPSYGRSRSRSRGSRSRSRSRSASRSRSNSRGRGRGSPRYSPRHSR
SRSRS
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtgttgtgcgtggtcccgcagggaacaacgactgccgaatttatgtgggaaac
ctccctccagacattcgcacaaaagatgttgaagacgttttctacaaatacggaaccatt
cgagatatcgacctcaagaatcggagaggaggaccaccgtttgccttcatcgaatttgaa
gatcccagggatgcagatgatgcagtctacgggcgtgatggctacgactacgacggctac
agactgcgagtggagtttcctcggagcggcaggggctccagaggcggctttggtggcatc
ggaggggcgccgagaggcagatacggacccccatccagacgctcagagtacagggtcctt
gtgtcagggctcccacagagcggcagctggcaagatctgaaggaccacatgcgtgaagcc
ggcgacgtttgctacgccgacgtctacagggatgggactggagttgtagagtttgtgcgc
aaagaagacatgacctatgctgttcgaaagctggacaacaccaaattccgctcgcatgag
ggagagaccgcttacattcaggtgaaattagacggtccacgcagcccaagttacggaaga
tcacgctcccgaagccgtggcagccggagcaggagccggagtcgcagtgccagccgcagt
cgcagcaattcccgtggccgcggcagaggatctccccgctactcacctcgtcacagccgc
tctcgctctcgttcctaa
DBGET
integrated database retrieval system
