Takifugu flavidus (sansaifugu): 130534901
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Entry
130534901 CDS
T09160
Symbol
trub1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tfs03016
]
130534901 (trub1)
Enzymes [BR:
tfs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
130534901 (trub1)
Transfer RNA biogenesis [BR:
tfs03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
130534901 (trub1)
Prokaryotic type
130534901 (trub1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
AraR_C
PduV-EutP
Motif
Other DBs
NCBI-GeneID:
130534901
NCBI-ProteinID:
XP_056905532
LinkDB
All DBs
Position
1:complement(22059748..22073323)
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AA seq
234 aa
AA seq
DB search
MANVSSTSGTSSLSKLQSLNGLFAIYKKPGPTSADVLNSLKTALLNEAGVQNLNPRKRKK
QEIKMGHGGTLDSAASGVLVVGVGYGTKMLSTMLKGSKMPYEHITRFDFEEKMKGFTGDI
MQVPPLYSALKTHGQRLSVLLKKGHKVEAKPARPVTVYNLDLKEFKPPHFTLDVECGGGF
YVRSLVDDLGKALSSCAHVKELIRTKQDRFTLEHHALHEEHWTFEHIMRSLQPC
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacgttagttccacttcgggaactagttctctctctaagctacaatctttgaat
ggactgtttgcgatatataaaaaaccaggaccgacgtctgccgatgtgttaaacagtctc
aaaacagcattgctaaatgaagctggtgttcaaaacttaaatccgcgaaaaagaaagaaa
caagagatcaagatgggtcacggggggacgctggacagcgctgccagtggggtgctcgtt
gtcggtgtcgggtatggtactaaaatgctctcaacaatgttaaagggttcaaagatgccg
tatgaacacataactaggttcgactttgaggagaaaatgaaaggtttcacaggtgacatc
atgcaggttcctccactatactctgctctaaagacacatggccagcgtctgtctgtcctt
ctaaagaaaggtcacaaggtagaagccaagccagctcgccccgtcactgtctacaattta
gatctaaaggagttcaaacctccacacttcacacttgatgttgagtgtggtggaggattt
tatgtcagaagcttggtagatgacctgggaaaagctctttcatcatgcgctcatgtaaag
gaactgatccggaccaaacaagatcgctttactctggaacaccatgccttgcatgaggag
cactggacctttgaacatataatgcgttctctgcagccatgctga
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