Takifugu flavidus (sansaifugu): 130535033
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Entry
130535033 CDS
T09160
Name
(RefSeq) SR-related and CTD-associated factor 4-like
KO
K13167
SR-related and CTD-associated factor 4
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tfs03021
]
130535033
03041 Spliceosome [BR:
tfs03041
]
130535033
Transcription machinery [BR:
tfs03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
130535033
Spliceosome [BR:
tfs03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
130535033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
130535033
NCBI-ProteinID:
XP_056905806
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All DBs
Position
12:complement(3672829..3685390)
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AA seq
709 aa
AA seq
DB search
MDAVNAFNMELFSMIDMKPPISRAKMMSVTKAAIKAIKLYKHVVQIVEKFIKKCKPELKV
PGLYVIDSIVRQSRHQFGVDKDVFGPRFLKNFTETFQNLYHCQGEDKTKIVRVLNLWQKN
GVFDTNILQSLVDMANGNISPNIVEAAQTQLPVTSPTVVSSEPQLPTTDALAAVAQLFQS
QHGQELQRILQNFQQADKTFANNSLTPPHMPVTPLGSYNAHKEKKSSLAEKLLDRFEYDD
DPEDVTAKEGNTQPQGISEKLILESVHMLAQASGIQDGKMSHAEHQTLPDRYHPINDAYS
YCEGSSREDSGFIQEGRHRSYNRRSGSRSPRRRRSRSSSRSRRGRPEHSRPRERRWRSRS
GDRSERENRERRQKGLPTIKSHTLSVCSTTLWIGQLDKKTQQSDVVSLLEEFGQIESINM
IPPRGCAYIVMVHRQDAYTALNKLSRGSYRVNQKPVKIAWALNKGIKSTHKKFWDVEQGV
TYIPWSKVRVEDLESYREGGMLDADTLDPAWNIANDLKMVAANGALESVSVDGVSQVQTQ
PLDQATPIGSPLRFTGAVVMPPASMPPAETAFMHVEIERTVLPPGNEEDSKANDILLSMR
MVNQLGTVLTIPAPRSGFPHLQPPASTPGPCPSPFLSPPYMPHLPPQMMHRRPVFPPGRY
SVAVPFPPRDPLFHQHPAMEPEGMDDGEVRHFGNGNPRFPHPRFHRGSW
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagtaaacgcgttcaacatggagttgttctccatgattgacatgaagcctcca
atatcccgcgctaagatgatgtcggttacaaaagcagccattaaagcgatcaagctttac
aaacatgttgtccagattgtggaaaagtttatcaagaagtgcaagccagaattaaaagtc
cctgggttgtatgtgattgattcgattgttcgacagtcacggcatcagtttggtgtcgac
aaggacgtgtttggccccagattcctgaagaacttcactgagacttttcaaaacctttat
cactgccaaggggaagacaagaccaaaatagtccgcgtgctgaacctgtggcagaagaat
ggggtgtttgacacaaatatactccagtctttagtagacatggcaaatggaaatatttct
cctaatatagttgaggctgctcagacacagctgcccgtcactagtcccacagttgtgtcc
agtgagccccagctacccacgactgatgccttagctgctgtggcacagctgtttcagtca
cagcatggacaggagctgcagagaatactccagaatttccagcaggcagataagactttt
gcaaacaacagcctgaccccaccacatatgcctgtgaccccgctcggctcctacaatgca
cacaaagaaaagaaaagctctttagcagagaaactcctggaccgatttgagtatgatgat
gacccagaggatgtaactgctaaagaaggaaatactcagccacaaggtatttctgaaaaa
ctgatacttgagagtgttcatatgttggcccaagccagtggtatacaggatggtaaaatg
agtcatgctgagcatcaaacactaccagacagataccatcccataaatgatgcttattca
tactgtgagggaagttcaagagaagattcgggttttattcaggaagggagacacagaagt
tataacaggcgatcaggttcaagatctccaaggagaagaagatcaagatcgtcatcccgc
tccaggaggggtaggcctgagcattcccgacccagggaaaggcgttggaggtctcgttct
ggtgacaggagtgagagggaaaacagagagcgcagacagaaaggtcttcctaccataaaa
agccacactctcagcgtttgcagtactacactatggattggacagctggacaagaaaacc
cagcagtctgatgtggtgtcccttttagaagagtttggccagattgagtcaattaatatg
atccctccgagaggctgtgcttatatcgtcatggttcacagacaagacgcctacacagcc
ttgaacaagctcagtcggggatcgtacagagtcaaccagaaaccagtgaagatcgcctgg
gccttgaacaaaggtataaaatcaactcacaaaaagttctgggatgtagagcaaggagtt
acctacatcccctggagcaaggtcagagttgaggatttggagagctatcgggaaggtggt
atgctcgatgcagacactttagatccagcctggaatattgccaatgaccttaaaatggtg
gctgcaaatggagcattggaaagtgtgtcagtagatggagtctcgcaagttcagacacag
ccccttgatcaggcaacacccatcgggagtccgcttcgcttcactggagccgttgtcatg
ccccctgcatccatgccccctgcagaaactgctttcatgcacgtggagattgagcggaca
gtgttgccaccaggaaatgaagaggatagtaaagcaaacgatatccttctctccatgcgt
atggtcaaccagctggggactgttttgaccattcctgctccccggtcaggtttccctcat
ctgcagcctcctgccagcacccctgggccttgcccttcgccgtttctctcccccccatac
atgccacacttaccgccacaaatgatgcacaggcggcccgtgttccctcccgggaggtac
agcgtggccgtgcccttccctccccgcgaccctctttttcatcagcaccctgccatggaa
ccagaaggcatggatgatggagaagtaaggcattttggaaatggaaatccaaggtttcca
catccacgcttccacagagggagttggtag
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