Takifugu flavidus (sansaifugu): 130535545
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Entry
130535545 CDS
T09160
Symbol
exosc5
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130535545 (exosc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfs03019
]
130535545 (exosc5)
Messenger RNA biogenesis [BR:
tfs03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
130535545 (exosc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
CN_hydrolase
Motif
Other DBs
NCBI-GeneID:
130535545
NCBI-ProteinID:
XP_056906606
LinkDB
All DBs
Position
12:3647439..3649865
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AA seq
219 aa
AA seq
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MEVCGISNVTLRDFSCEQSLLSRPDGSSSFMQGDTSVLAGVYGPAEVKVSKEIYDRATLE
VLIQPKVGLPSVKERSQEQNVRETCEASLLLSLHPRSSLTLVLQVLHDDGSLLSCFLNAA
CMALMDAGLPMSCLFCGVTCAIAADGEIITDPTAAQEKECRALLTFAIDSKKCRVMMSST
KGSFSVQELQQCIAISQKASEKIFQFYRDSVQRRYSKNL
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgtgcggcatttcaaatgttactctcagggattttagttgtgaacagagtttg
ttgtctcgtcctgacggttcatcgtcatttatgcaaggggacacaagtgtgttggccggg
gtgtatggaccagctgaagtgaaagtcagcaaagaaatctatgaccgtgcaacactggag
gtgttgatacagcctaaagtgggactaccaagcgtgaaggagcgatcacaagagcagaat
gtgcgagagacctgtgaggcatctctgctcctgtcacttcaccctcgctcctcgctcact
cttgttcttcaggtgttacatgatgatggttcattattatcctgttttttgaatgctgcc
tgtatggccctaatggacgcaggtctgcccatgagctgcctgttctgcggagtaacgtgc
gctattgcagcggatggggaaatcatcactgaccccactgcagcccaggagaaggaatgt
cgagctttgctgacttttgctattgacagtaagaaatgcagagtaatgatgtcatcaacc
aaaggatccttttcagttcaagaactgcagcagtgtatagcaatcagtcagaaagcatct
gagaagatcttccagttctacagagactctgtccagcgacgatattccaaaaacctctga
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