Takifugu flavidus (sansaifugu): 130535709
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Entry
130535709 CDS
T09160
Symbol
acanb
Name
(RefSeq) aggrecan core protein
KO
K06792
aggrecan 1
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tfs00535
]
130535709 (acanb)
00536 Glycosaminoglycan binding proteins [BR:
tfs00536
]
130535709 (acanb)
04091 Lectins [BR:
tfs04091
]
130535709 (acanb)
Proteoglycans [BR:
tfs00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
130535709 (acanb)
Glycosaminoglycan binding proteins [BR:
tfs00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
130535709 (acanb)
Lectins [BR:
tfs04091
]
C-Type lectins
Group 1: Proteoglycan core proteins
130535709 (acanb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
V-set
UL45
ig
PGDH_inter
Motif
Other DBs
NCBI-GeneID:
130535709
NCBI-ProteinID:
XP_056906888
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All DBs
Position
13:711371..720604
Genome browser
AA seq
1294 aa
AA seq
DB search
MSPLLLLCVFLPFISATVTLEDHEDLDGRLRVSIPLERPVHPVLGSKVLVPCYFQDNIVN
NPRTPTVTPLLHRIKWTYITKEKIHTILVASEGKVHVETEYLDRVTMINYPLVSTDASIE
ITELRSKDSGTYRCEVIHGIEDNYDSVNIQVQGIVFHYRAITSRYTLTFEKAKAACIQNS
ATIATPAQLQAAYDDGYHQCDAGWLSDETVRYPIQEPREPCYGDKDNFPGVRTYGVRDVN
ETYDVYCFAEKMSGRVFYSMSVEKFSFYEAKDQCAKLGARLATTGELYLAWKAGMDVCNA
GWLEDRSVRYPINIARPQCGGGLLGVRTVYLFHNQTGYPYPDSRYDAICFQDLEDEGVVS
MTTTPFPDIVHETLAPGVYPGLTPSPREEESLGGDIVTLSPDSKETHVVHEPGFDLTDAI
MAPMGVLFHYRPIMGRYTLSFVEAQQACRDIGAVIASPPQLQAAFEKGFHQCDAGWLSDQ
TVRYPIVSPRENCAGNLSQLPGVRSYGLRPPNEQYDVFCYVERSQGQVFFTSDYDSFSYD
EAVQHCLNLNTTLATTAQIYAAWSQGLDKCRPGWLMDRSVRYPITTPRPNCGGGQAGVHT
IYAFSNQTGFPDEHSRYDAYCFKAETEGSLNVTSVIEEYMNKTIISVHKFVPAETTSEKI
TEIEDFINKTIIIPEQAVPSVGPILPPVLVEESGSGSPDHSTSGETSSTSSACSKISVVG
QQIILCKDTIIPSGDHSASGGPREVEAGSAVMFTSGDVGSTSASGSGEGFDGQHSGVSAS
GSGFISGSGEINATGDDLVITIVDGKMVEMMKQEKLPEQESHGGIDTSGTLWETSASGSG
VMSGSEDVSGIMSGSGIVISSGVMSGSGSADGSGVMIGSGVMSGSGVISGSGLLSGSGVM
SGLGSGELSGISFVDHDAVDLTAGLDDKQEVSGYIRSDFHSGFPSGFPSTDSGSGSASGD
QHDGDIIYLADTDIFEIAVPPMTSLPEQGRGVVEISGEETGSGSHSGFSTTLERSLNMSG
SGPPSDGSGQSGQEKRESNVDPSASEMSPNSFYSSPTTPLVSLQTPAVVKEPEIVEGVQG
CPEGWLEFKGSCYLHFVEKDTWSEAEQRCQELNAHLVSITSPEEQQFVNSNGQDYQWIGL
NDKDVQNVFRWTDGSPLNFENWRANQPDNYLNSREDCVVMIWHEGGQWNDVPCDYYLPFT
CKTGPVMCGPPPEVKHGQPMGSSQQRYPVNTIIRYQCEEGYIQRHQPVIHCLSEGQWEEP
QVECTEAGANSNRLQKRSLRRSKGGRRQETRKHL
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgttgcttctgctgtgcgtattcttacctttcatctcagcgactgtaacactt
gaagaccatgaagaccttgatggtagattacgcgtgagcatccccttggagaggcctgtc
catcctgtcctgggcagcaaggtcctggtaccgtgttatttccaagacaacatagtgaac
aaccccagaacaccaactgtcaccccactcttacaccggatcaagtggacttatatcacc
aaggagaaaatccacacaatccttgttgcatccgaggggaaagttcatgtggagactgag
tatttggacagggtgacaatgatcaactaccccctggtttccactgatgcctccatagag
ataacggagctgagatccaaagattctggcacctaccgctgtgaggtgatacacggcatt
gaagacaactatgactctgtgaacatccaggttcaaggaattgtgtttcattaccgggcc
atcacctctcggtataccctgacctttgagaaagctaaagcagcctgtatccagaacagt
gccaccattgccactccagcacaactccaagctgcttatgatgatggttatcaccagtgt
gatgcaggatggctctctgatgagaccgtcaggtatcccatccaagagccacgggagcct
tgctatggtgacaaggacaacttccctggtgtgagaacttatggcgtgagagatgttaat
gagacctatgatgtatactgttttgctgagaagatgtcaggcagagtgttctattccatg
tctgttgagaaattttccttctacgaagcaaaggatcagtgcgccaaacttggtgctcga
cttgcaaccactggagagctctacttggcctggaaggctggcatggatgtgtgtaatgct
ggctggttggaggacaggagtgtacgttaccccatcaacatcgccaggcctcagtgtgga
ggagggcttctgggggtgcgaactgtttacctcttccacaatcaaaccggatatccttat
ccagactctcgttatgatgctatctgtttccaagacttggaggatgaaggtgtggtgtca
atgacaaccacccctttcccagatattgtccatgaaacacttgcacctggggtgtatcca
ggtctgacaccatcaccaagggaagaggagtctttgggtggagacattgttaccctgtca
ccagactccaaggagacccatgtggttcatgagccaggattcgatctgactgatgccata
atggctcccatgggtgtcctgttccactacagacccatcatgggccggtacactctgtct
tttgtggaggctcaacaggcttgtcgagatattggggctgtgattgcgagtcccccgcag
cttcaggcagcctttgaaaaaggttttcaccaatgtgatgccggctggctcagtgaccag
acagtcaggtatcctatcgtatcacctagagaaaactgtgcaggcaatctatcacaactc
cctggagtcagatcatatgggctgagaccaccaaatgaacaatatgatgtgttttgttac
gtagaacgttcgcaaggtcaggtctttttcaccagtgattatgacagcttctcctacgat
gaggctgtgcagcactgtctcaatctcaacaccacactagctaccactgcacagatatat
gctgcctggagccaaggccttgacaaatgccgtccaggatggctgatggaccgcagtgtc
cgctatccaatcaccacccccaggcccaactgcggaggcggtcaggccggtgtccatacc
atctacgccttctccaaccaaacagggttccccgatgagcactcacgttatgacgcttac
tgttttaaagctgaaactgaaggcagcctcaatgtcacctcagtgattgaggaatacatg
aacaagaccatcatctcagttcataaatttgttccggctgaaacaaccagtgaaaaaatc
actgaaatagaagattttatcaacaagacaatcatcatacctgaacaggctgttccttca
gtgggccctattttgccaccagttcttgttgaagagtctggttctggatcacccgatcat
tcaacaagtggtgaaacctccagtacctccagtgcctgcagtaaaatatctgtggttggg
cagcaaatcattctctgtaaagataccatcataccttctggagaccactctgcctccgga
gggccacgagaggtagaagcaggcagtgctgtcatgttcacatctggagatgtgggtagt
acatctgcatctggatctggggagggatttgatggacaacactctggggtcagtgcatca
ggctccggattcattagtggaagtggagaaattaatgctactggtgatgacttggtcatc
accatagtggatgggaagatggtagagatgatgaaacaggaaaagcttcccgaacaggag
agccatggagggattgataccagcggaacactctgggaaacgagtgcatctggatcagga
gtaatgtctggatctgaagatgtgtctggaataatgtctggatcaggaattgtaatcagc
tcaggagtaatgtctggatcaggatcagcggatggatcaggagttatgattggatctgga
gtaatgtctgggtctggagtaatttcaggatcaggacttctgtcaggatcaggtgttatg
tctggtttaggctctggtgaattgtctggcatctcatttgtcgatcacgatgctgttgat
cttacagctggcctagatgataaacaagaggtgtctggatatatccgatctgatttccac
agtggatttccaagtggttttccatctactgactctggtagtggttctgcctcaggggac
caacatgatggcgacatcatctaccttgcagacactgacatctttgaaattgctgtaccg
cctatgacaagcctacctgaacagggccgaggggttgtggagatcagcggtgaagaaact
ggttcagggagccacagtggcttttctactactttggagagaagcctgaatatgtcagga
agtggtccaccttctgatggttctgggcagtcaggacaggagaaacgggaaagtaatgta
gacccttcagcatctgaaatgagtcccaactcattctacagcagtcctacaacaccattg
gtgtcattacaaactcctgcagttgtgaaggaacccgaaatagtggagggtgtgcaaggt
tgtcctgagggctggttggagttcaagggcagctgttacctccattttgtagaaaaagat
acctggtctgaggctgagcaacgctgtcaggagctcaacgcccacctggttagcattacc
tccccagaggagcagcagtttgtcaactccaatggtcaggattaccagtggatcggactt
aatgacaaagatgtgcaaaatgtgttccgttggacagatggaagtcctctgaattttgag
aactggagggcaaaccaacctgacaactacctcaactctcgggaggattgtgtggtgatg
atctggcatgagggtgggcagtggaatgatgtaccatgtgactactaccttccctttact
tgcaagactggacctgtcatgtgtggacccccccctgaggtgaaacatggccaaccaatg
ggcagcagccaacagaggtatcctgtcaacactatcatccgttaccagtgtgaagaaggc
tacatacagcgacaccaacctgtcatacactgtttgtcagaaggacagtgggaggagcca
caagtggaatgcaccgaagccggtgccaacagtaacaggctacagaaaaggtccctcagg
aggagtaaaggaggcaggagacaggaaacaaggaaacatctctga
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