Takifugu flavidus (sansaifugu): 130535744
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Entry
130535744 CDS
T09160
Symbol
ddb2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03420
Nucleotide excision repair
tfs04115
p53 signaling pathway
tfs04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130535744 (ddb2)
09124 Replication and repair
03420 Nucleotide excision repair
130535744 (ddb2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
130535744 (ddb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfs04121
]
130535744 (ddb2)
03400 DNA repair and recombination proteins [BR:
tfs03400
]
130535744 (ddb2)
Ubiquitin system [BR:
tfs04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
130535744 (ddb2)
DNA repair and recombination proteins [BR:
tfs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
130535744 (ddb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_RIG_2nd
WDR55
EIF3I
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
130535744
NCBI-ProteinID:
XP_056906972
LinkDB
All DBs
Position
13:5029476..5032656
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AA seq
519 aa
AA seq
DB search
MRTCSCRLCKQGHLSSNSVAINTGSRSFRMKNKPNKSNASASTERVTKRSDSSSSTLSKK
LKSKTESWKQEPPKPVAAQRRSVHGSILHYIYQNTLGQSLHSHMRQCLQEPFVRSLSSYH
FHGAASPFDRRVTCLEWHPTHPTTLAAGSKGGDLYLWDFKVPTKMNFVQGNGAGDSIGGM
KFCPMDLSKIYVASGEGRLSLQSFEGHTSTVLATTADCGHDYHNVCFWFCCVDVSVSRQM
LVTGDNVGQLLLLSLDGQKIFSDKLHRAKVTHAEFSSRCDWLLATASVDHTVKLWDLRNI
KDKKSFVHDLPHEKAVNSAYFNPLDCSKLLTTDQYDQIRVYSSSDWSQPQHIIQHPHRQY
QHLTPIKATWHPVYDLIVAGRYPDDRVCPGDEKTVDIYDSNTAELVFQLQDPTGSGIKSI
NKFNSLGDAIGSGMGVSVLIWDRNESLFNDQHEEEETSTSTDSSRSQRRSVQRSGRGRAA
STAGGKLMKKKLASLEETGTKSKTTGGTKEKQTQRRKKT
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacgtgcagctgtaggttatgcaaacagggacatttatcctctaactctgttgct
ataaacactggcagtcgcagtttcagaatgaaaaataaaccgaacaagtcaaatgcatca
gcgtcaacagagagagtgacgaaaagatccgacagctcctcatcgacgctctctaaaaag
cttaagagcaaaacagaatcatggaagcaagaacctccgaagcctgtagctgcccagagg
aggagtgtccatggaagtatcctgcactacatttaccagaatacactggggcagagcctg
cactcacacatgagacagtgtctccaggagccgtttgttcgctcgttatcctcttatcat
ttccacggtgccgccagccccttcgaccgcagggtcacctgtctggagtggcatcccacc
catcccaccactctggcagcagggtccaagggtggagatttgtatctttgggacttcaag
gttcccaccaagatgaactttgtgcaagggaacggagctggagattctatcgggggaatg
aaattctgtccgatggatctttctaaaatctatgtggcttctggtgagggcagattgagc
ctgcagagcttcgagggtcatacgtccactgtgctggctacaactgcagactgcggccac
gactaccacaatgtttgtttttggttctgctgcgttgacgtgtcagtaagcaggcagatg
ttagtgaccggagacaacgtgggacagctgctgctgctgagtttggatggtcaaaagatt
ttcagcgacaagttgcacagagccaaagtgacccacgccgagttcagttcacgctgtgat
tggttgttggccacagcttcagtcgaccacacggtcaaactttgggatctaagaaacatt
aaagacaagaaaagttttgtccatgaccttcctcacgagaaagccgtcaactcagcctat
ttcaacccactcgactgctccaagttactgaccacagatcagtacgatcagatccgcgtc
tactcatcctccgactggtcccagcctcaacacatcatccagcatcctcacaggcagtac
cagcatctcacacccatcaaggccacgtggcacccagtctacgacctgattgtggctggc
cgctaccccgatgaccgcgtttgccccggagatgagaagactgttgatatctatgactcc
aacacagcagaacttgtttttcagctacaggatcccacaggatcagggatcaaatctatc
aataaatttaattctctgggtgatgcgattggctctgggatgggtgtgtcggtgttgatt
tgggacagaaacgagtccctgttcaacgatcaacacgaagaggaagaaacgtcaacgtcg
acagacagttcaagaagccagaggaggagcgtgcagcgctctggccgaggcagagcagct
tccacggcgggtggaaagctaatgaagaaaaaactagcttctctggaagagaccgggacc
aaaagtaaaaccacaggcggcacgaaagaaaaacaaacacagaggagaaaaaagacatga
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