Takifugu flavidus (sansaifugu): 130535860
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Entry
130535860 CDS
T09160
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1-like isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
130535860
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tfs04040
]
130535860
Ion channels [BR:
tfs04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
130535860
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
130535860
NCBI-ProteinID:
XP_056907235
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Position
1:complement(24076337..24130148)
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AA seq
1262 aa
AA seq
DB search
MSKNRDKFNPDPSVHISKMNVIIPFSPDVPCDSNGQRMWWAFLASSMVTFFGGLFIILLW
RTLKYLWTVCCHCNAKKKEVHRVTTGDGIKRTDKDDTTASEVGWMTSVKDWAGVMISAQT
LTGRVLVVLVFALSIGALVIYFIDSSDPIESCQNFYKDFTLQIDMAFNIFFLLYFGLRFI
AANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRSWLGLRFLRALRLIQFSEILQFLNILKT
SNSIKLVNLCSIFISTWLTAAGFIHLVENSGDPWENFQNSQALSYWECVYLLMVTMSTVG
YGDVYAKTTLGRLFMVFFILGGLAMFASYVPEIIELIGNRKKYGGSYSAVNGRKHIVVCG
HITLESVSNFLKDFLHKDRDDVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNPH
DLARVKIESADACLILANKYCADPDAEDASNIMRVISIKNYHPKIRIITQMLQYHNKAHL
LNIPSWAWKEGDDAICLAELKLGFIAQSCLAQGLSTMLANLFSMRSFIKIEEDTWQKYYL
EGVANEMYTEYLSSAFVGLSFPVICEICYVKLKLLLIAIEYKSDQRESSTLINPGNHVKV
QEGTLGFFIASDAKEVKRALYYCKACHDDITDPKRIKKCGCKKSKTPAYKNMSLACCFDC
GRSEQDCPCMPDNVRCNVDFPQHHIPLSAVSVNDYSATLRASKNSYNGYIKSIEEDQQSA
LSPKKKQRNGGMRNSPNSSPKITRHDPLLIPGNEQIDSMDENIKKYDSTGMFHWCQSKDI
EKVILTRSEAAMTFLSGHVVVCIFGDVKSALIGLRNFIMPLRASNFHYHELKHIVFVGSL
EYLKREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQNNIDDASLQDKEC
ILASLNIKSMLFDDSIGVLQANSQGFTPPGMDRSSPENSPVHGLVRQTSVTTGANIPIIT
ELAPLAKAGRKLPVISLSQDKSSGTSIQMITELVNDSNVQFLDQDDDDDPDTELYLTQPF
ACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEGLLAEENALRGGYSTPQTL
ANRDRCRVAQLALYDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRLRDAHLNSQSQCT
KRYVITNPPYAFELVPSDLIFCLMQFDHNAGQSRTSLSHSSHSSHSSSKKSSSVHSIPKT
NRNRSRDTRDKQNAARMNRAGQEKTWFTDEPENAHLRTVTHVSPCKSSSSSIPPIREAED
QC
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaaatcgggataaattcaacccggacccctcggtccacatttccaagatgaac
gtgatcatcccgttttccccagatgtgccctgtgacagcaacggccagcggatgtggtgg
gctttcctcgcctcctccatggtcactttttttgggggtcttttcataatcctcctgtgg
agaactctgaaatatctttggaccgtgtgctgccactgtaatgccaaaaagaaggaggtc
catcgtgtcaccaccggcgatggcatcaagcgcactgacaaggacgacacaacggccagc
gaggtgggatggatgacctcggtcaaagactgggccggagtcatgatatcggctcagacg
ctgacggggcgggtcctggtggtgctcgtgtttgctctcagcatcggagctcttgttata
tacttcatcgattcctccgatcccatcgaatcctgccagaacttctacaaagacttcacg
ctgcagatcgacatggccttcaacatcttcttcctgctgtactttggcctgcggttcatc
gctgccaacgacaagctgtggttctggctggaggtgaactctgtggtggacttcttcacg
gtccccccggtgtttgtgtcggtgtacctgaacaggagctggctcggcttgaggttttta
agggccttaaggctgatacagttctcagaaattttacagtttttgaatattctgaaaaca
agcaactctataaagctggtgaacctgtgttccatcttcataagcacatggctcaccgca
gcaggcttcattcacctggtggaaaactcaggggatccttgggaaaacttccaaaattcc
caggccctttcttactgggagtgtgtgtacctgctcatggttactatgtccactgttggt
tacggagacgtgtacgccaaaaccaccctgggacgcctcttcatggtcttcttcatcctc
ggtggtttggccatgtttgccagctacgtccctgaaatcatagagttaataggaaaccgc
aagaaatatggtggttcctatagtgcggttaatgggagaaagcacatcgtggtctgtggt
cacataacgctcgagagtgtgtccaacttcctcaaagacttcctacacaaggacagggac
gatgtcaatgtagaaattgtttttctccataatatttcccctaatcttgagctggaagcc
ttgttcaagcgccacttcacccaggtggagttctaccagggatccgtcctgaacccacat
gacctggccagagtcaagattgaatcagccgacgcctgtttgatcctggccaacaaatac
tgcgccgaccccgacgcggaggacgcgtccaacatcatgagagtaatctccatcaagaac
taccatccgaaaatccggattatcactcagatgctgcagtaccacaacaaggctcacctg
ctcaacatccccagctgggcctggaaggagggcgacgacgccatttgtctggcggagctg
aagctgggcttcatcgcccagagctgcctggctcaggggctctccaccatgctggccaac
cttttctccatgaggtccttcatcaagatcgaggaggacacgtggcagaagtattacctg
gaaggagtagccaacgagatgtacacggagtacctgtccagcgccttcgtgggcctgtcc
ttccccgtcatttgcgaaatctgctacgtgaagctaaagctgctactgatagcaatagaa
tacaagtcggatcaaagggaaagcagcaccctgatcaaccctgggaaccacgtgaaggtg
caggaggggactctgggcttcttcattgccagcgatgccaaagaagtgaagagggcgctg
tattactgtaaagcctgccacgatgacatcacagaccccaaaaggataaagaaatgcgga
tgcaagaaatccaagacgcccgcctacaagaacatgagcctggcatgttgttttgattgc
ggccgctcagagcaggactgcccttgcatgccagataacgtgcgttgtaacgtggacttc
ccccagcaccacatcccactctccgctgtctctgttaatgattactcagccactttacgt
gcctccaagaacagctacaacggatacatcaaatcaattgaagaggaccaacagtcggcg
ttgtcgcccaagaagaagcagcggaacggaggcatgagaaactccccaaactcttcaccc
aaaataacgaggcacgaccccctcctcatcccggggaacgagcagatcgacagtatggac
gagaacatcaagaaatacgactccactgggatgttccactggtgccagtccaaagacatc
gagaaggtcatcctgacccgcagcgaggcagccatgaccttcctcagcggccacgtggtc
gtgtgcatcttcggagacgtgaaatcggcgctgatcggcctccggaacttcatcatgccc
ctgcgagcgagcaactttcactaccacgagctcaagcacatcgtgttcgtcggctccctg
gagtatttgaagcgggaatgggagacgcttcacaattttccgaaggtctccattttacct
ggcacgccgttgagtcgggcagatctgagagctgtcaacatcaacctctgcgacatgtgt
gtcatcctgtcggccaatcagaacaatattgacgatgcgtcactgcaggacaaagaatgc
atcttggcatcgctcaacatcaagtccatgctgtttgacgacagcatcggggtcttgcag
gctaattcccaaggcttcacaccgccggggatggacagatcgtctccagaaaacagcccc
gtgcacggattagtgaggcagacttccgtcaccactggcgcaaacatccccatcataaca
gaactggcgccgttagcaaaggcaggcagaaagctgcccgtcatctcgctcagtcaggac
aaaagcagtgggaccagcatccagatgataactgagctggtgaacgactccaacgttcag
ttcctggaccaagacgatgacgacgaccccgacaccgagttgtacctcactcagcccttt
gcctgcgggacggcgttcgcagtcagcgtgctggattctttaatgagcgctacatacttc
aatgataatatcctcaccttgatccggacgctggtaacaggcggggcgacaccggagctg
gaagggctgttggcagaggaaaatgcgctgcgggggggctacagcacgccacagaccctg
gcgaacagggacaggtgtcgtgtggcacagctggccctgtacgacgggccctttgctgac
cttggggatgggggttgctatggtgacctcttctgcaaagccctcaaaacctacaacatg
ctgtgctttggcatctatcggctgcgggacgcacacctcaacagtcagagccagtgtacc
aaacggtatgtcataaccaatcccccctacgcgtttgagctggtgccctcggacctgatc
ttctgcctgatgcagttcgaccacaacgcaggccagtctcgaaccagcctctctcactcg
tcacattcgtcccattcctccagcaaaaaaagctcctccgtccactccatccccaaaacc
aaccgcaaccggagcagagacaccagagacaaacaaaatgcagcaaggatgaatagagcg
ggccaagaaaagacgtggtttacagatgagccggagaatgcccacctgaggaccgtcacc
cacgttagcccgtgtaaatcctccagcagctccattccacccatcagagaagcagaagac
cagtgctga
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