Takifugu flavidus (sansaifugu): 130536038
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Entry
130536038 CDS
T09160
Symbol
snx1a
Name
(RefSeq) sorting nexin-1a
KO
K17917
sorting nexin-1/2
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130536038 (snx1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfs04131
]
130536038 (snx1a)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tfs04990
]
130536038 (snx1a)
Membrane trafficking [BR:
tfs04131
]
Endocytosis
Macropinocytosis
Sorting nexins
130536038 (snx1a)
Domain-containing proteins not elsewhere classified [BR:
tfs04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
130536038 (snx1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
Sorting_nexin
NAD_binding_1
MVD-like_N
Motif
Other DBs
NCBI-GeneID:
130536038
NCBI-ProteinID:
XP_056907609
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All DBs
Position
13:5226871..5233755
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AA seq
792 aa
AA seq
DB search
MATSSERSPPPFPDSEDQDVLDNEDVQRDSDEDDLFMSAISPPPTEMDPQLPAVLQPSEM
SVNPLIDPLVDTADIRTEIKPAIDLLGEPSDEFVDLTNNVTGSPDDLASAVNSVAEAAKT
TSEISLEESSDEFVDLTGSEGEAPRGGAVLADVTFEAAPDTSEVTGDDKAVSEAVQEAEE
PPAAPVIDVFGGLSANVQEPQGGNKILDPLVNLLSEAPPAADAKKPSKAAAADLFEDDGS
DLFTEPRQAKSVKQPQKSLFGDPAEDLFGEPLGAASKKTISKEQKNKIATPKASGDVGNI
SGPLKSSNPTEPADIFAEEGVTTAPSIRTTGAVGSKTNGVHSQEDTDLFTEATVELSLDS
PHNVRKKDVGEKPSASASASSLSAATSLTPSPSATLEELEEEEEEEEELEDKFDISVSVK
DPEKIGDGMNAYMAYKVTTQTTLQMFRHKTFTVRRRFSDFLGLYEKLSEKHGPNGFIVPP
PPEKSILGMTKVKVGKEDSSSADFVERRRGALERYLQRVVDHPSLLQDPDVREFLEREDL
PRAVSTQALSGAGFLKMINKATDAVSKMTIKMNESDVWFEEKLQEVESTDQYFRKLHALV
ESLVVHRKELSLNTSSFAKSTAMLGSAEDNTALSRALSQLAEVEDKMEQLHQDQAANDTF
GFAEVIADYIRLLGAVRGSFDQRMKTWQRWQDAQTVLQKKRETEAKLLWANKPDKLQLAK
EEIVEWEAKVTQYERDFERVSATVRKEVIRFEKEKTKNFKSQIIKYLESLLQSQHQLIKY
WEAFLPEAKAIA
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccagctcggagcgcagtcctccgccgttcccggactccgaggaccaagatgta
ctggacaacgaggacgtccagcgggacagcgacgaagacgacctcttcatgagcgccatt
agccctccaccaacagaaatggacccccagctgcccgctgtccttcagcccagtgaaatg
tcagtgaatcctctcattgaccccttagttgacacagcagacatccgaacagaaatcaaa
ccagcgatcgatcttctcggcgaaccctcggacgagtttgtcgacctcacaaacaacgtg
accggctctcccgacgacctggcctcggctgtcaattctgttgcagaagcagcaaaaacc
acgagtgagatctccttagaggagtccagcgatgagtttgtcgacctaactggaagtgaa
ggtgaggcgcccagaggaggagctgttttagccgatgtgacatttgaagcagcgccggat
acaagtgaagtgaccggtgacgataaagctgtaagtgaggctgtgcaggaagcagaggaa
ccccctgctgctccagtcattgacgtctttggcggtctatcagctaacgtgcaggagcca
caaggcggcaataaaattcttgatccgttggtcaacctcctgagtgaggctccgcctgcc
gctgatgccaaaaaacccagcaaggccgctgccgccgatctgtttgaagatgacggaagt
gacctgttcactgaaccgcgacaggctaaatctgtcaagcagccccagaaaagcctcttc
ggcgatccggccgaagatcttttcggcgagccgctcggcgccgcctcgaagaagaccatc
agcaaggagcagaagaacaaaatcgccacacccaaagcttctggggatgtgggcaacatt
agtgggcccctgaaaagcagcaatcccacagaacccgccgatatatttgccgaggaaggc
gtgaccacggcgcccagcatcagaaccaccggcgctgtcggctcaaagaccaatggagtc
cactctcaagaggacactgacttattcactgaagccacagtggagctttctcttgacagt
cctcataatgtgagaaagaaggatgtaggtgagaaaccctctgcatctgcttcggcatcc
tcgctgtcagcagcgaccagcctgaccccgtcaccttctgccaccctggaggagctggaa
gaagaggaggaggaggaagaggagctggaggacaagtttgacatctctgtttctgtcaaa
gacccagaaaaaattggggatgggatgaacgcttacatggcctacaaagtaacaacacag
accacgctgcagatgttccgccacaagaccttcaccgtgaggcggcgcttcagcgacttc
ctcgggctctacgagaagctttccgaaaaacacggaccaaatggattcatcgttccccct
ccaccagagaagagcattctgggaatgacaaaggtgaaggtgggaaaggaggattcttcc
tctgcagactttgtggagagaagaagaggggctttggagaggtatctgcagcgggtggta
gatcacccatctctcctgcaggaccccgacgtcagagagttcctggagagagaagacttg
cccagagcggtcagcactcaggctctgagcggcgccggattcctgaaaatgatcaacaaa
gcgacagatgccgtcagtaaaatgaccatcaagatgaacgagtcagacgtgtggttcgag
gagaagctgcaggaggtggagtctacagaccagtatttccggaagctccacgcgctggtc
gagtccctggttgtccacaggaaagagctgtccttaaatacctccagcttcgccaagagc
acggccatgctgggcagcgcggaggacaacacggctctgtcccgggctctctctcagctg
gcagaggtggaggacaagatggagcagctgcaccaggaccaggccgccaacgacaccttt
ggcttcgccgaagtcatcgcagattacatccgcctgctgggagccgtgagggggtcgttt
gaccagcggatgaagacgtggcagcgttggcaggacgctcagacggtgctgcagaagaag
agggagacggaggcgaagctgctgtgggccaataaaccagacaagctgcagttggccaaa
gaggagattgtggagtgggaagccaaggtgacgcagtacgagagagactttgaacgcgtc
tccgcaacggtgcgcaaggaagtaatccgcttcgagaaagaaaagaccaagaacttcaaa
agtcagatcattaagtacctggagtctttgcttcagtctcaacatcagctgatcaaatac
tgggaggctttcttacctgaagctaaagcgatcgcttaa
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