Takifugu flavidus (sansaifugu): 130536048
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Entry
130536048 CDS
T09160
Symbol
sox1a
Name
(RefSeq) transcription factor Sox-1a
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfs03000
]
130536048 (sox1a)
Transcription factors [BR:
tfs03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
130536048 (sox1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
130536048
NCBI-ProteinID:
XP_056907625
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All DBs
Position
1:12516597..12529967
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AA seq
298 aa
AA seq
DB search
MYNMMMETDLHSPGPQTNTNTGQTGPNSGSKANQERVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKLMSEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKSLLKKDK
YSLAGGLLSGPSGGGGVGLGVGMSSSGVGQRLESPGGHGGSAGTGYAHMNGWANGAYSGQ
VAAAAAAAAMMQEAQLAYSQHPGSGAHHHHSHHHHTHNPQPMHRYDMTALQYSPISNSQS
YMNASPSGYGGISYTQHQGSSVSSSAAMGTLGSLVKSEPSLSVHHGHASVDLDHCRGL
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatgatggaaactgacctccattccccaggcccccaaacgaacacgaac
acggggcaaacggggccgaatagcgggtccaaagcaaatcaggagcgagtgaagagaccg
atgaacgcgttcatggtgtggtctcggggacagcggagaaagatggcacaggagaatccc
aaaatgcacaactcggagatcagcaaaagactgggcgcagagtggaagctgatgtccgag
gctgaaaagcgccctttcatcgacgaggcgaagcggttgagagccatgcacatgaaggag
catccggattacaagtaccgtccaagacggaagaccaagtcgctgctgaaaaaggacaaa
tattcacttgccggtggactgctttctgggcccagtgggggcggtggagttggactggga
gtcggaatgagctcgtctggggtcggacagaggttagagagccccgggggtcacggaggc
tccgccggtacgggttacgcgcacatgaacggctgggcgaacggtgcgtactcggggcag
gtggctgcagccgcagcggcggctgcgatgatgcaggaggctcagctagcctacagccag
cacccggggagcggtgcgcaccaccaccactcacaccaccatcacacgcacaacccccag
ccaatgcaccgctacgacatgacagccctccagtacagccccatctcaaactctcagagc
tatatgaacgcttctccgtccggctacggcggaatcagctacacacagcaccagggctcc
agtgtgtcctcctcagctgccatggggacgttagggtcgctggtgaagtcagagccaagt
ctgagtgtccaccatggccatgcgtccgtggacctggatcactgcaggggcctgtga
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