Takifugu flavidus (sansaifugu): 130536234
Help
Entry
130536234 CDS
T09160
Symbol
dhx8
Name
(RefSeq) ATP-dependent RNA helicase DHX8 isoform X1
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130536234 (dhx8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tfs03041
]
130536234 (dhx8)
Enzymes [BR:
tfs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
130536234 (dhx8)
Spliceosome [BR:
tfs03041
]
Complex C
Other components
Step II factors
130536234 (dhx8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
S1
HA2_N
DEAD
AAA_22
GIPC1_GH2
Flavi_DEAD
AAA_19
ABC_tran
nSTAND3
T2SSE
AAA_30
AAA_16
TsaE
Helicase_RecD
PhoH
AAA_7
Sigma54_activ_2
Motif
Other DBs
NCBI-GeneID:
130536234
NCBI-ProteinID:
XP_056907977
LinkDB
All DBs
Position
1:26769127..26775796
Genome browser
AA seq
1203 aa
AA seq
DB search
MDASDDIKRLEYLSLVSKVCTELENHLGISEKDLAEFVICLAEKHHTFDEFKAVLIENGA
EFTDTLIANLLRLIQTMRSSPSTSKADQTEGKPKSENDNLKDKYPALCQPDAPVWTVSSG
PLGAEDERVAAAAMKQLEMLMPNFSGANAAASGTSAQADCGGGCGQKGSHSCSRSKEREG
EVHPKLRRKRPSRWSDRPPSPPGGSVSSGGDGGREAPVDRPPTDEPVVGDIYNGKVSSIM
QFGCFVQLEGLRKRWEGLVHVSELRKEGRVADVADVVTKSQKVLVKVLSVTGTKASLSMK
DVDQATGEDLNPNRRRMHDPVVREETLRNPDRPAEATVFETQDDSAKRKRLAKITDLEKW
EIKQMIAANVLPKEEFPEFDEETGILPKIDDDEDEELEIELVEEEPPFLRGQTKWSTNMS
PVKIVKNPDGSLSQAAMMQNALAKERREQKQAVRAAEMDLIPTGLHKNWIDPMPDYEGRQ
IAANMRGIGAMPVNLPEWKRKAFGGNQVSYGKKTELSIVQQRESLPIFKLKEQLVQAVHD
NQILIVVGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEYGCRLGQ
EVGYTIRFEDCTSTETVIKYMTHGMLQRECLLDPDMSQYSLVMLDEAHERTIHTDVLFGL
LKKVRRCLLGPERAAGSCKRPPRLLQTIRKRKDMKLIVSSATLDAVKFSQYFFEAPIFTI
PGRTFPVEILYAREPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERM
KSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVILATNIAETSLTIDGIYYVVDP
GFVKQVVYNSKTGIDQLVVTPISQAQAKQRSGRAGRTGPGKCYRLYTERAYRDEMLTTNV
PEIQRTNLASTVLSLKAMGVNDLLSFDFMDSPPMETLITAMEQLYTLGALDDEGLLTRLG
RRMAEFPLEPMLCKMLIMSVHLGCSDEMLTIVSMLSVQNIFYRPKDKQALADQKKTKFFQ
LEGDHLTLLAVYNSWKNNKFSNAWCFENFIQARSLKRAQDIRKQMLSIMDRHKLDVVSCG
KASVQVQKAICSGFFRNAARKHPQDGYRTLIDQQVVYLHPSSTLFNRQPEWLVYHELVLT
TKEYMREVTTIDPRWLVEFAPAFYRVGDPTRLSRQKRQQKLEPLYNRYEEPNAWRISRAF
RRR
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atggacgcttcggacgatattaaacgtctggaatatctgtctttggtgtctaaggtgtgc
acggagttggaaaatcatctgggaataagcgagaaagatttagctgaatttgtcatctgt
ttggcggaaaagcaccacactttcgatgagttcaaagcagttttaatcgagaatggagca
gaattcacagacacgctcatcgctaatctactcagacttattcaaacgatgcgatcttca
ccatccaccagtaaagcagatcagactgaaggaaagccaaagagtgaaaatgacaatctg
aaagataaatatccagctttatgtcaaccagatgctccagtgtggacggtttcaagtggc
cccttgggtgcagaagatgagcgggtcgcagcagcggccatgaagcagctggagatgctg
atgccaaacttcagtggagcaaatgctgctgcgtcgggcacgtctgcgcaggccgattgt
ggtggggggtgtggacagaagggaagtcactcttgctccaggtccaaagaacgcgaggga
gaggtccaccccaagctcagaaggaaacggccttctcgctggagcgatcgtccacccagc
ccacctggtgggagcgtcagttcagggggtgatggtgggcgggaagcacctgtagaccga
ccccctacagacgagcctgtggttggagacatctacaacggaaaagtcagcagcattatg
cagtttggctgctttgttcagctggagggtctcaggaaacggtgggaaggtctggtgcac
gtctctgagctgcgtaaagagggacgagtcgctgatgtggctgacgtggtcaccaaaagt
caaaaggttctggtcaaagtgctgtcggtcaccggaaccaaagccagcctgagtatgaag
gacgtggatcaggcgacgggcgaagacctgaaccccaaccggagacgaatgcatgaccct
gtggtcagagaggaaacgctgaggaacccggatcgtcctgctgaagccaccgtgttcgaa
acgcaggacgactcggcgaaacgcaaacgactggcgaagatcacagacctggagaagtgg
gagatcaaacagatgatcgcggccaacgtacttcccaaagaagagttcccggagtttgac
gaagagacggggatccttcccaaaatagacgacgatgaggatgaagagctggagatcgag
ctggttgaggaggagccgcctttcctgaggggacagacgaaatggagcaccaacatgagt
ccagtcaagatagtgaagaacccggacggctcgctctcgcaggcggccatgatgcagaac
gccctcgccaaagagaggcgggagcagaagcaggcggtgcgcgcggcggagatggacctc
atcccgaccggcctccacaagaactggatcgaccccatgccagactatgaaggaaggcag
atcgccgccaacatgaggggcatcggcgccatgcccgtcaatctcccggagtggaaaaga
aaggccttcggcgggaatcaggtgtcgtacgggaagaagacggagctttccatcgtgcag
cagagggagagtcttcccatcttcaagctgaaggagcagctggtccaggccgtccacgac
aaccagatcttgattgtcgtcggggaaacgggctcggggaagaccacccagatcacccag
tacctggcggaggccgggtacacctcgcgggggaagatcggctgcacgcagccccgccga
gtggccgccatgtcggtggccaagagggtgtctgaggagtacggctgccgtctgggccaa
gaggtgggctacaccatccgctttgaggactgcaccagcacggagacggtgatcaagtac
atgacccacggaatgctgcagagggaatgtctgctggaccccgacatgagccagtattcc
ctcgtcatgctggacgaagcccacgagaggaccatccacaccgacgtgctctttggcctc
ctgaagaaggtgagaaggtgtctgctcggacccgaacgggccgccggctcctgtaaacgc
ccccctcgtctccttcagaccatccggaaacgcaaagacatgaagctgatcgtgtcgtcc
gcgacgctggacgccgtcaagttctcccagtacttctttgaagctcccatcttcaccatc
ccgggaagaaccttccccgttgagatcctgtacgccagagaacccgagacggactatctg
gacgccagtctgatcaccgtcatgcagatccacctgacggaacctccaggagacatcctg
gtgttcctgaccggacaggaagagatcgacacggcctgcgagatcctgtatgagcgtatg
aagtcgctggggcctgacgttcctgagctgatcatcctcccggtttattccgctctgccc
agcgagatgcagaccagaatcttcgacccggcgccgccgggcagcagaaaggtgatcctg
gccaccaacatcgccgagacgtctctgaccatcgacgggatctactacgtggtcgacccc
ggcttcgtcaaacaggtcgtctacaactccaagacgggcatcgaccagctggtggtgacg
cccatctcacaggctcaggccaagcagaggtcgggccgagccggcagaaccggaccgggg
aagtgttaccgtctctacaccgagagggcctacagggacgagatgctgaccaccaacgtg
cccgagatccagaggaccaacctggcgagcacggtgctgtctctgaaggcgatgggcgtc
aacgacctgctgtccttcgacttcatggactccccccccatggagacgctgatcacggcc
atggagcagctctacacgctgggggctctggatgacgaggggctgctcacgcggctgggg
aggaggatggcagagttccccctggagcccatgctgtgcaagatgttgatcatgtccgtc
catctgggctgcagcgacgagatgctgaccatcgtctccatgctgtcggtgcagaacatc
ttctacagaccaaaggacaaacaggctctcgccgaccagaagaagacaaagttcttccag
ctggagggggaccacctgacgctgctggccgtctacaactcctggaagaacaacaagttc
tccaacgcctggtgtttcgagaacttcatccaggcgcgctccctgaagagggctcaggac
atccgcaagcagatgctgagcatcatggacaggcacaagctggacgtggtgtcctgtgga
aaagcgtcggtccaggttcagaaagccatctgcagcgggttcttcaggaacgccgccagg
aagcacccgcaggacgggtaccgcaccctgatagaccagcaggtggtgtacctgcacccc
tccagcacgctcttcaaccgccagcccgagtggctggtttatcacgagctggtgctgacc
accaaggagtacatgcgggaggtgaccaccatcgacccccgctggctggtggagttcgcg
ccggcgttctacagggtcggcgacccgactcggctcagccgccagaagaggcagcagaaa
ctggagccgctctacaaccgctacgaggagcccaacgcctggaggatctcccgcgccttc
aggcgccgctga
DBGET
integrated database retrieval system
