Takifugu flavidus (sansaifugu): 130536248
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Entry
130536248 CDS
T09160
Name
(RefSeq) transcription factor Sox-6-like isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfs03000
]
130536248
Transcription factors [BR:
tfs03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
130536248
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
130536248
NCBI-ProteinID:
XP_056908021
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All DBs
Position
13:926033..958774
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AA seq
770 aa
AA seq
DB search
MFQVRPEDEHQSRRMSSVRTTLPFLPPSEEGITAGQDNLPWTNELKEAPSPLSHDQHRTE
EVQPIREKLANEWEEPAEVDNDSKKMSTYSSTSPSKPDESCRDPGDPVIHFGTPERRKGS
LADVVDSLKQKKLVELTKTEQEESDCVERLLSKDWRERVDHLNATELLGDVKGQTVKPST
EAFWGQNHQMFHRTPESLEEKEQQLSNMIGQLIGLREQLLSAHDEQKKMAASQLEKQRQQ
MELARQQQEQIARQQQQLLQQQHKINLLQQQIQVQGHMTPMMIPVFPHDQRSLVAATAAQ
QGFLFPQRMSYKPGDNYPMQFIPSTMAAAAAGLSPLQLQQLYAAQLASMQISQGTKMTPP
SFSPLSPSALKSEKRPASPVGHIKEEVSTQPLNLSARSQTAETSPTHSFISGNKSSPTPL
VKGRVPSPAPNKGRNTSLDILSSLNSTALFGDQDAVMKAIQEARSMREQIQREQLNQQPS
LEAKLSALSNMSLSNGSKERLHYEALSQHLGKLGEDAGKMVHRVIDLTRPEDLEGNDISE
ARVFRESRGRNGNEPHIKRPMNAFMVWAKDERRKILQTFPDMHNSNISKILGSRWKAMTN
QEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIIDGKKLRIGEYKQLMRSRRQEMRQF
FVGPPSSVPLANSPSGLPVYPGAITMAKAATQSPQLTSDCSSNSASPEPAIPVIHSAYRI
KSETGGRSSGMAGLDPPSDRTIGDDTDMYDEFDEEPKSDYSSDHETIGAN
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgttccaggttcgcccggaggacgaacatcaaagcagaaggatgtcttctgtcagaacc
acgcttcctttcctccctccatccgaggagggcatcactgctggtcaggacaatctcccc
tggaccaatgaactgaaggaggcgccgtctcccctgtcacatgaccaacaccgcacagag
gaggtccaaccaatcagagagaagctagcaaatgagtgggaggagcctgctgaagtggac
aatgacagcaaaaaaatgagcacctacagttctacctctccctccaagccagatgagtcc
tgcagggatccaggggatccagtgatccactttggtactccagaacgccgaaaaggaagt
ctggctgacgtggtagactcgctgaaacagaaaaaactggtggagttgaccaagacggag
caagaagagtcggactgtgtggagaggctgttatccaaagactggagggagcgagttgac
catctgaatgccacagaattgctaggagatgtcaaaggtcagacagtcaaaccttcaaca
gaagcattctggggccagaaccatcagatgttccacagaacaccggagtcactagaagag
aaggagcaacaactgtccaacatgatcggtcagctgatcggtttaagggagcagcttctc
tccgcccacgacgagcagaaaaagatggccgcctctcagctggagaagcagaggcagcag
atggagctggcccgccaacagcaggagcagattgccagacagcagcagcagctcctgcag
cagcaacataagatcaacctcctgcagcagcagattcaggttcagggtcacatgactccc
atgatgattcctgtctttcctcatgaccagcgatctctggttgctgccaccgctgcccag
cagggcttcctgttcccacaaagaatgtcctacaaaccaggtgacaactaccccatgcag
tttattccatctacaatggcggcagcggcggcgggccttagcccgctacagctgcagcag
ctttatgcagctcagctggccagcatgcagatctcacagggaaccaagatgacccccccc
tccttcagccccctctcaccgtccgccctgaagagcgagaagaggccggcaagtcccgtc
ggtcacattaaggaggaagtgtccacgcagccgttgaacctctccgccagaagccagaca
gcagaaacatccccgactcacagcttcatctctggaaacaagagcagcccgacgccactg
gtcaaaggtcgcgtcccaagccccgcccctaacaagggcagaaacacgtctctcgacatt
ctatccagcctcaactccacagcgttgtttggagaccaggacgcggtgatgaaggccatc
caagaggcccgcagcatgagggagcagatccagagggagcagctaaaccagcagcccagc
ctggaggccaaactgtcagctctcagcaacatgagcctcagcaacggcagcaaggaacgg
ctgcactacgaagcgctgagtcagcacctggggaagctcggagaggatgctgggaaaatg
gtccaccgagtcattgacctgaccaggccggaggatctggaagggaatgacatctccgag
gcccgagtgtttcgggagtccagaggccgtaacggcaatgagccacacatcaagagaccc
atgaatgccttcatggtgtgggccaaagacgagaggaggaagatcctgcagaccttcccg
gatatgcacaactccaatatcagcaagatccttgggtctcgctggaaagccatgaccaac
caggagaagcagccgtactacgaggagcaggcccgcctgagcaagatccacttggagaag
taccccaactacaagtacaaaccccggcccaagagaacctgcatcatcgacggcaagaag
ctgcggattggagagtacaagcagctgatgcggtcacggcgtcaggagatgaggcagttc
ttcgtggggcctccgtcatctgttcctcttgcaaacagcccgagtggtttacctgtttac
ccaggcgccataaccatggcaaaagcagccacacaatccccgcagctgacctcagactgc
tccagtaactcagccagtccagaaccggccatccctgtcattcacagcgcgtacagaatc
aaatctgagaccggtggcagaagcagtgggatggcgggcttggatcctcccagcgaccgc
accatcggggatgacacggacatgtacgatgagttcgatgaggagcccaagtcggactac
agcagcgaccacgagaccatcggcgccaactga
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