Takifugu flavidus (sansaifugu): 130536280
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Entry
130536280 CDS
T09160
Symbol
lrrc4ca
Name
(RefSeq) leucine rich repeat containing 4C, genome duplicate a
KO
K07523
netrin-G1 ligand
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
130536280 (lrrc4ca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tfs04515
]
130536280 (lrrc4ca)
Cell adhesion molecules [BR:
tfs04515
]
Immunoglobulin superfamily
NGL family
130536280 (lrrc4ca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
V-set
LRR_14
Ig_2
LRR_9
LRRNT
LRR_NXF1-5
Ig_6
DUF7617
Sp38
DUF6821
Syndecan
Motif
Other DBs
NCBI-GeneID:
130536280
NCBI-ProteinID:
XP_056908096
LinkDB
All DBs
Position
13:complement(2385165..2458972)
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AA seq
647 aa
AA seq
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MLNKMTSFQQQQMMRGPRWNRALSDPLFVLLLALQLLVVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLRDVPDGISTNTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRKIEHGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVTSLRRLDL
GELKRLSYISEGAFEGLSNLRYLNLGMCNLKEIPNLTPLVKLDELEMSGNQLSIIKPGSF
KGLIHLQKLWMMHAQIQIIERNSFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLH
HNPWNCNCDILWLSWWLKEMVPANTTCCARCSSPTHYKGRYIGELDQNYFHCYAPVIVEP
PADLNVTEGSAAELKCRASSLTSVSWITPNGSIMTHGAYKVRISVLNDGTLNFTNVTMQD
TGTYTCMVSNSAGNTTASATLNVSSTENSSFSYFTTVTVETIETPHNDGFTTTVQQKAGP
TPSTAAWESVSITSTTTTTARMPLFTRATEKAYTVPVTELVGDGSLNGLDEVMKTTKIII
GCFVAITLMAAVMLIIFYKMRKQHHQQNHHAPTRTIEIINVDEDCVTGGPGMEGHLTLPP
LEHEHLNHYNTYKNAYNHATINSIHSSAHEPLLIRASSKDNVQETQI
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgttaaacaagatgacctcctttcagcagcaacagatgatgcgaggtcctaggtggaac
cgggccttgtccgaccctttgtttgtgctgctcttggccctccagctgctggtggtggca
gggctggtccgtgcgcagacgtgcccctccgtctgctcctgcagcaaccagttcagtaag
gtgatctgcacccggcggggcctgcgggatgtccctgacgggatctccaccaacacgcgc
tacctgaatctgcaggagaacctcattcaggtcataaaggtggacagcttcaagcacctc
agacatttggagatcctgcagttgagcaaaaaccacatccgcaaaatcgagcacggggct
ttcaacgggctggccagcctcaataccttggagctttttgataaccggctcaccaccatc
ccaaatggggcgttcgagtacctgtccaaactaaaggagctttggctgaggaacaacccc
atagagagcattccgtcttatgctttcaacagagtgacctcgttacggcggctggacctt
ggggagctcaagcgtctctcctacatttctgagggagcttttgaagggctgagcaatctg
cgctacctaaacctggggatgtgcaacctgaaggaaattcccaaccttactcccctagtg
aagctagatgaactagagatgtcagggaaccagctgtctatcatcaaaccaggctctttt
aaaggcctcatccatttacagaagctgtggatgatgcatgcccagatccaaatcatagag
aggaactcttttgacgacctgcagtccttagtggagctcaacctagcccacaacaacctc
acccttttgccccatgacctcttcacccctctgcaccacctggagagggtgcatttgcac
cacaacccatggaattgtaactgtgacattctgtggctcagttggtggctgaaggagatg
gtcccggcgaacaccacctgctgtgcccgctgcagctctccaacgcactataagggacgg
tacattggcgagctggaccagaactactttcactgttatgctcctgttattgtggagccc
ccagcagacctaaatgttacggagggaagcgccgccgagctgaagtgccgagccagctcc
ttgacctccgtcagctggattacgcccaatggttccatcatgacacacggcgcgtataag
gtcagaatctccgtgctgaatgacggcacgctgaacttcaccaacgtcaccatgcaggac
acgggcacgtatacgtgtatggttagcaactctgcgggtaacacgacagcatcagcaaca
ctcaacgtgtcctccacagagaacagcagcttcagctacttcaccacggtcacggtggag
accatagaaacgccacacaacgacggctttaccaccacggtgcaacagaaggcgggtccc
accccttccactgcggcgtgggagtccgtttctatcacctccacaaccacgacgacggcc
cgaatgccccttttcacccgcgccacggagaaggcctacaccgtccctgtgacggagctg
gtgggggacggctcgctcaacggcttggacgaggtcatgaagacgaccaagatcatcatc
ggctgcttcgtggccatcacgctcatggcggccgtgatgctgatcattttctacaagatg
cggaagcagcaccaccagcagaaccaccacgcgcccacacgcaccatcgagatcatcaac
gtggatgaggactgcgtgacaggggggcccggcatggagggccacctgactctgccccct
ctggaacacgagcacctcaaccactacaacacgtataagaacgcgtacaaccacgccacc
atcaactccatacacagctctgcacacgaacctttgctaatccgggccagctcaaaagac
aacgtacaagagacccaaatctaa
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