Takifugu flavidus (sansaifugu): 130536715
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Entry
130536715 CDS
T09160
Symbol
rag1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
130536715 (rag1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfs04121
]
130536715 (rag1)
Enzymes [BR:
tfs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130536715 (rag1)
Ubiquitin system [BR:
tfs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130536715 (rag1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAG1_imp_bd
RAG1_ZnH2
RAG1_RNase_H
RAG1_C
RAG1_pre-RNase_H
RAG1
RAG1_ZnC2
RAG1_DNA-bd
zf-C3HC4_2
zf-RING_10
zf-C3HC4_3
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_4
zf-RING_2
U-box
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
130536715
NCBI-ProteinID:
XP_056908814
LinkDB
All DBs
Position
13:2209038..2215598
Genome browser
AA seq
1061 aa
AA seq
DB search
MAEECLETDDPRSTMPAELHHPLSKYPQWKFKLFRVKSMEKAPLPTETSPEKRVLLGLSA
PPAPDTLLGNGMAPGSVMKLCLGGKSKENVEGLSMRVDMKLQEMDAHMNKLRCLCRLCGM
MLRKVKGPVHDVQGNLDNASKGALRKMGCKLTSWPEVIHKVFKVDVTEDLEAVHPLFFCH
HCWMTAIRGGGVCSLSRTRVRAWKPHSSLCELCSPRKVSFERTRRKRRKGVPRALSLAKR
TRCDNSDGKADGERRNLERPALRDWPKSRDQREQWVRSITHCQRDHLSINLISEKLPEDF
LFSFTCVVCDHLLSDPVQPPCGHLSCRSCIKKYSYVLGPHCPVCNLRCTPDNFAPPAKAF
LAALQALPLLCPRSGCGREVRLDSFKAHYLDHELEEHDTDKHLPECDNYLLINKGGRPRQ
HLLSLTRRAQKHRLKDLKNLVKTFADKEEGGDLKSVCLTLFLLALRSANEHRQADELEAI
MQGRGSGLHPAVCLAIRVNTFLSCSQYHKMYRTVKATTGRQIFQPLHSLRAVEKELLPGF
HQFEWQPPLRNVSTSCSVGIINGLSGWTSSLDDSPAETITRRFRYDVAIVSALKDLEEDI
MEGLRENEMEDSNCTLGFSVLIKESCDGMGDVSEKHGGGPLVPEKAVRFSFTIMSVSIKA
EGEKDKVIFTEPKPNSELSCKPLSLMFVDESDHETLTAIMSPIIAERDAMKESRLIVSIG
GLPRSFRIHFRGTGYDEKMVREMEGLEASGSTYICTLCDSSRAEASENMVLHSITRSHAE
NLERYEIWRANPFSESVDELRDRVKGVSAKAFMETHPTLDALHCEIGIATEFYKIFQDEI
GEVYQKVNPSREERRGWRAALDKQLRKSMKLKPVMRMNGNYARRLMSLEAVELVCELVPT
EGRREALRELMRLYLQMKPVWRATCPTKECPDQLCRYSFNSQRFAELLSSSFKYRYNKKI
TNYLHKTLAHVPEIIERDGSIGAWASEGNESANKLFRRFRKMNARQSKAFELEDVLKHHW
LYTSKYLQNFMNAHKDSAKALQASIDPVLSKDDEDMAGIDF
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagagtgtctggaaacagatgaccccaggtcgacaatgccggccgagctccac
catcctctctctaagtaccctcagtggaagtttaaactgtttagggtcaagtccatggag
aaggcccccctgcccaccgagacttcgcctgagaagagagtcttattaggactctccgct
cctccagctccagatacattgttaggtaacggcatggctccagggagtgttatgaaattg
tgccttggggggaaaagcaaggaaaatgtagagggcctgagcatgagggtggacatgaag
ttacaggaaatggatgctcacatgaacaaactcagatgcttgtgtcgtctttgtggaatg
atgctaagaaaagtcaaaggaccagtacatgatgttcaggggaatctggataatgcaagc
aaaggtgcactgcgtaaaatgggctgcaagctgaccagctggccagaagttatccataaa
gtcttcaaagtggatgtgacagaggaccttgaagctgttcaccctctttttttctgtcac
cactgttggatgactgccatacgtggaggtggtgtctgcagcttatctagaacaagagtc
cgtgcatggaaaccccactcttccctctgtgagctttgctctcccaggaaagtttcgttc
gagcgcactaggaggaagaggaggaagggtgttcccagagcgctcagtctggcaaaaaga
accaggtgcgacaacagtgacggcaaagctgatggagagagacggaatctggagcgtcct
gcactcagggactggccaaaatccagggaccaaagagagcagtgggtgaggagcattacc
cactgccagagagaccacctcagtatcaacctgatatcagagaagctccctgaagacttc
ctgttttcattcacctgtgtggtgtgtgatcacctgctctccgatcctgtgcaaccccct
tgtggacacctctcctgccgcagctgtatcaaaaagtatagctatgtcctggggcctcat
tgtccagtttgcaacttacgctgcacccctgacaatttcgccccgcccgccaaagccttc
ctagcggccttgcaggccctgcctcttctttgccccagaagtggctgtggtagggaggta
agactggactcatttaaagcccactatctggaccatgagctggaggaacatgatacagac
aagcatttgccagaatgtgacaactacctgctgatcaataaaggaggaagaccccgtcag
cacttactctcgttaacccgccgtgcccaaaaacatcggctgaaggacctgaagaacctc
gtgaagacatttgcggacaaagaggaaggcggtgacctgaagtctgtgtgcctgaccctg
ttcctgctcgcactgagatcagcgaatgaacaccggcaggcagatgagcttgaggctata
atgcaaggcaggggctctggtttgcatcctgcagtatgcttggccatccgggtcaacacg
ttcctgagctgcagccagtatcataaaatgtaccgaactgttaaagccactactggccgc
cagatctttcagcccctacacagcctgcgagctgtagaaaaggagcttcttcctggattt
catcaatttgaatggcagccgcccctcaggaatgtgtccacatcatgcagcgttgggatt
atcaacgggctttctggatggacttcctcattggatgattctccagctgaaactatcact
cgtaggttccgctatgatgtagcaatcgtgtcagcattgaaagacctcgaagaggacatc
atggaagggttgagagaaaatgagatggaggatagcaattgcacattgggtttcagcgtc
ctgatcaaagagtcttgtgatggtatgggtgatgtcagtgagaagcatggaggcggtcca
cttgtcccagagaaggctgtgcgtttctcttttactatcatgtctgtctccatcaaggca
gaaggcgagaaggataaagtcatcttcactgaaccgaaaccaaactcagagctgtcctgc
aagcccctttccctgatgttcgtggatgagtcagaccatgagacactcacggctatcatg
tcacccataattgcagagcgggatgcaatgaaagagagcagactcattgtgtccattggc
ggattgccgcgctccttccgcattcatttccgaggcacaggatacgatgaaaagatggtg
cgtgagatggagggcctggaggcctcagggtccacgtacatctgcacgctttgtgattcc
agtcgtgcagaagcttctgaaaacatggtactgcattccatcacccgcagtcacgctgaa
aacttagagcgctatgaaatatggcgagccaaccccttttctgaatctgtggatgagctg
cgagacagagtgaagggggtctctgccaaggcatttatggagacccatcccactctggat
gcactgcactgtgagattggcatcgccactgaattctacaaaatcttccaggatgagatc
ggggaagtgtaccaaaaggtgaaccccagtcgggaggagcgacgcggctggagggcagcc
ctggataaacagctgaggaagtccatgaaactcaaaccagtaatgaggatgaatgggaac
tacgcacgccggctcatgagcctggaggctgtggagttggtgtgtgagttagtgcccaca
gaagggaggagggaggccctgagggagctcatgaggctctacctccagatgaaacccgtg
tggcgtgccacctgccccaccaaggagtgcccggaccagctgtgccgttacagctttaac
tctcagcgctttgctgagctcctctcctcctctttcaaatataggtacaataaaaaaatc
accaattacctccacaaaaccctcgcccatgttcccgaaatcatagagagagatggatca
ataggagcatgggcaagcgaggggaatgagtcagcaaataaactgttcaggcgtttccgg
aagatgaacgcgcgtcagtcgaaagcctttgaactagaggacgtgttaaaacatcactgg
ctctacacctccaagtatttacagaactttatgaacgcgcacaaagactcggctaaagca
ctgcaagctagtattgaccctgtgctgagcaaagatgatgaggacatggcaggaattgac
ttttga
DBGET
integrated database retrieval system
