Takifugu flavidus (sansaifugu): 130536781
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Entry
130536781 CDS
T09160
Name
(RefSeq) PDZ domain-containing RING finger protein 4-like isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfs04121
]
130536781
Enzymes [BR:
tfs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130536781
Ubiquitin system [BR:
tfs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
130536781
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
130536781
NCBI-ProteinID:
XP_056908944
LinkDB
All DBs
Position
13:complement(6915511..6973834)
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AA seq
914 aa
AA seq
DB search
MEGKLSPAALRALRRDAKLSAHSLSGAFTPSDAPAPTLRADTPSPHAEPDPMPETKPGPG
EGVCQRGCGLSLSGDAEHCCVDALRSVTDALEGRSAGLEHQVRMARLRWNRREQWLLARV
TALQNEAQLAALQYQQRLHQYMVHIGSIAEQVNRYCQDGSRLASGSDETSDGGARAGQQE
QLSSPQVNGKELSKSSHEESAEAFRAVKEPVVVQVIRRTPSGRPHGSPQEIRVVDVCTQT
DITFEHIMALAKLRPSTPPVPDVCPFLLSDSCHSLHTMDQDYYGGTGYLSPVPADGERTE
DFEYEEVELCRVNSQEKLGLTLCYRTDEEEDVAIYVSEISPNSIAARDGRIREGDRILQI
NGQDVQNRQEAVAALSSDECTSIVLLVARPETQLEEAWLDDEHSEFLEQLKMEMLEEQQR
EEMELAALQEAQEYEQRAEEDKPTCSTLPHHKDGILSLRDRIQSSEHNVLAHIQRRLSQC
LRDTQDCPAGSTRLEDEDEGEAEGDRFQQLLELKCQIHNGGEYDLFYSHRSTIECSVAEQ
DGMQHELRMLNEELRSIELECQNIMQAHNLRKNTCPPSGGQSAPATRHGSQRGETTKGKL
TDTNDRLEKSDKDSSSAYNTAESSRSTPLAMDRSPEHSLQRMVSLTNQRNLCTGLAAGRS
LSSSPVPAGGAPLPGKSSSPELSQTPQPEDESSRNLKACVSLNPYFSPSHSSQQRQVNIP
AHARHYQSYMHLIQQRSAVEYAQSQLSLLSVCKEPQRPVNEPKMEWKVKIRSDGTRYITK
RPVRDKILRERALKIKEERSGGMTTDDDAMSEMKMGRYWSKEERKQHLVRAKEQRKRREF
MQRSRLESLRENPQSSSESRKEVSIIELSHRKMMKKRNKKILDNWMTIQELMTHGAKAPE
GAKVHNAFLSVTTV
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atggaagggaagctcagccccgccgctctccgtgcgctgcgcagagacgccaaactgtcg
gcgcactcgctctccggtgccttcactccttctgacgctcctgcgccaactctacgcgct
gacaccccgagtcctcacgcagaaccggatccaatgcccgaaacaaagccaggaccgggt
gagggtgtctgccagaggggatgcggactctcgctgtccggggacgcggagcactgctgc
gtggacgcgctgcgctccgtcaccgacgcgctggagggaagaagcgcgggtttggagcac
caagtccggatggcgaggctcaggtggaacaggcgggagcagtggctgctggcccgggtc
acggctctgcagaacgaggcccagctcgctgctctgcagtaccagcagaggctgcaccag
tacatggtccacatcggcagcatagcagagcaggtcaacaggtactgccaggacggatcc
agattggcctcaggatcggacgagacgtcggacgggggggcacgtgctgggcagcaggag
cagctctcctcacctcaggtgaatgggaaggagctgtccaagtccagccatgaggagagc
gcggaggccttccgggctgtcaaggagcccgtggtggtgcaggtcatcaggcgcaccccc
agcggacgcccccacggttcccctcaggagatccgggtggtggacgtgtgcactcagacg
gacatcaccttcgaacacatcatggcgctggcgaagcttcgaccttcgaccccgccggtg
ccggacgtctgccccttcctgctttctgacagctgccattctcttcacacaatggaccag
gactactacggaggaacgggctacctctcgcctgttcctgctgacggagagaggacggag
gactttgagtacgaggaagtggaattgtgccgagtcaacagccaggagaagctagggcta
acgctgtgctacaggacggacgaagaggaagacgtggcgatctacgtcagcgagatcagc
ccaaacagcatcgcggccagagacgggcgcatccgcgagggggaccggattttacagatt
aacgggcaggatgtccagaacaggcaggaagccgtggcggcgctctccagcgacgagtgt
acgagcatcgtgctgctggtggcgagacccgaaacccagctggaggaggcctggctagac
gacgagcacagcgagttcctggagcagctgaagatggaaatgctggaggagcaacagagg
gaggagatggagttggctgccttacaggaggcgcaagagtacgagcagagagcggaggag
gacaagcccacctgctccaccctccctcaccacaaagatggaatactgagtctgcgagac
agaatccagagctcggagcacaacgtcctcgcgcacatccagagacgtctgtcccagtgc
ctgagggacactcaagactgtcccgccggctccacgcggctggaggacgaggacgagggc
gaggccgaaggcgaccgtttccagcagctcttggagctcaagtgtcagatccacaacggc
ggcgagtacgacctcttctacagccaccgcagcaccatcgagtgcagcgtggccgagcag
gacggcatgcagcacgagctgcggatgctcaacgaggagctgcgcagcatcgagctggag
tgtcagaacatcatgcaggcccacaacctccgtaagaacacgtgccctccctccggcggt
cagtccgcccccgccaccaggcacggcagccagcggggggagaccacaaaggggaagctg
accgacactaatgacaggctggagaagtccgacaaagacagctccagcgcctacaacacc
gccgagagctcccgcagcacccctctggccatggaccgctccccggagcactcgctccag
cggatggttagcctcaccaaccagaggaacctctgcaccggcctcgccgccggccgctcc
ctcagctccagcccggtcccggcgggcggcgctccgcttccgggcaagagcagcagcccg
gaactgagccagactcctcagcccgaggacgaaagcagcaggaacctaaaggcgtgcgtt
tcgctgaacccttacttctccccgtcccacagttcccagcagcggcaggtgaacatccca
gcgcacgcccgccactaccagagctacatgcatctgatccaacagcgctccgccgtggag
tacgctcagagccagctgagcctcctcagcgtctgcaaggagccccagaggcccgtcaac
gagcccaaaatggagtggaaggtcaagatccgcagcgacggcacgcgctacatcaccaag
aggcccgtcagggacaagatcctgagggagcgcgccctgaagatcaaggaggagcggagc
ggcggcatgaccaccgacgacgacgccatgagcgagatgaagatggggaggtactggagc
aaagaggagcgcaagcagcacctggtccgggcgaaggagcagaggaagaggcgagagttc
atgcagcgaagtcggctggagagcctgcgggagaacccccagagcagcagcgagagccgc
aaagaggtcagcatcatcgagctgagccacaggaagatgatgaagaagaggaacaagaag
attctggacaactggatgaccatccaggagctgatgactcacggggccaaggcccccgag
ggggccaaggtccacaatgcttttctatcagtcaccactgtataa
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