Takifugu flavidus (sansaifugu): 130536888
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Entry
130536888 CDS
T09160
Symbol
nedd1
Name
(RefSeq) protein NEDD1 isoform X1
KO
K16547
protein NEDD1
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tfs03036
]
130536888 (nedd1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tfs04812
]
130536888 (nedd1)
Chromosome and associated proteins [BR:
tfs03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
130536888 (nedd1)
Microtubules and associated factors
gamma-tubulin ring complex
130536888 (nedd1)
Cytoskeleton proteins [BR:
tfs04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
130536888 (nedd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
WDR55
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
EIF3I
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_LRRK2
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_IFT122_1st
Beta-prop_VPS8
Beta-prop_SPT8
Beta-prop_NWD2_C
VPS8_N
Motif
Other DBs
NCBI-GeneID:
130536888
NCBI-ProteinID:
XP_056909108
LinkDB
All DBs
Position
13:1153504..1162467
Genome browser
AA seq
660 aa
AA seq
DB search
MEELNRLVSTGDNVKMWDAFSMAPLEQFNPHSISHPVAQACWSSNNQYLVSASSSGDKLV
VSSLKSTPVPVVEMAEGKRQTRVCLSSSSQFLVSGGLDHCVHIWDLKTKRLHRSLKDHKE
EVTCVSFNANDSSVASGSTSGDLVLHSLTTNVSSKPFGHGSNQPIHDLRLSPLKRSLLGS
ISDSGSMVLWDANTQKEIHVFDSAHKAPGCGLVFSPASELLVVSVGLDKKIICYDTVSKI
FLKSIRVESPLTAVDFTLDGTGLVVGSTQGKIYHYDLRNSSAPTRITVAHKTSVTCLRFQ
SNFKQKNSKLGSAKIGSTKRSSNKVLNQPDPAATTGSAPQRLITKTGGAGADVMSWEAEG
QQGLEPGVQKFNSIRQNSLDIFSPARDDSKIQGAVGDSMFGRTQAATLEMLPRDCEGQPV
IGRASLDVFSPVREDCQTATSAHRKTPLGTPLVASAGRCFSPLSVYQTPPIKEEEPAPAM
VAESGDIAKPHKTSSSSLEGEVHTTPPSSHQTNLSQPAPPFFTPEPSLGRANGIQTQLSY
DSPTQRATAAASSGPLGSALSAAVSSSLSQNIVEVVGQGGAAPLTSLQIHFIQNMIHETL
EDFRDTCHRDIVNLQVEMVRQFYIQLNEIHSLIERYSVNESLVEEIERLKEENRRLKTNY
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctcaaccgtctggtttccacaggagacaatgtgaagatgtgggatgcattt
tccatggcaccactggagcagttcaatccacacagcatcagccacccagtggcacaagcc
tgctggagctctaacaaccagtacttggtgagtgcaagcagcagcggagacaaactggtg
gtctcaagcctcaaatcgactccagttccagtagtggaaatggctgaagggaaaaggcaa
acccgcgtgtgtcttagttcctcatctcagttcctggtcagtggaggtttggaccactgc
gtccacatctgggacctcaagactaagaggctgcatcgctccttgaaggaccataaagaa
gaggtgacctgtgtgtcattcaatgccaatgacagctccgtcgcctctggctccaccagt
ggggacctggtcctccacagtctaactactaatgtgtccagcaaaccctttggtcatgga
agcaaccagcccatccatgacctgaggctgtctccactgaagcgatccctgctgggcagc
atttctgacagtggcagcatggtcctgtgggacgccaacacacagaaagagatccatgtc
tttgacagtgcccataaagctccaggctgtggtttggtcttctctcctgctagtgagctg
ctggttgtcagtgttggtctggacaaaaagatcatctgctatgacacagtcagcaaaatt
tttctgaagtccatccgggtggagagtccactcaccgctgtggatttcactctggatggt
actggtctggttgtgggatccactcaagggaagatttaccactatgacctgaggaactca
agtgcacccactcggatcactgtggcacataaaacctctgttacctgcctgcgtttccag
agcaacttcaaacaaaagaacagtaaactgggctccgccaagattggcagtacaaagaga
tcttcaaacaaagtgttgaatcagccagatcctgctgcgaccacaggctctgcccctcag
agactgatcaccaaaacagggggcgctggcgccgatgtgatgtcctgggaggcagaagga
caacagggcctggagcctggtgtccagaagttcaacagtatccggcaaaacagtctggac
atcttctctcctgctcgagatgactccaagatccagggggcagttggagatagcatgttt
ggaagaacacaagcagccactttggagatgctgcccagagattgtgagggtcagcccgtc
atcggtcgggccagtttggatgttttctccccagtcagagaagactgtcaaacagctacc
agtgcccatcgtaagacccccttagggacacctctggtagcctccgcagggcgatgcttc
agcccgctgtctgtctaccaaaccccccccatcaaagaggaggagccagcacctgctatg
gtggccgagtcaggtgacatcgcgaagccccataaaactagcagctccagtttggagggt
gaagttcataccacgcccccctcatcccatcagaccaatcttagccagccagcgccaccc
ttcttcaccccagaaccaagcctcgggagagccaacggcattcagactcagctgagctac
gattcacccacccagagagccacagcagcagcctcgtccggacctttaggttcagcactt
tcggcagccgtatcctcttctctctcccagaacatcgtggaggtggttggacagggagga
gctgctcctctcacctccctgcagatccacttcatccaaaatatgattcatgaaactctg
gaggactttagggacacctgtcacagggacatcgtcaacctgcaggtggagatggtccga
cagttctacatccagctgaatgagatccacagtctgatagagagatactctgtgaacgag
tctctggtggaagagattgagaggctgaaagaggagaaccgcaggctgaagaccaactac
tga
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