Takifugu flavidus (sansaifugu): 130537085
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Entry
130537085 CDS
T09160
Symbol
gabra6b
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04080
Neuroactive ligand-receptor interaction
tfs04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130537085 (gabra6b)
04082 Neuroactive ligand signaling
130537085 (gabra6b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tfs04040
]
130537085 (gabra6b)
Ion channels [BR:
tfs04040
]
Ligand-gated channels
GABA-A
130537085 (gabra6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
130537085
NCBI-ProteinID:
XP_056909500
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All DBs
Position
14:12586990..12605972
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AA seq
485 aa
AA seq
DB search
MLFLKVDPGFGVDGCLRGMAFLLTCLFLSCYSAGSVWGNQHSESSIYLDNITRILDRLLD
GYDNRLRPGFGGPVTEVKTDIFVTSFGPVSDVEMEYTMDVFFRQTWIDERLKFEGPIEIL
RLNNLMVSKIWTPDTFFRNGKRSISHNMTTPNKLFRIMQNGTILYTMRLTINAECPMRLM
NFPMDGHACPLKFGSYAYPISEIVYTWKKGPLSSVEVPQESSSLLQYDLIGQTVSSERLK
SNTGEQRLGMSGDSFKDQCQGLLSGLSGLRSVTCLFSCSCTVILAQVSFWINKESVPART
VFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFSTLQAN
RELRKAAAMKAAAQEAAAVAAAAPAPPAGNDAEVSSVDTSTVLKKRMNSAPLFDRPAKTF
PNPPVNAQAFLQQGSAVPANNVLTGTSIIDKYSRILFPLSFGAFNLVYWIVYLTKDTMEM
SRDTV
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgctttttttaaaagttgacccgggatttggcgttgatgggtgcttgcgaggcatggct
ttccttttaacttgcttatttttgtcttgttacagtgccggcagtgtttggggtaatcag
cacagtgagagcagcatctatttggataacatcacccgtatattggatcgattgctggac
ggatatgacaacagactgcggccaggctttggaggtccagttacagaggtcaaaacagac
atctttgtcaccagctttggacccgtttcagatgtggagatggaatacaccatggacgtg
ttcttccgccagacctggatagacgagcggctgaagttcgaaggtccgatcgagatcctg
cggctcaacaacctgatggtcagcaagatctggaccccggacacctttttccgcaatggc
aagaggtcgatttctcacaacatgaccacccccaacaagctgttccgcatcatgcagaac
ggaaccatcctctacaccatgagattaactataaatgccgagtgccccatgcgactgatg
aacttcccgatggacggccacgcctgcccgctcaagtttgggagctacgcttaccccatc
agcgagatcgtgtacacctggaagaaaggtcccctgtcctccgtggaggtgccgcaggag
tcgtccagtttgctccagtatgacctcatcggtcagacggtgtcaagcgagaggctgaaa
tccaacacaggtgagcagagactgggaatgagcggggactcattcaaggatcagtgtcag
ggtctcttgtctggactgtcagggctccggagcgtcacctgtctgttctcctgctcctgc
acagtcattctggctcaagtctccttctggattaacaaggaatctgttcctgctcggacc
gtctttggcatcaccaccgtcttgaccatgacaactctcagtatcagcgcccgccactcc
ctgcccaaagtttcttacgccaccgccatggattggttcatcgcagtctgcttcgccttc
gtcttctctgccctgatcgagtttgcggccgtcaactacttctccaccctgcaggccaac
cgggagctgcggaaagcggccgccatgaaggcggcggcacaggaagcggctgccgtggcg
gccgcggccccggcgccgcccgctgggaacgatgcagaggtctcctcggtggacaccagc
accgtgctcaagaaacgaatgaattcggcgccgctgttcgatcgacctgccaaaaccttc
cccaacccgcccgtcaacgcccaggccttcctgcagcagggctcggccgtgccggccaac
aacgttctgaccggcaccagcatcatcgacaagtactcgcgcatcctcttcccgctttct
ttcggcgccttcaacctggtctactggatcgtctatctcaccaaggacaccatggagatg
tccagggacacagtctga
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