Takifugu flavidus (sansaifugu): 130537177
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Entry
130537177 CDS
T09160
Symbol
cltca
Name
(RefSeq) clathrin, heavy chain a (Hc) isoform X1
KO
K04646
clathrin heavy chain
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04142
Lysosome
tfs04144
Endocytosis
tfs05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130537177 (cltca)
04142 Lysosome
130537177 (cltca)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
130537177 (cltca)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfs04131
]
130537177 (cltca)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tfs04147
]
130537177 (cltca)
Membrane trafficking [BR:
tfs04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
130537177 (cltca)
Exosome [BR:
tfs04147
]
Exosomal proteins
Proteins found in most exosomes
130537177 (cltca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
130537177
NCBI-ProteinID:
XP_056909716
LinkDB
All DBs
Position
14:3060825..3082487
Genome browser
AA seq
1678 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQTQVVIIDMADPNT
PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGDSQPVKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAGFAQFKMEGNSEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQVSAKHNVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEATSGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRLAVRNNLAGA
EELFARKFNNLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQSVPTQPGQTSPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKAVDPTLALSVYL
RANVPNKVIQCFAETGQFPKIVLYAKKVGYTPDWIFLLRNVMRINPEQGLQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQALTELFESFKSFEGLFYFLGSIVN
FSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVVGGLLDVDCSEDVIKSLILVVRGQF
STDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPFY
DSRVVGKYCEKRDPHLSCVAYERGQCDQELINVCNENSLFKSLSRYLVRRKDPELWASVL
LESNPFRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYISRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKDLVKEAIDSYIKADDPSAYMEV
VQAADRSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYKAIQFYLEFKPLLLNDLLMVLSPRLDHSRAVNFFS
KVKQLPLVKPYLRSVQNHNNKSVNEALNNLFIIEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDIELAEELLSWFLQE
NKKECFAACLFSCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVDKLESSESVR
KEEEQATETQPIVYGTPQLMLTAGPSVPVAPQQAYGYGYQAPAGYTQPAPQPGFTYGM
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagatcctgcctattcgctttcaggagcacctgcagcttcaaaacctggggatt
aacccagccaacattggctttagcaccttaactatggagtcggataaattcatctgcatc
cgtgagaaggtgggcgagcagactcaggtggtcatcatcgacatggcggaccccaatact
cccatccgcaggcccatctcggctgacagcgccatcatgaatccagccagcaaggtcata
gcgctcaaagccgccaaaactcttcagatttttaacattgaaatgaagagcaagatgaag
gcgcataccatgacagatgatgttaccttctggaagtggatctccctgaacactgttgca
cttgtgactgacaatgctgtgtaccactggagtatggagggagactcacaacctgtaaaa
gtctttgaccgccattccagcctggcaggatgtcagatcatcaactaccgcacagatgcc
aaacagaaatggcttctgctcattggcatctcagcccagcaaaatcgggtagtaggtgcc
atgcagctctactcggttgaccgaaaggtctctcagcctattgagggccatgctgcaggt
tttgcccagttcaagatggagggaaattctgaggagtcaaccctgttctgcttcgccgtc
agaggccaggctggagggaagttgcacatcatcgaagtggggacaccaccaactggcaat
cagccatttccaaagaaagcagtggacgtgttcttccctccagaagcccagaatgatttc
cctgtggccatgcaggtgagcgccaagcacaatgttgttttccttattaccaaatatggg
tacattcacttgtatgacctggagacgggcacctgcatctacatgaaccgcatcagtggg
gagaccatctttgtcactgcaccacatgaggccacgtcaggcatcatcggagtgaacagg
aaggggcaggtcctctcggtctgtgtggaagaggaaaacatcatcccgtacattacaaat
gtgctacagaatccagatctggctcttcgcttggctgtccgcaacaaccttgctggagcc
gaagagctctttgcacgcaagttcaacaacctgtttgctgctggaaactactcagaagct
gcaaaagttgctgcaaatgcaccaaagggtatcctgcgaaccccagacaccattcgccgt
tttcagagtgttccaactcagcctggccagacctccccattgctgcagtactttggcatc
ttgttggaccagggccagctgaacaaatttgagtcccttgagctatgcaggcctgttctc
caacaaggacggaagcagcttcttgaaaagtggctaaaggaggataagcttgaatgctca
gaggaactgggtgacctagtgaaagcagtggatcccaccttggccctcagtgtttacctc
agagccaatgtccccaacaaagtaatccagtgttttgcagagactggtcagttccccaag
attgtactgtatgccaagaaggtgggctacactccagactggatctttttactcagaaat
gtaatgaggatcaacccagaacaaggcttgcagttcgctcaaatgctggtgcaggatgaa
gaaccacttgctgacattacacagatcgtggatgtatttatggaatacaacctgatccag
cagtgcacatctttcctcttggatgctttgaagaacaaccggccttcagagggaccgctg
cagactcgtctgctggagatgaacctcatgcatgctccacaggttgccgatgctatcctt
ggtaaccaaatgttcactcactatgatcgagcacacatcgcccagttgtgtgagaaagct
ggactcctgcagagggcactggagcactacactgacctctatgacattaagcgtgctgtg
gtgcacacacacctactaaatccagagtggttggtgaacttttttggctcgctgtcggtg
gaagactctttggagtgccttagagccatgttgtcggctaatatccggcagaacttgcag
atctgcgttcaggtggcttctaagtaccatgaacaactctccacacaagcgcttactgag
ctttttgaatccttcaagagctttgaaggtctgttctactttttgggctctattgtgaac
ttcagccaggatcctgaagttcacttcaaatacattcaggctgcctgtaagacgggtcag
atcaaagaggtggagcgaatctgtcgagagagtaactgctacgacccagagcgtgtcaag
aactttctcaaggaagctaaactcaccgaccaactgccactgatcatcgtctgtgaccga
tttgactttgtccatgacctggtcctctacctgtaccgcaacaatctgcagaagtacatt
gagatctacgttcagaaggtaaaccctagccgtctgcctgttgtggttggtggcctgttg
gatgtagactgctcagaggatgtcatcaagagcctgatcctggtagtcagaggccagttc
tcaactgatgaactcgttgctgaagtggaaaagaggaacagactgaagcttctgctgcct
tggctggagtcacgtatccacgaaggctgtgaagaacccgccacgcataatgctctggca
aagatctacatcgacagcaacaacaacccagaacgtttcctgagagagaacccattttac
gacagccgtgtggttggaaagtactgtgagaagagagacccccatttgtcctgtgttgcc
tatgagaggggacagtgtgaccaggagctgatcaatgtatgcaatgagaactcccttttc
aagagcttgtctcgctacctggtccggcgcaaagatccagagctttgggccagtgtgttg
ctggagagcaaccccttcaggcggccacttattgaccaggtggtacagacagccctgtca
gaaactcaggacccagaggaggtctcagtcacagtcaaggccttcatgactgctgatttg
cccaatgagctcattgagctactggagaagattgtgttggacaattctgtcttcagtgaa
cacagaaatctgcagaacctgctgatcctgacggcaattaaagctgatcgtacccgtgtg
atggaatacatcagcaggctagacaactacgatgctcctgatattgctaacatcgccatc
agcaatgagctctttgaggaggcctttgccatattcaagaagtttgacgtaaacacctct
gcagtgcaggtgctgattgagcatattggaaacctggaccgggcctatgagtttgcggaa
cgctgcaatgaaccagctgtgtggagccagctggctaaggctcagctgcagaaggacctg
gttaaagaggccatcgactcctacataaaagctgacgacccctctgcatacatggaggtg
gtacaggctgctgacaggagcggtaactgggaagacttggtcaagttcctgcagatggct
cgtaagaaggcccgtgagtcttacgttgagacggagctcatctttgccttggccaaaaca
aatcgcctggctgaactggaggaatttatcaatgggcctaacaacgctcacatccagcag
gttggtgaccgctgctacgatgagaaaatgtatgaagccgccaagctgctatacaacaac
gtctccaactttgggcgtctggcatcgacactggttcacctcggggagtaccaggctgct
gtggatggtgcccgcaaggcgaacagcacccgtacctggaaagaagtgtgctttgcatgt
gtagatgggaaagaattccgattggcccaaatgtgtggtcttcacatcgtggtgcatgct
gatgaactggaagagctcatcaactactaccaggatcgtggttactttgaggagttgatc
accatgctggaggcggctctgggcctggagcgtgctcacatgggcatgttcacagagctc
gcgatcctttactcaaagttcaaaccccagaagatgagggaacacctggagctcttctgg
tcaagagttaatattcccaaagtcctgagagcagctgagcaggctcacctgtgggccgag
ctggtcttcctctatgacaagtatgaagagtatgataacgcgatcataaccatgatgaac
cacccgacagatgcctggaaggaggggcagttcaaagatataattaccaaggtggccaat
gtggagttgtactacaaagccattcagttctatctggagttcaagcctttgttactgaac
gatttactgatggtgctgtctccccgactggatcactcacgtgctgtcaacttcttcagc
aaggtgaaacagctgcccttagtcaaaccctacctgcggtcagtccagaaccacaacaac
aaatcggtcaacgaagcacttaacaacctcttcatcatcgaggaggattatcaggcgttg
aggacatcaatagatgcctatgacaactttgacaacatctcactggcgcagcgcttggag
aagcacgagctgattgaatttaggagaattgctgcctacctgttcaagggcaacaaccgt
tggaaacagagcgttgagctctgcaagaaagacaagctctataaggatgccatgcagtat
gcatcggaatccaaggacattgagctggcagaggagctgttatcttggtttctgcaggag
aacaagaaggaatgttttgccgcttgcttgttttcctgctatgacctgctgcgcccagat
gtggttttggagacggcctggagacacaacatcatggacttctcaatgccatattttatt
caggtcatgagggagtacctcagcaaggtagacaaactagaatcctcagagtccgtgagg
aaagaagaagagcaggccacagagacgcaacccattgtttatggcacacctcagctgatg
ctgacagcaggtcccagtgtacctgtggcccctcagcaagcctatggctatggctaccag
gcacctgcaggatacactcagccagcacctcagcccggtttcacctatggcatgtag
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integrated database retrieval system
