Takifugu flavidus (sansaifugu): 130537316
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Entry
130537316 CDS
T09160
Name
(RefSeq) roundabout homolog 1-like isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tfs04515
]
130537316
Cell adhesion molecules [BR:
tfs04515
]
Immunoglobulin superfamily
ROBO family
130537316
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
fn3
C2-set_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
HYDIN_VesB_CFA65-like_Ig
Motif
Other DBs
NCBI-GeneID:
130537316
NCBI-ProteinID:
XP_056909992
LinkDB
All DBs
Position
14:9921525..9990204
Genome browser
AA seq
1579 aa
AA seq
DB search
MMVLQAPALFLLTSLLCVLQRQRCHTMVISGTDKLTGNREVNSQTSVPEPSSEDNSFGYK
GSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPSPTVEWYKDGERVETDRDNPRS
HRMLLPTGSLFFLRIVHGRRSKPDDGSYVCVARNYLGQAISHNASLEVAILRDDFRQNPV
DVMVAVGEPAVLECQPPRGHPEPTISWRRDGANLDDRDERITIRSGKLMITNTKKSDAGK
YICVGTNMVGERESETAELTVLERPTFVKRPRSVVVLAEESVKFHCAVQGDPVPTVRWRK
DDSDLPKGRFEILEDHTLNIRQVTSADEGSYTCVVENMVGKSEASATLTVHVPPAFAVRP
RNQEAAVGRFVTFQCEATGNPQPAIFWQKEGSESLLFSYQPPQPFSRLSVSQTGSLTITN
IQHSDGGFYSCQALNIAGSVITKALLEVTDSGAEHPPPVIKRGPLNQTVPVDSTVVLSCH
ALGSPPPAIHWKRDGVVLSPVDSRMSISDTGSLEIRYAKLGDTGFYTCVASSPNGEASWT
AHLQVEEFGVAVHSGHPADPDLIPAAPSKPEVADVTRTSVTLTWKSNPSSGAAPASYLIE
AFSYTLGSRWVTLVEHVKTDTFVLKGLKPATVYLFMVRAVNSHGISDPSPISDSVRTQDS
PSTIPGVDHRHIQKELGDVLVHLHVPTIVSSSAVRVQWTVEQLSPYIQGYKVFYRPSADH
GQPEGQWSIVEVHAPREDGVVIGQLKGGSIYEFKVRPFFDEFQGADSEVKVVRTLEDAPK
RAPQGVTVTKSDVNGTAILVAWKPPPEWEETGRIQEYKIWCLGNESRYHVNQSVDGSTYS
VVIPSLAPGIRYSVEVAASNGAGPGVKSNVTFFQLDSAGQMMDISEERDTLSQISDVVKQ
PAFIAGIGATCWLILMIFSVWLYRHRKKRSGLSSTYTGIRKVPSFTFTPTVAYQRGESVC
SAGRPGLLGMSEPLNQLWLPDNWPNACANHKDCSINCCNNGNGTSDSNMTTYSRPADCIA
NYGNHAENTQRSSETAIYSDVNLSNKLSEIKMFPNSNMCYTSPDGDSSATYEPIPYATTQ
LIQANIKNKAAAAGAIAEPLDIPCWKQQPPNLPPIPKEMATQMQYNISEQSMLIKDNLQG
SEGAIHPKPVPYNHNRDHNTGSSYHSSDRGSNSTAGSQNQKKGARAPKIPKHNAETWGEA
LSPLHANVCVCDEYSLPLERSFYPEERTESCPSPPARGATASSAEGSYSHPSSSQGDPGL
QNGAEHMSHPSPLSPTHTYSSIRLCVDMNGQEDYEERVEEEEETEAEPAGNHCSRGQDCP
RLKHPSLHKLLHGGQEQTPASSTGDLDRSVTGSMVNSWGSASEDNISSGRSSVGSTSEGS
FFTDGDFNQAVALSRDIVGLRVCRYPEEPGRWTQRPSSPMSTDSNMSPAITHRRPRRHKQ
NQPGEQENQPSDSFNDDSCMPLSFSSPTAHCDYKARGATLPRMGSGENRGRRGSTGTHRV
KDAACEQRENQDKHRSPPRGKGSSRNRQHSELGDIFLYSRPSFPSGPTQREPDGANSSSL
SCGDSRTKQRGGVEEFLKS
NT seq
4740 nt
NT seq
+upstream
nt +downstream
nt
atgatggttcttcaggcccctgcgctgtttctactcaccagcctgctctgtgtccttcag
aggcagcggtgtcacaccatggtcatttcaggtacagataaactcacggggaatcgtgag
gtcaacagccaaacatcagtaccagaaccatcatctgaagacaacagctttggatacaaa
gggtctcgtctacgccaggaagacttccctccccgcatcgtggagcacccctctgacctc
attgtgtccaagggggaaccggccaccctgaactgtaaagcagagggccggccaagcccc
acggtggaatggtacaaagacggggagcgtgtggagacggaccgcgacaacccccgttct
caccgcatgctgctgcccaccggctcgctgttctttttgcgcatcgtgcacggacggcgg
agcaaaccggacgatggcagctacgtgtgcgtggcccgaaactatctgggtcaggcaatc
agccacaatgcatccctggaagtggccattttacgtgatgacttccgacagaaccctgta
gatgtgatggtggcagtgggtgagcccgcagtgctggagtgccaaccacctcgcgggcac
cctgaacccacaatctcctggaggagagatggcgccaaccttgatgacagagatgaacga
attacgatccgcagtggcaagctgatgatcaccaacaccaagaagagcgatgcggggaaa
tacatctgcgttggaaccaacatggttggagagagggagagcgagaccgcggaactcacc
gtgctcgagcgtccaacctttgtgaagcggcccagaagtgtggtggtgctggcggaagag
agtgtcaagttccactgtgccgttcaaggagaccccgttcccactgtccgctggaggaaa
gacgactccgacctgcccaagggcagatttgaaatcctcgaggaccataccttgaatatt
cgtcaagtgacgtctgcggatgagggatcttacacttgcgtggtggaaaacatggtcgga
aagtcggaagcgtctgccactctcactgttcacgtgcccccggcttttgctgtacgcccc
agaaaccaggaggcagcagtgggcaggtttgttacctttcagtgcgaagccactggtaat
ccacaacctgctatcttctggcagaaggagggaagcgagagtctcctcttctcctaccag
cctcctcagcccttcagccgcctctcggtctcccagacgggtagtttgaccattaccaac
attcagcactctgatggcggcttctatagctgccaggctctcaacatcgccgggagtgtc
attactaaagccctgctggaggtcacagactctggagccgaacaccctccccctgtgatc
aagcggggtcctctcaatcaaaccgtgcctgtggacagcacggtggtcctgagctgccac
gcgctcggctctccgcctcccgccatccactggaaaagggacggcgtggtgttgtcaccg
gtagactctcgcatgtccatctcagatacgggatcgctggagatccgctacgctaagctg
ggagacacaggcttctacacctgtgtggcttctagtccaaatggagaggcctcgtggacc
gcacacctacaggtggaggagtttggagttgccgttcactccggccaccctgcagatccg
gacctgattccggcagctccatccaaacctgaggttgccgacgtcacccgcacctcggtg
acgctgacgtggaagtccaaccccagttcgggcgcggcgccggcgtcgtacctcattgag
gcgttcagttacacgctaggcagcagatgggtgaccctggtggagcatgtgaagacagac
acctttgtgctgaagggcctgaagcctgctaccgtctacctgttcatggtccgagcggtg
aactctcacggcatcagcgaccccagtcccatctccgactccgtcagaacacaggacagc
ccttccacaataccgggagtggaccaccgtcacatccagaaggagctgggagacgtgctg
gtccacctgcacgtgccgaccatcgtgtcgtcttctgccgtcagggtgcagtggacggtg
gagcagctgtccccgtacattcagggctacaaggtgttttaccggccatctgctgatcac
ggtcagccggaggggcagtggagcatcgtggaggtacacgccccccgggaggacggggtg
gtgatcggtcagctgaaaggaggctccatctacgagttcaaagtgcgccccttctttgat
gagttccagggggctgacagcgaggtgaaggtggtcaggacactggaggatgctcctaaa
agagcaccgcagggcgtcacagtgacaaagagtgacgtcaacgggacggccattctcgtt
gcgtggaaaccacccccggaatgggaagaaactggacgcattcaggagtacaagatctgg
tgcctcggtaatgagagccgttaccatgtgaaccagtctgtggacggatccacctactct
gtagttattcccagtctggcaccagggatccgctacagtgtagaggtcgcagccagcaat
ggcgctggtcctggggtcaaaagcaatgtcactttctttcaactagactctgcgggccag
atgatggacatcagtgaggagagagacactttgtcccagatctcagatgtggtgaagcag
ccggcttttattgctggcattggcgccacctgctggctgattctcatgattttcagcgtg
tggctttatcgacaccgcaagaagagaagtggccttagcagcacttatactggcatccgc
aaagtcccgtcgttcaccttcacaccgacagtggcgtatcaaagaggagagtctgtgtgc
agtgctggcagacctggccttctcggcatgagcgaacctctgaaccagctttggctgcca
gacaattggccaaatgcatgtgccaatcacaaggactgtagcatcaactgctgcaataat
ggcaatggcaccagtgacagtaacatgacaacatacagccgaccagctgactgcatagcc
aattatgggaaccatgccgaaaacacacagcgcagttctgagacggccatttacagtgac
gtgaacctctctaacaagctcagcgagattaaaatgtttcccaactccaacatgtgctac
acgagtccagatggcgactcctcagccacgtatgaacccatcccttacgccaccacgcag
ctcattcaggccaacattaagaataaggcagctgctgccggtgctatagcagagcctctg
gacataccctgttggaaacaacagccccccaacttgcccccgattccgaaggagatggct
acgcagatgcagtacaacataagtgaacaaagcatgttaattaaagataatctacaagga
agtgaaggagccatccatcccaagcctgtgccctacaaccacaaccgtgaccacaacacg
ggaagctcgtaccacagctcagacagaggtagcaacagcaccgcagggagtcaaaatcaa
aagaaaggagcgcgggcccccaaaatccccaaacataatgcagagacctggggagaagcg
ttatctcctcttcatgcaaacgtgtgtgtctgtgatgagtacagcctgcccctggagcga
agtttttatccagaagagaggacagagagctgcccttctccaccggctagaggagccacc
gcatcctctgctgaagggtcctacagtcacccttcatcatcacaaggggacccgggtctg
cagaatggagcggagcacatgagccacccctcccctctctccccgacacacacctacagc
tccatacgcctctgcgtggacatgaatgggcaggaagactacgaagagcgggtggaggaa
gaggaagagacggaagcggagcccgccggaaatcactgcagccgaggacaagactgtccc
agactcaaacacccgtctttgcacaagctgctccacggcggtcaggagcagaccccggcc
tccagcacgggggatctcgaccggtcggtcacaggatccatggtcaacagctggggatca
gcgtctgaggacaacatctcatcaggcaggtccagcgttgggagcacttcggagggatcc
ttctttacagacggcgacttcaaccaggcggtagctttgtcccgggacatcgtaggtctg
cgtgtctgcagatacccggaggagccaggtcggtggacacagagaccgagcagccccatg
tccacggacagcaacatgagtcctgcaataacgcacagaagacctaggaggcataaacag
aaccagcctggtgaacaggagaaccagcccagcgacagcttcaacgacgactcctgcatg
cctttgagtttctccagccccacggcccactgtgactataaagcgaggggcgccacactg
ccacggatgggctcaggggagaaccggggtcgacgaggcagcaccgggacacaccgggtc
aaggatgccgcttgcgaacagagagagaaccaggacaagcacaggagcccccccagaggg
aaggggagcagcagaaaccgacagcactcagaattaggggatattttcctgtacagtcgt
ccatcgttcccatcaggaccgactcagagggagcccgatggtgctaattcctccagttta
tcatgtggagactccaggaccaaacagagaggaggagtagaggagttcctgaaaagctaa
DBGET
integrated database retrieval system
