Takifugu flavidus (sansaifugu): 130537471
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Entry
130537471 CDS
T09160
Symbol
pcdh1a
Name
(RefSeq) protocadherin-1
KO
K16498
protocadherin delta 1
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
130537471 (pcdh1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tfs01009
]
130537471 (pcdh1a)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tfs04515
]
130537471 (pcdh1a)
Protein phosphatases and associated proteins [BR:
tfs01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130537471 (pcdh1a)
Cell adhesion molecules [BR:
tfs04515
]
Cadherins
Protocadherins
130537471 (pcdh1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
He_PIG
Motif
Other DBs
NCBI-GeneID:
130537471
NCBI-ProteinID:
XP_056910297
LinkDB
All DBs
Position
14:complement(10124648..10194526)
Genome browser
AA seq
1191 aa
AA seq
DB search
MDRTSNAVLLWVLLLLPLGGSVDGSILYRVQEEQPPNTLIGSLAADQGLPDSGHLYKLEV
GSPYLRVDGKTGDIFTTEIPIDRETLRDCRSLVKGKPCYLEFEVSVTDLIQNQSPRLIEG
RIEVQDINDNTPQFPSSVLTISVPENTIMGALFSIPLAMDRDSDRNGVADYALTAGPDAA
TLFGLQVADDRGGKLPQLIVLGNLDRELKDSYDLTIKAVDGGNPQRYSSALLRVVVTDAN
DNAPRFEKSMYEAEVSENSPIGHSVLQVKANDSDMGPNGEIEYTLHQAVDPVPKLLRIDR
STGTIYVKGPLDREDISSLSFYVVARDKGPQPKSSKTFVTIEVTDQNDNAPAVEIRGIGL
VTHSEGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRSASDSSSDNKR
KYFLQTTTPLDYERVRDYRVEIVAVDSGNPALSSTNSLKVQVTDVNDNSPIFSPTLFEVD
FAEENQPGERVLDVTASDADTGTNAELLYNILGDSAIKGLFEIDPNTGEVRARSPLDREH
KEHYEFRVTAADKGSPVHKGTATVVIKVLDRNDNDPKFMLSGYSFSVLENMPPLSPVGMV
TVLDMDKGENARVHLAVESDGGKFVIQNGTGTILSSISFDREKESSYTFRLKAVDGGEPP
RSSYVGVTINVLDENDNDPVVTKPSNSSFRHLSPSAAPDSHVEVVEAEDLDSGPNAELVF
SIAGGNPYQLFHISPSSGQITLAKEMTRKHGGLHRLVVRVSDRGKPARHATALVHIYVNE
TISNVSLVEALVGHSLYTPLDRDIAGDPDNGFAAHRSNILFGSLAGVAGVVLLILVVVFI
RHRIQRETKSGYQAGKKETKDLYAPKQTPKNAKGKRGRKGKPQKPPKALGEDEEVSLQKS
LKFNLDGVSDSPRIHLPLTYSPGSPDIGRHYRSNSPLPSIQLQAQSPSASQKHQVVQDLP
ATNTFVGTGGDDNSTGSDQYSDYSYKTSQPKYNKQHPHRRVTFSTANPVQDLQDASQHSY
YDSGLEESETPSSKSSSGPRIGPLTLPEDHYERTTPDGSIGETEHPENDIRSIPDVAMTG
NCTNECSELGHSDACWMPGHPSPVRKTRNPPKLSTFVPYQERGSLGRLANGSARLGGEEH
RSRLPPSRSAYSNSGLDASQDCPLEEMPLSVASEFPPTSPTVHTPKREIYL
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atggaccggacttcgaacgcagtgctgctttgggtgctgctgctgctgccgctcggtggt
tctgtcgatggcagcatcctgtaccgggtccaggaggagcagcctccgaacactcttatt
ggtagcctagcggcagatcagggcttgcctgactcgggtcacctttataagctggaagta
ggttccccttatctccgagttgatggaaagacgggagacattttcaccaccgagattccc
atagacagagagactctcagagactgtcggtcacttgttaaaggtaaaccctgctatctg
gaattcgaggtgtcagtgacagatttgatccaaaaccagagcccgcgacttattgaagga
cgtattgaggtgcaagacatcaacgacaacacgccacagttcccctcttccgtcctcacc
atctctgtccccgagaacacaatcatgggggcgctattctccatccctttggctatggac
agagactccgacaggaatggcgtggcagactacgcgctgactgcagggccagatgcagca
accctttttggcttacaagtggctgatgacagaggagggaagctgccgcagctcattgtc
ctcggcaacctggaccgtgagttgaaggactcctatgacctgaccatcaaagcagtggac
ggagggaaccctcagcgctatagcagcgccttgctaagagttgttgtgaccgacgccaat
gacaacgctcctagatttgaaaagtccatgtatgaagctgaagtgtcagaaaatagtccc
attggacactccgtgttgcaggtcaaagcaaatgactcggacatgggcccgaatggagaa
attgagtacacccttcaccaagcagtggacccagtcccaaaactattaagaatagatcgt
tcaactggcactatctatgtcaaaggaccactggacagggaggacattagtagcttgtca
ttttatgtggtagccagggataagggtcctcaacctaaaagctccaaaacatttgtaacc
attgaggtgacagaccagaatgacaatgctccggccgttgagatccgtgggattggcctc
gtgacacacagtgaaggcgtggctaatatttctgaggacatgccggtgggaacggctgtt
gctttggtccaagtgtctgataaggatgagggagagaatgccgttgtcacctgtgtagtt
gcgggggacgttcccttccagctccgctcagccagcgactcatccagcgacaacaagagg
aagtatttcctccagaccaccactcccctcgactatgaaagagttagggattacagagtc
gagattgtggcagtggattctgggaatccagcactctctagcacaaactccctgaaggtc
caagtcactgatgtcaacgataactccccaatattttctccaaccttgttcgaagtagat
tttgctgaagaaaaccaaccaggggagagggttctggacgttaccgcttcagatgctgac
accggcactaacgcggagctgctctataatattttgggagactcggccatcaagggcctg
tttgaaattgacccaaatacaggcgaagtgagagcaagaagcccacttgatcgagagcat
aaagaacattatgagtttcgggtcactgcagcagacaaaggatcacctgttcataaagga
actgcaactgttgtgataaaagtgctggatcgcaatgataatgatccaaagttcatgctc
agtgggtacagcttttcagttttggaaaacatgccccccctcagtccagttggcatggtg
acagtgttagatatggacaaaggcgagaatgctcgagttcacctcgctgttgagtctgac
ggagggaagtttgttattcaaaatggaaccggcactattctatcaagtatttccttcgac
agagagaaggaaagcagctacacattccgtctgaaagcggtggatggtggggagccaccc
agatcttcatatgtgggcgttaccatcaatgtactggacgaaaatgacaatgaccccgtc
gtcactaagccatccaattcttccttcagacatctgtcaccttctgctgccccagacagc
catgttgaggtagtggaagctgaagacttggatagcgggcctaatgcagagcttgtcttt
agtattgctggtggaaacccttaccagttattccatatatccccttccagtggacagatt
acactggcaaaagaaatgactcgtaaacatggtggactgcatcggcttgtggtgcgagtg
agtgacagagggaagcctgcacgccacgccactgccctggtccacatctatgtcaatgaa
accatttcaaatgtcagcttagtggaggctctcgttggacacagtctttacactccactg
gacagagacatcgccggtgatcctgacaacggtttcgctgcgcaccgcagcaatatattg
ttcggaagcctagccggtgtggcaggagtcgttctattgatcttggtggtggtatttatt
cgccaccgcatccaaagagagacaaagagcggctaccaggctggcaaaaaggaaacaaag
gacttatacgcaccaaaacagacaccaaagaatgccaaaggcaaacgaggaaggaaaggt
aaaccccagaaacccccgaaagctctaggagaagatgaagaggtcagtcttcaaaagagc
ctcaagttcaacctcgatggtgtcagcgatagtcctcgaatacacctgcctctaacctat
tcgcccggaagccctgacataggccgacactaccgctccaattctcccttaccctccatc
caactccaggcacagtccccctcagcctcccaaaagcatcaagtggtccaggaccttcct
gccaccaacacctttgtaggaacaggcggggatgacaactccaccggctcagaccagtac
tcagattacagctacaaaaccagccagccgaagtacaacaaacagcacccccatcggcgc
gtgaccttctccaccgccaaccccgtgcaggacctgcaggatgcttctcagcacagctat
tatgacagcggcttggaggagtcagaaactccgagcagcaagtcgtcgtctggtcctcgc
attgggcctctgaccctgcccgaggaccactatgagagaaccaccccagacggcagcatt
ggcgagaccgagcaccccgaaaacgatatccgttccatccctgacgtggcaatgacagga
aattgcacaaacgagtgcagcgagctgggccactcggacgcctgctggatgcctggccat
ccctccccggtacgcaaaaccaggaaccccccgaaactctccaccttcgtgccttaccag
gagagggggagcctgggacgcctggcgaacgggagcgccaggctgggtggcgaggagcac
cggtcgcgcctcccgccgtcgcgcagtgcctattccaacagcggtctcgatgccagtcag
gactgccctttggaggagatgcccctcagcgtcgcctctgagtttccgcccacctccccc
accgtccacaccccgaaacgagaaatatacctgtga
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