Takifugu flavidus (sansaifugu): 130537547
Help
Entry
130537547 CDS
T09160
Name
(RefSeq) LOW QUALITY PROTEIN: replication protein A 70 kDa DNA-binding subunit-like
KO
K07466
replication factor A1
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03030
DNA replication
tfs03420
Nucleotide excision repair
tfs03430
Mismatch repair
tfs03440
Homologous recombination
tfs03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
130537547
03420 Nucleotide excision repair
130537547
03430 Mismatch repair
130537547
03440 Homologous recombination
130537547
03460 Fanconi anemia pathway
130537547
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfs03000
]
130537547
03032 DNA replication proteins [BR:
tfs03032
]
130537547
03400 DNA repair and recombination proteins [BR:
tfs03400
]
130537547
Transcription factors [BR:
tfs03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
130537547
DNA replication proteins [BR:
tfs03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
130537547
DNA repair and recombination proteins [BR:
tfs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
130537547
MMR (mismatch excision repair)
130537547
DSBR (double strand breaks repair)
HR (homologous recombination)
130537547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
RADX
Motif
Other DBs
NCBI-GeneID:
130537547
NCBI-ProteinID:
XP_056910426
LinkDB
All DBs
Position
14:10926419..10949174
Genome browser
AA seq
683 aa
AA seq
DB search
MDINLTQGAVEDLVEGRPVNDPVLQLVDTLQITKGSGPTRYRVRMSDGRHLWSAFLLATQ
LNHLSEENLLVPHCVCLLKKTTTNTLSDGRRVVIILDMEILQSAEKTGGLIGNPTTYKER
SKSSPEEPTSAAQLGNSSDNSRAAFSPRGGGTASPMKTSAEKPSPSKFSPSEASSSKFSP
MKGSSFKFSPAKASPTTFSPAKGSPAKFSPTKASPSTFSPAKASTSKFSPVKGSPSKFSP
TKASSSSPGASSNMIPIAQLNPYQSKWTIRARVMNKSSIRNWNNSRGEGKLFSFEIVDES
GEMKITAFNKEVDKFFSLVEQGKVYYISKATLKVANKQYNTLKHDYEMTLHAHSSIVPCA
DGQDIPAVQCDFVPIAELENRDKDAIIDVIGVCKTAEDVSRITTKSSREVSKRTLHLIDT
TGKMVAATLWGEEAEKFEGSEQPVVAIKGARLSDFGGRSLSALFSSTVMVNPDIPEAFRL
RAWYDQGGYALASQSLSETKSGGSGMRMNWKTLSDVKNENMGHGEKADYFSCVATLLYSR
KDTCLYQACPSVDCNKKVLDQHNGWFRCEKCNREFPNFKYRLLLSANLADLXDNQWVTCF
QETAEALLGHSAETLGQLRDTDEAAFDAVFQKANFTTHIFKNRVKLETYNDESRVKVTVM
EVQPVNHREYSRMLLSNIHNLTQ
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggatataaatctcactcagggcgcagttgaagatctggttgaaggaagaccagtcaat
gatcctgtcctgcagctggtagacactcttcagatcaccaagggatctggtccaaccagg
taccgtgtcagaatgagtgatggacggcatttgtggtcagcgttcctgctcgccacacaa
ttaaaccatctttcggaagagaacctgttggttccacactgtgtgtgtttgctcaagaag
accacaaccaacacattatcagatggcagacgtgtagttatcatcttggacatggaaata
ttacagtcggctgagaaaactggaggtttgattggaaatcccaccacttataaagaaaga
tcaaagtcatcccctgaagagcctacatctgctgcacaactgggaaattcctccgacaac
agtagagctgccttctctccccgaggtggtggaacagcttcccccatgaaaacatcagca
gaaaagccttctccctccaagttttcaccctctgaggcttcatcatctaagttctcacct
atgaagggctcatcatttaaattttctcctgcaaaggcttcgccgaccacattttctcct
gcaaagggatccccagctaaattttctcctacaaaggcttcgccatccacattttctcct
gcaaaggcttccacatcgaaattttcccctgtgaaaggttccccgtccaagttttcaccc
accaaggcttccagcagttctccaggcgcttcgtcaaacatgatccctatcgctcagctc
aacccctaccaaagcaaatggaccatcagagccagagtcatgaacaagtccagtatccgc
aactggaataactccagaggagaagggaagctcttctcctttgagatagtagatgagagt
ggtgaaatgaagattacagccttcaacaaagaagtggataagttcttctctttagtggag
caaggaaaggtttactatatctccaaggctactctgaaagtggcaaacaagcaatacaac
actttaaagcatgattacgagatgaccctccacgctcattcctccatcgtgccatgtgct
gacggtcaggacatcccagcagtgcagtgtgactttgtgccgattgccgagctagaaaac
agagacaaggatgccatcatcgacgtgattggagtgtgtaagactgctgaggatgtttcc
cgcatcaccactaaaagcagcagagaggtttccaagaggactcttcacctaatagacact
actggaaaaatggtggcagccacactgtggggagaagaggcggagaagtttgaaggctct
gaacagcctgtggtcgccatcaaaggagctcgcttgtctgattttggaggcagatctctg
tctgctttgttcagttcaacagtcatggtcaatccagacataccagaggctttcaggcta
agggcatggtatgaccagggaggctatgcgctcgccagccagtctctgagcgagacaaaa
tcaggggggagcggcatgaggatgaactggaaaacactgagcgacgtcaaaaatgaaaat
atgggacatggagagaaggcggactacttcagctgcgtggcgacactactgtactctcgg
aaggacacttgcctgtaccaggcatgtccgtctgtagactgtaacaagaaggtcctggac
cagcacaacggctggttccgctgtgaaaagtgtaaccgagaattccccaactttaaatac
agactcctgctttctgccaacttggctgacttangggataaccagtgggtgacgtgtttc
caggagacggctgaggccctgctgggtcacagtgcagaaacgctgggacagctcagagat
acagatgaggcagcatttgatgctgtcttccaaaaagccaacttcacaactcacatcttc
aaaaacagagtcaagctggagacttacaacgatgagagccgggtgaaggtaacagtgatg
gaggtccagccggtgaaccacagagagtacagcaggatgctcctcagcaacatccacaac
ctcacccaatga
DBGET
integrated database retrieval system
