Takifugu flavidus (sansaifugu): 130537601
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Entry
130537601 CDS
T09160
Name
(RefSeq) LIM domain only protein 7-like isoform X1
KO
K06084
F-box protein 20
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
130537601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfs04121
]
130537601
Ubiquitin system [BR:
tfs04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
130537601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
PDZ
PDZ_2
PDZ_6
Motif
Other DBs
NCBI-GeneID:
130537601
NCBI-ProteinID:
XP_056910496
LinkDB
All DBs
Position
1:complement(13270735..13309949)
Genome browser
AA seq
1578 aa
AA seq
DB search
MKGQTGVMEWREQSSLGCAEAYLEAQRWIEAVTKKTFGSDDFRSALENGILLCDLINKIK
PGTIKRINRLPTPIAGLDNLNVFLRACGKLGLKDAQLFHPGDLQDLSSRVTVKDQETNRR
LKNVLITIYWLGRRAQCDQSYDGPYLNFKAFEGLLGTALYKALHESPSLRDSSIRDSGFG
DSWYSEREEPPHFRGAQAGGGGSVHKRDNSLDSLNSLSSQAHSISSDTTIKGSSEGCCSD
TEADSVFKMTDNTQNISYRRSVSITPKATAPFNQFLPSKDKSSGYVPAPLRKKRAERNED
IRHSWASASTEDDRILTSSEAGLSSKSCSSTQPSQSVTPPVHQHWTMEDESGSDSDADRP
DPDLVLDDLASRRFRSPSPTTPTNFAVPASPGGMGSAPGVKGGPWAKVTMTPSAPLQNVT
SHRSKSTNDIQLPVDAGARRYELLQKFRDQIKESESQWQDDLSKWKNRRRSVNSDIVKKK
EEREKIEQITSSDNYSRRSKTFREMQDERETKGRLTSLSYLEEDVFDKSVVSPQPRKFPA
RSQTIDSPYYSYDTHDRSLKQDEPPTASTATGRAASPPTSREVDIVDGPAGRDQVQSTTT
STRHSSFHSSQSTAVAPLRSSLGPSYSDTAKTEKTTTAASSFSSVQKVREPTRPLLRTKA
EVEIPSSGAQTKYQPQPSSMESNPPALSRVSASLPRSYQRSDSARLTSVVAPRPFGAQTS
RITSLPRAFTVDDPQSRVNGDGSKKSAAPSRYQQFMTSEDEADSSSAHSSNEEEEEEEVE
KDRTTVTSTSVSTVLPPVKDEALVSSAPVSESVKESHCEMRISLNQKPNSSRDFGFQAVW
DSTGARVMSVQPGSQAEMCQLQAGDEVLTVNRHQVAEMSYTGWKSRMEEALQEGSLVMDI
RRHGKDNWDRAQPSLPFKSHKTINLTSTDHPILLGSSEKSSVNASLDFTSRVSTDTQAPR
EPPTRTVIDVASSGVNGGFCEEPLNMRNKESESISLKNLKRRSEFFEKGGPEAVMPDILV
PPIVPPASRWSWDPEEERRRQEKWQKEQERLLQEKYKRDQEKLQAEWLKAQQEIAKNTEQ
QQQPRTLAVNSQSPVSISPRAPLSPLKQATSHPWEEEERKRKEEQEQQWQAERRRREEEE
REQQRLQAERRRREEEEREQQRLQAERRRKEEEEERERQRLQAERRRKEEEEERERQQLQ
AERRRKEEEERRRLEEEELLWQKRRAQEREDERRRQEAAEQLRRERERAAQQQQQWHGSS
YGFSNSQSSLSFTDRMKSKSTPQLDQDEKTPWKGVNVQQHLWWERPLPGGSNTQAQSQRA
ASEQDLKRRYILDSIRIRTLERANSRAVGDSRGQQPPSQANVERQQILNEMKKKIPLLTD
SSWIRQGSSSTVRETNLLPMRRGESLDNLDAPSTWRSSWTPRSNAFVPNHNPLPSAFSGS
DVISSGGSGVQRPSTLLSSYSVGHLRGGAGMPSFPSSKQSPLPSPLSPTRSAEPWNNAGS
RSVSGKKICTFCDIPLGKGAAMIIESLGLCYHLSCFKCFDCKAELGGSEAGAEVRIRNKQ
LYCNLCYMRFKTATPTEM
NT seq
4737 nt
NT seq
+upstream
nt +downstream
nt
atgaaagggcagactggagtgatggagtggcgagagcagtcctctctcggctgcgccgaa
gcctacctggaggcgcagagatggattgaggcagtgaccaagaaaacgtttgggagcgac
gacttccgatcggcgctggagaatggcattctgctgtgcgatctgatcaacaagatcaag
cctggtaccatcaagaggatcaacagactgcctacacctattgctggactggacaacctt
aacgtcttcctcagggcctgtgggaagctgggacttaaagacgcacagctctttcaccct
ggagatctccaagacctgtcctccagagttacagtcaaggaccaagagaccaataggagg
ctaaaaaatgtgctgatcactatttactggctggggagacgagctcagtgtgaccaatca
tatgatggaccttacctaaattttaaggcctttgagggattattgggcacagcgctgtac
aaggctctgcatgaatcacccagtctgagagacagcagcatcagagacagcggatttgga
gatagctggtactccgagcgagaggagccgccccatttcagaggagcgcaagcaggagga
ggaggaagtgtgcacaagagagacaattccctggacagtttaaactctttgagctctcaa
gcccacagcatctcatctgacaccacaattaaaggcagcagcgagggttgctgcagtgac
accgaggcagactctgtctttaagatgactgacaacacgcagaatatcagttaccgccgg
tcggtgtccatcacccccaaggccaccgcaccctttaaccagttcctcccatctaaagat
aaatcctcaggctacgtccctgcaccactgaggaagaaacgggctgaacgcaacgaagac
attcgccacagctgggccagcgcgtccactgaagatgaccgcatcctcaccagcagtgaa
gcagggctctcctccaagtcctgcagtagcactcaaccctcccagagtgtcacaccccca
gttcatcaacactggactatggaggatgagagtggcagcgactcggacgcagatcggcca
gaccctgaccttgtcctggatgacctggccagcaggcgcttccgcagcccctccccaact
acccccaccaactttgcagtacctgccagtccggggggcatgggaagtgcaccgggagtt
aaaggtggcccctgggctaaggtcactatgactcccagtgctcctcttcagaatgtgacc
tcccacaggagtaaatcaacgaatgatattcagctaccggtagatgccggcgctcgacgt
tatgaactgctgcagaagtttcgggaccagataaaggagagtgagagtcaatggcaagac
gacctgagcaagtggaagaaccggcgcaggagtgttaattcagatatagtgaagaagaaa
gaagaacgggagaagatagagcaaatcacatccagcgacaattacagcagaaggtcaaag
accttcagggagatgcaagacgagagagaaactaaaggccgtctcacttctctgtcttac
ctggaggaggacgtttttgacaagtctgttgtctcccctcagcctcgaaaatttcctgcc
aggagtcaaactatcgacagtccttactattcctatgacacccacgatcggtccctgaaa
caggacgaaccccccactgcctccacagccacaggcagggctgcgtcccctcccacctca
cgggaagtggacattgtggacggtcctgccggcagagaccaagtccagagcaccactact
tccaccaggcacagctctttccacagttcccagtccactgcagtagcaccattgcggagc
agtttgggcccatcatacagtgacacagccaaaacagagaaaaccacaactgctgcatcc
tcctttagctcagtgcaaaaggtgcgcgaaccaacccgaccattgttgcgcacaaaggct
gaggtggagatcccttcctctggtgctcagactaaataccaaccacagcccagctcaatg
gaatccaaccctcccgcgttgtctcgggtttctgcctccctccccaggagctaccagaga
tcggacagtgcacgtctaacctcagttgtagcgccaaggccttttggggcccagacgtcc
cgcatcacctcacttccccgagcctttacagtggatgaccctcagagccgcgtcaatggt
gatggttcaaagaagtcggcagcaccgagtcgctatcagcagttcatgacctctgaggac
gaggctgactccagctcagcccacagcagtaatgaggaggaggaggaggaggaggttgaa
aaagacaggaccaccgtgaccagcaccagcgtgtccactgtccttccacctgtcaaagat
gaagctcttgtcagctctgctccagtcagtgaaagtgtcaaagaaagccactgtgaaatg
aggatcagcctgaaccagaagcccaacagcagcagagactttggtttccaggcagtctgg
gattcaactggtgctcgtgtcatgtccgtccaaccaggcagccaggcagaaatgtgccag
cttcaggccggggatgaagtgctgacggtgaacaggcaccaggtggcagaaatgagctac
acaggctggaaatctcgcatggaggaggccctgcaggagggcagcctggtcatggacata
cgcagacatggaaaagacaactgggacagagctcagccttccctgccatttaaaagccat
aagaccatcaatctgaccagtacggatcatccgatacttctaggttcctcagaaaagagc
tctgtcaacgccagcctggatttcacctcgcgagtgtccacggatacacaggcgcccaga
gagccccccacccgcacggtcatcgatgtggcatcaagtggtgttaatggaggattctgt
gaggagccgctcaacatgaggaacaaagagtcagaatccatatctctgaaaaacttaaaa
cggcggtcagagttttttgaaaaaggtggcccagaggcagtgatgccagatatactcgtg
cctcccatcgttccacctgccagccgctggtcctgggacccagaagaggagcgaagaaga
caagagaaatggcagaaggagcaggagcgcctcctacaggagaaatataagcgtgaccag
gagaaactacaggcagagtggctgaaggctcaacaggagattgcaaagaacacagagcaa
caacagcagcccagaacactggcggtgaacagtcagtcaccagtcagcatcagcccacgg
gcccccctctctcctctcaaacaagccacctctcacccttgggaggaggaggagagaaag
aggaaggaggagcaggagcagcaatggcaggcagagaggagaaggagggaagaggaggag
agggagcagcaaaggctgcaggcggagaggagaaggagggaagaggaggagagggagcag
caaaggctgcaggcggagaggagaaggaaggaggaagaggaggagcgagagcggcagcgg
ctgcaggcagagaggagaaggaaggaggaagaggaggagcgagagcggcagcagttgcag
gcggagaggagaaggaaggaggaagaggagaggaggaggctggaggaagaagagctcctt
tggcagaagaggagagcgcaggagagggaggatgagaggaggcgccaggaagcagcagag
cagctgcgcagagagcgggagcgagcggcccaacagcagcagcagtggcatggcagctct
tacggcttttccaactcccaatcttcactttccttcacagacaggatgaaatccaaatcg
actcctcagcttgaccaagacgaaaaaactccttggaaaggtgtgaatgtgcagcagcat
ctctggtgggaacgaccactgccgggtggatctaacacacaggcccagagtcagagggct
gcatcagaacaggatctgaagaggagatacatcctcgattctatcagaatcagaacgtta
gagagagcaaacagcagagctgtgggtgacagcaggggtcagcagcccccctcacaagcc
aacgtggaacggcagcagatcctgaacgagatgaaaaaaaagatcccgctgctgacggac
agcagctggatccgtcagggctcctccagcaccgtcagggagaccaatttgctacccatg
cggagaggtgagtctcttgacaacttggatgcccctagcacctggcgttcatcatggaca
cctagaagcaacgcttttgtccccaaccacaacccgctgccgtctgccttctctggcagc
gatgtaatttccagcggtggttctggggtccagcggccttctactttgctttcgtcgtac
tctgtgggccacctccgaggaggggcaggaatgccctcgttcccttcatccaagcagtcg
cccttaccttctcctctgtcacccactcgctctgccgaaccctggaataatgcaggaagc
aggtcagtgagtggcaagaaaatctgtacgttctgtgacatcccactggggaaaggagcc
gccatgatcatcgagtccctcgggctctgttatcatttgagctgttttaagtgtttcgac
tgtaaggctgaacttggaggctcagaggcgggggcagaggtccgaatacgaaataaacaa
ctctactgtaacctctgctacatgcgattcaaaactgccacgcccactgagatgtga
DBGET
integrated database retrieval system
