Takifugu flavidus (sansaifugu): 130537891
Help
Entry
130537891 CDS
T09160
Symbol
pms2
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03430
Mismatch repair
tfs03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
130537891 (pms2)
03460 Fanconi anemia pathway
130537891 (pms2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfs03400
]
130537891 (pms2)
DNA repair and recombination proteins [BR:
tfs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
130537891 (pms2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
130537891
NCBI-ProteinID:
XP_056910988
LinkDB
All DBs
Position
1:18239436..18244437
Genome browser
AA seq
846 aa
AA seq
DB search
MPNTCNDMSAGTIKAIDKHSVHQICSGQVVLTLATAVKELVENSIDAGATNIDVRLKDCG
ADLVEVSDNGKGVEEANFEGLTLKHHTSKLREFTDLIHVETFGFRGEALSSLCALSHLSV
VTCHESCQVGTKLVFDHNGHLVQRSPHPRQQGTTVSLQQLFYTLPVRHKEFQRNIKKEYG
KMIHILQSYCIISTGVRITCSNQNGQGKRSTVLSTSSSQSIRDNIGAIFGPKQLQSLLPF
QQASPTENVIEEYGLSGADLPKPLFLITGFVSRGDHGVGRSATDRQFFFINNRPCDPVKV
IKLVNEVYHMYNRHQYPFVALNISVASECVDVNVTPDKRQIFLQEEKLLLAVLKSSLISM
YEAGVNKISLNFSSLPSANTSASDICQPATFKDSRTEPNAESLTQSPKTSVNLAGFKAAF
ANQPCSSYGKKSSAMKVSNSGPTQKTLQSFLKGTPPPVVTSAMKQTKYSPAGKSALARFK
YGSSFGDTKAEEDSSSDITMAMPHNSVLELSSSEPDTYRTDVEDEIFGDSTSHSHPEGAE
SQTEQRPFDEDFSLIPDPKRARTEKQHFIIKPEPKDCSNNLDKSSLGVDSPVCLQRRKVP
LQFSLQELAAKMKRLQDQQAHRAKEDLRYRRFKAKINPGENQSAEAELKKEISKEMFKDM
EIIGQFNLGFIIAKLESDIFIIDQHATDEKYNFEMLQQHTVLKGQKLIAPQKLHLTAVSE
NTLIDNIDIFRKNGFEFQVDEDAQVMERVKLLSLPTSKNWTFGPADIEELIFMLSDSPGV
MCRPSRVRQMFASRACRKSVMIGTALSVNEMKKLLVHMGEIEHPWNCPHGRPTMRHLINL
DIISED
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgcccaatacctgcaatgacatgtcagctggaacaataaaggccattgacaagcactca
gtgcatcagatctgctcaggtcaagtggttttgactttggctactgctgtcaaagagctg
gtggaaaacagcatcgatgcaggggccaccaatattgatgtcaggctgaaggattgtgga
gctgacctagtggaagtgtcagacaatggaaaaggagtagaagaagccaactttgaagga
ctgacattaaaacatcacacgtcaaagctcagagaatttactgatctcatccatgtggaa
acatttggatttagaggtgaagccctcagttctttatgtgccctcagccatttgagtgtg
gtgacgtgccatgagtcttgccaggtggggaccaagctggtgtttgaccacaatgggcac
ttagtacagcggtctccccatccccgacagcaaggcaccacggtcagcctgcagcagctc
ttctacacactgcctgtccgacacaaggagtttcagcgcaatattaaaaaggagtatggt
aaaatgatccacatcctgcagtcctactgtattatctctactggtgtgcgtattacctgc
tctaatcaaaatgggcagggaaagcggagcacagttctcagcaccagtagcagccaaagc
atcagagacaatattggagctatatttggaccaaaacagctgcagagtcttctgccattt
cagcaagcatcccccacagaaaatgtcattgaagaatatggtctctctggtgcagatctt
cccaaaccgctgtttcttatcacaggctttgtgtcacgaggagaccatggtgttgggaga
agtgccacagacaggcagttctttttcattaacaatcggccatgcgaccccgtcaaggtg
attaaacttgtgaacgaagtgtatcatatgtacaacagacaccagtatccatttgttgcc
ttgaacatatccgttgcctccgagtgtgtggatgtgaacgtaacccctgacaaacgacag
attttccttcaggaagagaagctcctgttggctgttctgaagagctcactgattagcatg
tatgaggccggcgtcaacaagatcagcctgaacttttcttccctccccagtgccaataca
tcagcatctgacatctgtcaacctgccacatttaaggacagcaggacagaacccaatgca
gaatcactgactcagagcccaaaaacctccgtaaacctggctggcttcaaagccgccttt
gcaaatcaaccttgctccagttacgggaagaaatcgagtgcgatgaaagtatccaacagt
ggcccaacacaaaaaacactgcagtcgttccttaaaggaactccacccccagtggtgaca
tctgctatgaagcagaccaaatattctccagcaggaaagtcagcactcgctaggtttaag
tatggaagctcattcggtgatacaaaagctgaggaggacagcagtagtgacataaccatg
gcaatgccacataattctgttttggagttgagctcttcagaacctgatacctacagaacg
gatgtagaagatgaaatctttggagactcaaccagccacagtcatcctgaaggagcagag
tcacagactgagcagaggccttttgatgaggacttcagcctgatcccagatcccaagcgg
gcaagaacagagaaacaacatttcatcataaagccagagcccaaggactgttcaaacaat
ttagacaaatcctccctgggagtagattctccagtctgcctccaaaggaggaaggtgcct
cttcaattttccttacaggagctagctgcaaaaatgaagaggttacaggaccaacaggca
cacagggccaaggaggatctgcgctatcgacgcttcaaggccaaaatcaaccctggagaa
aaccagagcgctgaggccgagctcaaaaaagagatcagcaaagagatgtttaaagacatg
gagatcatcggtcagtttaacctgggattcatcatagccaaactggagtctgacatcttt
ataatcgaccaacatgccacagatgagaagtacaactttgagatgttgcagcagcacacg
gttctcaaaggacaaaagctcatagcccctcagaagcttcacctcactgctgtcagtgaa
aacaccctcatcgacaacattgacattttcagaaagaatggctttgaattccaggttgat
gaagatgctcaggtgatggagagggttaaactgctgtctctgcctacgagtaagaactgg
acctttggacctgctgacatcgaagagctgatcttcatgttgagtgacagcccgggggtc
atgtgcagaccctctcgtgtcaggcagatgtttgcctcccgcgcatgtcgaaaatctgtg
atgattggcacagctttgagtgtcaatgagatgaagaagctcctggttcacatgggggag
attgagcacccgtggaactgtcctcatggcagacccaccatgagacacctcatcaacctg
gacatcatctcagaggactaa
DBGET
integrated database retrieval system
