Takifugu flavidus (sansaifugu): 130538360
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Entry
130538360 CDS
T09160
Symbol
lamc1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04510
Focal adhesion
tfs04512
ECM-receptor interaction
tfs04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130538360 (lamc1)
04518 Integrin signaling
130538360 (lamc1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130538360 (lamc1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
Laminin_B
DUF745
Alanine_zipper
Motif
Other DBs
NCBI-GeneID:
130538360
NCBI-ProteinID:
XP_056911799
LinkDB
All DBs
Position
15:complement(5573214..5602791)
Genome browser
AA seq
1596 aa
AA seq
DB search
MSTLIRAAVAWSWLLLLLGVRAAMDECTDDRGNPQRCMPEFVNAAFNVTVVATNTCGSPP
EEYCVQTGATGVTKSCHICDARDPRNHHSAVYLTDYNNQQDTTWWQSQTMLAGIQYPNSI
NLTLHLGKAFDITYVRLKFHTSRPESFAIYKRSSQDGPWVPYQYYSGSCEKTYQKVNRGF
IRTGEDEQQAACTDDFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQDWVTATDIRVTL
NRLNTFGDEVFNDPKVLKSYYYAVSDFAVGGRCKCNGHASECVRNAEGRLVCNCKHNTEG
DDCGVCKAFYNQRPWRRATAESANECLPCDCNGKSSECYFDGELYRATGHGGHCRNCADN
TDGPNCERCLDNYHGALDGSGCLPCGCSAVGSESLQCDNRGVCTCKPGVTGDKCDRCQPG
FHSLTQAGCRPCACSPSGSTQECDVTTGQCRCKDNVEGFNCDRCKLGYFNLDHQNPLGCT
ACFCFQHSSVCESAEGFSVHTITSSFQRDDEHWTAQQRDGSSVSVQWSPSKQEVSLLSED
YFPLYFLAPDKFLGNQMLSYGQNLSLSFRVDRRDTRLSAEDLVLEGAGMRVAVPLIAQGN
AYPNENMQTYVFRLHDSTDYPWRPTISPADFQKLLHNLTAIKIRGTYSERSAGYLDDVSL
VTARQGSGLPARWVEKCTCPQGYQGQHCERCTPGYRRSRPHLGAFSACEPCSCNGHSDTC
GPDTGACDCQDNTAGLSCERCKDGFYGDASRGTPADCQPCPCPAGATCAVILRSREVVCT
NCPAGTTGKRCELCDDGFFGDPLGRSGPGRTCRACKCSDNFDPNAVGNCDRETGECLKCI
HNTDGFFCDRCKDGFYGNALASSPADKCKPCSCSPLGTVGGQSTCLQVTGQCPCHPNVAG
RDCGACQPGFFNLRSGSGCARCNCDPIGSTNGQCDIITGQCECQPGVTGLRCERCERDFF
GFSSSGCKPCDCDPEGSMLGQCKEDGRCECRPGFVGTRCDMCEENFFYNRSAPGCQQCPS
CYSLVRDKVNQQRQKLHELQTLIDNLSSGQETISDKAFEDRLKEAEKAIMELLEEAQTSK
DVDRALLEHLNTINNTLTTQWNRLQNIRNTVDNTSDQAGRAQTRVQDAKSLIERAQRELD
KARDAVSKVDIKPPSSVGDPNNMTLLAEEARALADRHKMEAEQIEKIAKDANDTSTKAYH
LLLKTLDGESKTSQEIDELNRKYNEAKDVAKNLEKQASKVQAEAEEAGDRALKIFANLTS
LPPFSTDALEAEANKIKKEAADLDKLIDKTEKEYNVLRDDLKAKEQEVRKLLEKGKSEQQ
TADQLLARADAAKALAEEAAKKGQSTFREAESILEDLRDFDKRVNDNKTAAEEAMKKIPF
INATIMAANQKTRQAEAALGNAAADAREAKTKAEEAERIASNVQKASTKTKEEAEKAFED
TSALDSEVDDMMDQLGSAEQELAKKAAEADRDMMMASMASDNAKEAEDNARKAKGAVKMV
LNTITALLDQLGNIDRVDLSKLNEIDESLKNAKGKMSDSDLDRKLAELNDMARTQEDMIN
DYDRQIREIHADIANLNDIKNTLPEGCFNTPSLERP
NT seq
4791 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacattgatccgggctgcggtggcctggtcctggctgctgctgctgctgggggtc
cgggctgccatggacgaatgtacggacgatcgtggcaacccgcagcgctgcatgccagag
ttcgtcaacgccgccttcaacgtgaccgttgtggccaccaacacctgcggctctccgccg
gaggagtactgcgtccagaccggagccaccggggtcaccaagtcctgccacatctgcgat
gcccgggatccccggaaccaccacagcgccgtgtacctgaccgactacaacaaccagcag
gacaccacctggtggcagagccagaccatgctggcggggatccagtaccccaactccatt
aacctgaccctgcacctcggtaaggccttcgacatcacttacgtccggctgaagtttcac
accagtcgccctgagagctttgccatctacaagaggagcagccaggacggcccctgggtg
ccctaccagtactacagcggctcctgtgagaagacgtaccagaaggtgaaccggggcttc
atccgcacaggtgaggatgagcagcaggccgcctgcactgacgacttcagcgacatctcg
ccgctcaccggtggcaacgtggccttctccacgctggagggccgccccagcgcctacaac
ttcgacaacagccccgtcctccaggactgggtgacggccacggacatcagagtgaccctg
aacaggctcaacacgttcggggacgaggttttcaacgaccccaaggtgctgaagtcctac
tactacgccgtctccgactttgctgttgggggaaggtgcaagtgtaacggccacgccagc
gagtgtgtgaggaacgcagaaggacggctggtgtgtaactgcaaacacaacacggagggc
gacgactgcggcgtctgcaaagccttctacaaccagcggccgtggcgaagggccacggca
gagagcgccaacgagtgtctgccctgcgactgtaacggcaagagcagcgagtgttacttt
gatggcgagctgtaccgggccaccggtcacgggggtcactgcaggaactgcgctgacaac
acagacggtcccaactgcgaacgctgccttgacaactaccacggcgccctcgatgggagc
ggctgtctgccctgtggctgcagcgctgtgggctcggagtccctgcagtgtgacaacaga
ggcgtgtgcacgtgtaagccaggagtgaccggagacaagtgtgaccgctgccagccaggc
ttccacagcctgactcaggccggctgcaggccctgcgcgtgctcgccctcaggcagcact
caggagtgtgacgtcaccacgggacaatgtcgctgcaaagacaacgtggagggtttcaac
tgtgacaggtgtaaactgggctacttcaacctggaccatcagaaccccctgggctgcacc
gcctgcttctgcttccagcattcgtccgtgtgtgagagcgcggagggtttcagcgtgcac
accatcacctcgtccttccagcgagatgatgagcactggactgctcagcagcgtgatggt
tccagtgtctcagtccagtggtcccccagtaaacaggaagtgtcgctcctctccgaggac
tactttcccttgtacttccttgctccagacaagttcttggggaaccaaatgctgagctat
ggacagaatctgagtctaagtttccgggtggaccggcgagacacgcggctctcagctgag
gacctggtcctggagggggctggcatgagggtagcggtccccctcattgcccagggcaac
gcctaccccaatgagaacatgcagacatatgtgttcaggctccacgacagcaccgactac
ccctggagaccaaccatcagccccgctgacttccagaagcttctccataatctgacggcc
atcaagattcgcggcacctacagtgagagaagtgccggttaccttgacgacgtctccctg
gtgacggccaggcagggttcgggacttccagcccgctgggtggagaagtgcacctgtcct
caaggttaccagggtcagcactgcgagcggtgcactcctgggtaccggcgctcgcggcca
cacctgggcgccttcagcgcctgcgagccctgcagctgtaacggccacagcgacacctgt
ggacccgatacaggagcgtgcgactgtcaggacaacacagctggcctgagctgtgaacgc
tgcaaagacggtttctatggcgacgccagtcgcgggacgccggctgactgtcagccgtgt
ccctgcccagctggagcgacctgtgctgtgatcctgaggagcagagaggtggtgtgcacc
aactgtccggcaggaaccacgggtaaacgctgtgaactctgtgacgacggcttcttcgga
gaccctctgggtcggagcggaccgggccgaacttgtcgcgcttgcaagtgcagcgataat
tttgacccaaatgcggtcgggaactgtgaccgtgaaaccggagaatgtctgaagtgcatc
cacaacacagacggcttcttctgcgaccgctgcaaggacggtttctatggaaacgccctc
gccagcagcccggccgacaaatgcaaaccttgctcctgttccccactgggaacagtggga
ggccagtccacctgtctccaggtcaccggccagtgtccctgtcaccccaacgtcgcaggg
cgggactgcggcgcctgtcagcccggcttcttcaatctacggagcgggagtggctgtgca
cggtgtaactgtgaccccatcggctccaccaatggccagtgtgacatcatcacgggacag
tgcgagtgtcagcctggcgtcaccggcctccgctgtgaacgctgcgaacgcgacttcttc
ggattcagctcctctggatgcaaaccttgtgactgtgacccggaaggctccatgttgggc
cagtgtaaagaagatggccgctgcgagtgtcggcctggttttgttggcactcgctgcgac
atgtgtgaggagaacttcttctacaaccggtcggctccgggatgccaacagtgtccgtcc
tgctacagcctggtcagagacaaggtgaaccagcagaggcagaagcttcacgagctgcaa
accctcattgacaacctcagctcaggacaggaaacgatcagcgacaaggccttcgaggac
cgcctcaaagaggcagaaaaggccatcatggagctcctggaggaggctcagaccagcaaa
gatgtggaccgagctctgttggagcacctgaacaccatcaacaacaccctaaccacccag
tggaaccgcctacagaacatccgaaacactgtggacaacaccagcgatcaggccggccga
gcccagaccagagtccaggacgccaagagcctgatcgagcgagcccagagggagctggac
aaagccagggatgctgtcagcaaagtggacatcaagcccccgagcagcgtgggagacccc
aataacatgacactgttggccgaggaagcgcgggcgctagcagacaggcacaagatggaa
gccgagcagattgagaaaattgccaaagatgccaatgacacatcgaccaaagcgtaccac
ctgctgctgaagactctcgatggagaatccaagaccagtcaggagattgacgagctcaac
aggaagtacaacgaggccaaagatgtggccaagaacctggagaaacaggccagcaaagtt
caggccgaggccgaggaagccggagacagagcgctgaagatctttgccaatctgaccagc
ctgcctcccttcagcacagacgctctggaggctgaagccaataagatcaagaaggaggca
gcggacctggacaaactgatcgataagaccgagaaggagtacaacgtcttaagagacgac
ctgaaagccaaagagcaggaagtccgcaaattattggaaaaaggcaaaagtgagcagcag
acggcagatcagcttttggctcgagctgatgctgccaaagctctggcagaggaggcggcc
aagaaaggccagtccaccttcagggaggcggagagcatcctggaggacctgcgagacttt
gacaaacgggtcaatgacaacaagacggctgctgaggaggccatgaagaagattcccttc
atcaacgccaccatcatggccgccaaccagaagaccaggcaggcggaggcggcgctcggc
aacgccgccgcagacgcccgagaggccaaaactaaggccgaggaggcggagcgtattgcc
agcaacgttcagaaggcttccaccaagaccaaggaggaggccgagaaggcgttcgaggac
acgagcgcgttggacagcgaggtggatgacatgatggaccagctgggctctgctgaacag
gaactggcaaagaaggcggccgaggcggaccgcgatatgatgatggcctccatggcatct
gacaacgccaaggaggccgaggacaacgcccgcaaggctaaaggggccgtcaagatggtc
ctgaacaccatcaccgccctgctggatcagctgggaaacatcgacagagtggatctgagc
aaactcaacgagatcgacgagtccctgaagaacgccaaaggcaagatgtccgacagcgat
ctggacaggaagctggcggagctgaacgacatggcacggacacaggaagacatgatcaat
gactacgatcggcagattcgggagatccacgccgacatcgccaacctcaacgacatcaaa
aacactttacccgaaggctgcttcaacacgccgtctctcgagaggccttag
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integrated database retrieval system