Takifugu flavidus (sansaifugu): 130538479
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Entry
130538479 CDS
T09160
Symbol
abca4b
Name
(RefSeq) retinal-specific phospholipid-transporting ATPase ABCA4 isoform X1
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
130538479 (abca4b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tfs02000
]
130538479 (abca4b)
Transporters [BR:
tfs02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
130538479 (abca4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
AAA_15
Tetraspanin
Motif
Other DBs
NCBI-GeneID:
130538479
NCBI-ProteinID:
XP_056912096
LinkDB
All DBs
Position
15:complement(11989262..12014055)
Genome browser
AA seq
2315 aa
AA seq
DB search
MKTGSQVRLLLWKNWTLRKRQKGRFFVEIFWPLLLFSGLVWLRKANPLYQQHECHFPNKA
MPSAGILPWLQGIFCNAHNPCFRYPTRGEAPGFVSNYHDSVLARFYVDAQELLLNEAEVQ
KLSRVWDDASSFSDFMETLRITPYVMSGRGLKIGDILKDDEVLTAFLLRDAELSDSVVFQ
LINAKIRLEQFAFGIPDLQLKDIACSQALLERFIIFPSRMGLHGVRNAMCAMSQQRLQKI
EDVLYANLDFFKIFKLMPQVLNQNSQGIDLHYWGQALKALSEKIQLLMQRDSSQELLRVV
SSLFQAGGPPTFTQLLSSVSSLFCGYPEGGGSRVLSFNWYEDNNYKVFLGVNGTKSHSYV
YDKSTTPFCNDLMQTLESNPVTKIVWNSVKPLLMGKILYTPNSPAVHKILKSANTTFEEL
ERLKNMAKAWEELGPQLWAFFHNSVQINMIRDTLRNPTVRHFMDNSLADANLTTNNILNF
LYTGPDEWREPGMPRFDWRNIFNVADQLLRVFNQFGECLDLDKFAAFTDESQMTHQALHL
LEKNKFWAGLVFADMYPWTTSVPPHVKYKIRMDIDAVERTNKIKDRYWDPGPRADPMEDQ
RYIWGGFAYLQDMIEHGIVKLHTGNDWPLGVYVQQMPYPCYVDDLFMITLNRCFPLFMVL
AWVYSVSMTVKGIVLEKELRLKETLKAMGVGNGVIWSTNFIDSFVMMTASTVLLTSIVMC
GKVLNYSDPLLVFFFLLTFTMATIMQCFLMSVFFNKANLAAACSGIIYFTLYLPHILCFA
WQDRITKNMKLAASLLSQVAFGFGTEYLSRYEEQGLGLQWDNIQTSPLEKDTFSFLMSIL
MMTFDAVLYAVLAWYLDNVFPGQYGIGRPFYFPFQASYWQTAAPPCAETADQVPDAENPP
EVQQDGDSSPENYNCNGSGSKKTCKHQNKRDLLEREKELLRHQEDTPNPEEEAGAEGQTF
FEADPVGLVLGVQVTDLVKVFDGSSRPAVDCLSINFYEGQITSFLGHNGAGKTTTMSILT
GLFPPTSGTAYINGRDIRTDIDSIRSSLGMCPQYNVLFKHLTVEEHILFYSLLKGRTQAE
AEREVEAMLVDLALPHKRDDEAQNLSGGMQRKLSVAMAFVGGSKVVILDEPTSGVDPYSR
RSIWDLLLKYRAGRTVILSTHHMDEADLLSDRIAIISKGQLHCSGTPLFLKNCFGVGFYL
TLVRRMKDLRKKENDCDCASDCSCSCSICTAYKDQSQNQSLHPDRVLDGNVDSISSLIHH
HVPEAKLIETIGQELTYLLPNKGFKHRAYASLFRELEETLADMGLSSFGISDTSLEEIFI
KVTADGEAANKSASPEQWMLKRRKNVSHDGGEELNAAQQPNGVTDGAPDSGAGKGSRQVK
GANLILKQFHALLVKRFHHAIRSQKDFLAQIVLPASFVLIALIFTTIVPPFGEYPSLTLT
PWMYGQQFTFFSNERPFDPTMKHFAERLLNSPGLGTCCMEGGPLEMPCSNSTSEWERPDV
SAVVDNILQSPEWTARNPSPSCQCSTSKKLTMMPICPAGAGGTPPYQRVETSGDTMLNLT
GRNISDYLVKTYPDLIRASLRSKYWVNEQRYGGLSFGGQLPVLEVEPTNIQRVFRQLGRM
FNITGGHYSGLALRDIGPFLRYMESEFNIKVWYNNKGWHAMVAFMNVANNAILRAFLPPH
AKAVQFGITAVNHPLNLTKEQLSEVTVLTTSVDAVVAICVIFAMSFIPASFVLYLIQERV
TTAKHLQFVSGVSPLVYWVANFFWDLMSYSLSAAMVVGIFVAFDKKCYTSASNLPALVAL
LLLYGWSVTPLMYPMSYVFNIPSTAYVSLSCINLFIGINTSAITFILELFENNRSLLAFN
EGLKKGLLVLPHFCLGRGLIDMAMNQAVTDVYARFGEEHMQDPFRWDFVGKNIAFMAAEG
FIYFTFNLLIQYRFFLNRWLPDRKQTLVQDEDDDVAAERQRVYVGGPTTDILQIRDLSKT
YVGRKRAAVDQICVGVAPGECFGLLGVNGAGKTTTFKMLTGDTDASSGEATVAGYSVLTE
ILDVHQNMGYCPQFDALDELLTGREHLYLYARLRGVPESEIPRVAEWGIRKLGLTEYAGC
CAGTYSGGNRRKLSTAIAMIGCPALVLLDEPTTGMDPHSRRFLWNAILSIIQDGRAVVLT
SHSMEECEALCTRLAIMVNGTFKCLGTIQHLKYKFGDGYIVTMKIKAAKEGLSPDLEPVE
SFMESSFPGCVQREKHYNTLQYKIASTSLARIFQLVVANKDRLSIEDYSVSQTTLDQVFV
NFAKQQTGEDDDPSTHRRGRKGRKEKKISPVKRKT
NT seq
6948 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaggttcccaagtccgtcttttactgtggaagaactggactctgcggaagagg
cagaaggggcgtttctttgttgagatcttctggccattgctgctgttcagcggtctggtg
tggctccggaaggccaacccactgtaccaacaacatgagtgtcatttccccaacaaggcg
atgccctctgcaggaattctgccctggctccagggcatcttctgcaatgcccacaatccc
tgcttcagatacccgaccagaggagaggcgccgggatttgtgtccaactaccacgactct
gtgctggcgaggttttacgtggacgcccaagaactcctgctcaatgaggctgaggtccag
aagctcagtcgcgtctgggacgatgcgtcgtccttctcggacttcatggaaactctacga
attactccatatgttatgtcaggccgcgggctgaagataggtgacattctgaaggacgat
gaggttctcaccgcctttcttctgcgagacgcggagctctctgattctgtagtcttccag
ctcatcaatgccaaaattcgactcgaacagttcgcctttggtatcccggaccttcaactg
aaagacatagcctgcagccaggccttgcttgaaagattcatcatttttcccagccgcatg
ggcctccacggggtccgcaacgcaatgtgcgctatgagtcagcaaaggttgcaaaagatc
gaggacgttttgtacgccaacctggacttcttcaaaatcttcaaactgatgcctcaggtg
ttaaaccaaaactcccaggggattgacctgcactactggggacaggccctgaaggcctta
tcagaaaagatccaactcctgatgcagcgggacagctctcaggagctcctgagggtggtc
tcctccctgtttcaagctgggggaccccccacgttcactcaactgctgtccagcgtgtcc
agcctcttctgtggatacccagagggagggggctccagagtactgtccttcaactggtat
gaggacaacaactacaaggtgttcttgggcgtcaacggcaccaagagccacagctacgtt
tacgacaagtccaccacccccttctgcaatgacctgatgcaaaccctggagtccaaccca
gtaacaaaaattgtgtggaattcagtcaagcccctgctgatgggaaagatcctgtacacc
cccaactcccccgccgtccacaagatattaaagagcgccaacactacatttgaagagttg
gagaggttgaaaaacatggccaaggcctgggaggagctgggacctcagctttgggctttc
ttccacaatagtgtccagatcaacatgatcagggacaccctgaggaacccaacagtgaga
cattttatggacaacagtttggcggacgccaacctcaccaccaataacatccttaacttc
ctgtacaccggcccagatgagtggagggagcccggcatgcccagatttgactggaggaat
atttttaacgtggctgaccaactgctgcgcgtgttcaaccagttcggggagtgtctcgac
ctggataagtttgcagcgttcacggacgagtcgcagatgacccaccaggccttgcacctg
ctggagaagaacaagttttgggctgggctcgtcttcgctgacatgtatccctggaccacg
agtgtgccgccgcatgttaagtacaagatccgcatggacatcgatgcggtggagcgcacc
aacaagataaaggacaggtactgggaccccggcccaagagcagaccccatggaggaccag
aggtacatctggggaggctttgcctacctgcaggacatgatcgagcacggcattgtcaag
cttcacacgggcaacgactggccgctcggggtgtacgtgcagcagatgccgtatccctgc
tacgtagatgacctcttcatgatcacgctgaaccgctgcttccccctcttcatggtgctg
gcctgggtctactctgtgtccatgactgtgaaaggcatcgtgctggagaaggagctacgc
ctcaaggagaccctcaaagccatgggggtgggcaacggagtgatttggtccaccaatttc
atcgacagcttcgtcatgatgacggcgagcacggtgctgctcacgtccatcgtcatgtgt
gggaaggtgctgaattacagcgaccccttgctcgtcttctttttcctgctgactttcacc
atggccacgatcatgcagtgtttcctgatgagcgtcttcttcaataaggccaacctggca
gccgcctgcagcggcatcatctacttcaccctctaccttccacacatcctctgctttgcc
tggcaggaccgcattaccaagaacatgaagctggctgctagcttgctgtcccaagtggcc
tttggctttgggacagagtacctttcgcgatatgaggagcagggtttgggtctgcagtgg
gacaacattcagaccagcccattagagaaagacaccttctctttcctcatgtccatcctc
atgatgacctttgacgccgtcctctatgctgtccttgcatggtatctggacaatgttttc
ccaggacagtatggcattggacgtccattctacttcccatttcaagcctcatactggcaa
actgctgcaccgccatgtgcagagacggctgatcaagttccagatgcagagaatccccct
gaggtgcagcaggacggagacagctccccagagaactacaactgcaatggctcaggcagc
aaaaagacctgtaagcaccaaaataagagagacctactagagagggagaaggaactgctg
agacaccaggaggacaccccaaacccggaggaggaggcaggagcagaaggtcagacgttc
ttcgaggccgacccagtgggtctggttctgggggtgcaagtcacggacctggtgaaggtg
tttgatggaagttctcgaccggcggtcgactgtctgagtatcaacttctacgagggccag
attacatccttcttgggacacaatggagccgggaaaactacaaccatgtccatcctgact
ggtctcttcccgcctacgtctggtaccgcctacatcaatggacgagacatccgcaccgac
atcgatagcatccgctcttctctggggatgtgtccccagtacaatgtcctctttaaacac
ctcacggtggaggagcacatccttttctactcgctgctgaaaggtcgcacgcaggcggag
gccgagcgggaggttgaggccatgttggtggacctcgcgttgcctcacaagagagacgac
gaggctcagaacctctcaggtgggatgcagaggaagttgtcggttgccatggcgttcgtt
ggcgggtcaaaggttgtcattttggacgaacccacctcaggagtagacccctattccagg
aggtccatttgggacctgctgctgaaatacagagctggccggacagtcattctctccact
catcacatggatgaagccgacctcctgagcgaccgcatcgccatcatctccaaagggcag
ctgcactgcagtggaacgccgcttttcctcaagaactgtttcggggtcggcttctacctg
acactcgtccgccggatgaaggacctgaggaagaaggagaacgactgcgactgtgcttca
gactgttcctgttcctgttccatctgcacggcgtacaaagatcagtcccagaaccagtcc
ctgcatccagacagggttctggacggcaatgtggacagcatcagcagcctcatccaccac
cacgtccctgaagccaaactgattgagaccatcggtcaggagctgacctacctgctcccc
aacaagggcttcaaacaccgagcgtacgccagcctgttcagggagctggaggagacgctc
gctgacatgggcctcagcagctttgggatctctgacacatcactggaggagatattcata
aaggtcaccgcagatggcgaagcagcgaataaatctgcctctcctgaacaatggatgtta
aagcggagaaaaaacgtcagccatgatggtggagaagaacttaatgcggcgcagcagcct
aacggcgtcaccgatggggcgccagacagcggtgcaggaaaaggctcccggcaggtgaaa
ggagccaatctgatcctgaaacagttccacgctctgttagtgaagaggtttcaccatgct
ataagaagccagaaagactttcttgctcagatcgtccttcctgccagttttgtcctcatc
gctctgatcttcaccacgatcgtcccaccgttcggagagtatcccagcctgactctgacg
ccctggatgtacggtcagcagttcaccttcttcagcaacgagcgaccttttgaccccacg
atgaaacactttgcggagcgtttactcaacagtcctggcctggggacttgctgcatggag
ggagggccactcgagatgccctgcagtaacagcacctcagagtgggaacgcccagacgtc
tctgccgtggtcgacaacatcctgcagagtcctgagtggaccgcgagaaacccatctcca
tcctgccagtgcagcaccagtaagaaacttaccatgatgcccatctgtcccgccggggcg
ggcggcacaccgccgtaccagcgggtggagacatcgggagacacgatgctaaacctgacg
ggcaggaacatctccgactacctggttaaaacctaccctgacctcatcagagccagcttg
aggagcaaatactgggtgaacgagcaaagatacggaggtttgtccttcgggggacagctg
cccgtcctggaggtggaacccacaaacatccagagggttttccgccaactgggacgaatg
ttcaacatcacagggggccactactccggtcttgccctgagagatatcggtccgttcctg
cgatatatggagagcgaattcaacataaaggtgtggtacaataacaaaggctggcacgcc
atggtggccttcatgaatgtggccaataacgccatcctcagagcctttctgccgccacac
gccaaggccgtgcagtttggaatcactgccgtcaatcaccctctgaacctcaccaaagag
cagctatctgaagtcactgtgctgaccacctctgtggacgccgtggtggcgatctgtgtc
atcttcgccatgtccttcatccccgccagctttgtcctctacctcatccaggagcgcgtg
accaccgccaagcacctccagttcgtcagtggggtcagccctctggtttactgggtggca
aactttttctgggacctgatgagctactcgctcagcgctgccatggtggtcggcattttc
gtggcatttgacaaaaagtgctacacatcagcatcaaacctaccagcattagtcgctctg
cttctgctctacggatggtcggtcacacccttgatgtatcccatgtcctacgtgtttaac
atcccgagcactgcgtacgtctcgctgtcctgcatcaacctgttcataggcatcaacacc
agcgccatcaccttcatcctggagctttttgaaaacaaccggtctctgctagcgttcaac
gaggggctgaagaaaggcctgctggtgctccctcacttctgcctggggcgaggcctcatc
gatatggccatgaaccaggctgtcacggatgtctatgccagatttggggaagagcacatg
caggaccctttccgctgggactttgtgggaaaaaacattgcttttatggcggcggaaggc
ttcatctactttactttcaatctcctgatccagtatcgcttcttcttaaaccgctggcta
ccagaccgtaaacagactttggtgcaggatgaggacgatgatgtggctgctgagaggcag
agggtttacgttggaggccccacaacagacatcctgcagatcagagacctgtccaagacc
tatgtgggcaggaagagggcggctgttgaccagatctgtgtcggcgtcgctcctggagag
tgcttcggtctgctgggagttaacggagctggaaagacgaccaccttcaaaatgctgacg
ggtgacacggatgccagctctggggaggccactgtggcggggtacagcgtcctgacagag
atcctggacgtgcaccagaacatgggttactgcccacagtttgatgccctcgatgagctg
ctgacgggccgggagcatctatacctctacgctcgtctccggggggtccctgagtcagag
atccccagagtggcagagtggggcatcaggaagctgggactgaccgagtatgcaggctgc
tgtgctggaacctacagcggaggcaacagacgcaaactgtccacagctatcgcgatgatt
ggctgccccgcactggtgctgctggatgagccgacaactgggatggacccccactcacgg
cgcttcctctggaatgccatattgagcatcattcaggacggccgggccgtggtgctgaca
tcccacagtatggaagaatgcgaggccctctgtactcgactagcaatcatggtcaatggg
accttcaagtgtctgggaacaatccagcatctcaaatacaagtttggtgatggttacatc
gtgaccatgaaaatcaaggcagctaaagagggtttgtcaccagatctggagcctgttgag
agcttcatggagagcagtttccccggctgtgttcagagggagaagcactacaacacttta
cagtacaagatcgcctccacctccttagcccggatatttcagctggtggtggcgaacaaa
gacaggctcagcattgaagattactctgtttcccagacaacactggaccaggtgttcgtc
aactttgccaagcaacagacaggggaggatgacgatccttcgacacacagacggggaaga
aaaggaagaaaagagaaaaagatttcaccagtgaagagaaaaacatga
DBGET
integrated database retrieval system
