Takifugu flavidus (sansaifugu): 130538552
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Entry
130538552 CDS
T09160
Symbol
rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130538552 (rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tfs01009
]
130538552 (rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfs04131
]
130538552 (rb1cc1)
03029 Mitochondrial biogenesis [BR:
tfs03029
]
130538552 (rb1cc1)
Protein phosphatases and associated proteins [BR:
tfs01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130538552 (rb1cc1)
Membrane trafficking [BR:
tfs04131
]
Autophagy
Autophagosome formation proteins
ULK complex
130538552 (rb1cc1)
Mitochondrial biogenesis [BR:
tfs03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
130538552 (rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
kleA_kleC
Motif
Other DBs
NCBI-GeneID:
130538552
NCBI-ProteinID:
XP_056912232
LinkDB
All DBs
Position
15:13352026..13360979
Genome browser
AA seq
1614 aa
AA seq
DB search
MKLYVFQVNNGSTLTFDTDLAVQTVLELKHAIQTKYKIAIQHQVLVVNGGECMVAERRVC
SYSAGTETNPIFLFNKEMILSDRDPAIPKTTFSIESEIQVKVEESLLMPAVFHTVASRTQ
LALEMFEVANKLSSFCERLVHDEHLQHQGWAAIMANLEDCTTSCQKLLLKFENSYLSYQQ
DLEEIKTKLSKLGTAVAVMARIPLLECLTRQSYRESVERSGSTPGKESDETEEGEKSTDS
VLRAGPGSSESPGGGQETGEMSDSGGLRAILDEAANPTCFNVTLLDWINVQDRPNDVESV
VRKCFESINRLDPRIIQPFLGDCRDTIAKLDNHNMKSIKGLEDRLYALDQMIASCKKLVN
EQKELAQGFLANQKRAENLKDTSVLPDLCLSHTNQLMIMLNNHRKLLDIKKKCTTAKQEL
TNNLQVRLKWCCYVMLHADQDGEKVQALLRLLTELLERVRVVEALSNVPQMYCLAVAEVV
RRKMFMRHYREWAYSLVKDGKLLYDAEKLKRESFGKLFRENSLFHVCFFPGSLAHPVCVL
SGKSFLRNRLFKGLDSWPPRAFCTQKPRRFDDELPDISVEDLQYLKSCCPVEVQPFLMVP
AVCDFEPLNRHVDALHHLVQAAQSVDEMSQTITDLLSEQRESYSRSSHRSTATTPQSESI
AGTTASASSKTPPSLSLQGTSCQALHVPVPAPLEDLSPDSIDAQTFDFETIGHPNMDPVL
QQGSLDLDSLAESPESDFMSAVNEFVIEETLTSPNPISDPTSPEMMVESLYSSVINAIDS
KRMQDTTILERENARVAAFRRVIEKYQSAAEETRSGVRSVKDDLCHLRTAVLKEQKDFGF
VLRSVGAEVQNICHDHQLETTERHQKELLSLRQELEEQVRTLTEENQVNRNIVRDVQRAM
LDLEGLVERKEKELVQLENEKERLAEAERKQKDLIRNLEQATSRQEEEIEVLAASNGSLS
ARLKDLHAEIERSRKEIREELEVAEQTRLKELEDQLKQEHQAELESLSEENHKALEDLAA
ENGAKLIETLDQHASELGEKERRVKDLECRSAELAELRCKLEVELALKEAETEELRGLFE
EARTQQAEAVRSRVESETRDLREELACVQKQLRLKNEEYEVHLSELRTLMRIEKDHCISE
LVDRHDEEAVALRNEIASLREQAEDAARAHGEQQERLRQEAEQKVCAAVEEKGRQWRSFQ
DLEQELRTLIGKLQAENELLSKKVDAHSSETDASRAASSDAFEELQQQKDEMEQKLLENI
RHLETELQQRPPSKSDGGLSLHAERSADAAAPLSLDSAIQERLQQERASLQSQMELLEKQ
KNEEIQNLKTSLIAEQQTNFNTVLTREKLKKEQIISELTEKLRNVTQQQDKDKALIETLS
EDRASVMQEKKHLEEELNRLRSAALVSSAFFATNPPAQELPRAGADGVARALPGGGACSS
EPTPETDRLASVAEYEGVDSAVEASMVAVHENMLMSEEKQRILLLERTLHMKEEENKRLS
QRLMSQSMSSVSSRHSDKIAIRDFQVGDLVLIILDERHDNYVLFTVGPTLYFLHSESLTA
LDLKPASGTSRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNRKV
NT seq
4845 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtgttccaggtcaacaatggcagcacgttgacgtttgacaccgacctc
gccgtccagaccgtgctggaactcaaacatgccatccaaaccaaatacaagatcgccatc
cagcaccaggtcctcgtggtcaacggaggcgagtgcatggtggcggagcggcgtgtgtgc
agctacagcgccggcactgaaaccaaccccatcttcctgttcaacaaagagatgatcctg
agcgaccgggatcccgccatccccaaaaccaccttctccatcgagagcgagatccaggtg
aaggtggaggagtccctcctgatgccggctgtctttcacaccgtcgcctcgcggacgcaa
ctcgccctggaaatgtttgaagtggccaacaaactgagctccttctgcgagcggttggtg
cacgacgaacacctccagcaccagggctgggccgccatcatggccaacctggaggactgc
accacgtcctgtcagaagctgctgctcaagttcgaaaactcctatttaagttaccaacag
gacctggaagagataaagaccaagctgtcaaagttggggacggccgtggccgtcatggcc
aggatccctctgctggagtgtctgacgcgccagagctacagagagagcgtggagcggtcc
ggctccaccccggggaaggagtccgacgagacggaggagggagagaagtccacggattcg
gtgctccgcgccggccccgggtcctcggagtcgcccggcggaggccaggagaccggcgag
atgagcgacagcggcgggctgagggccatcttggacgaggccgccaacccgacctgcttc
aacgtcaccctgctggactggatcaacgtgcaggaccggcccaacgacgtggagtcggtg
gtcaggaagtgcttcgagtccatcaacaggctggacccccgcatcatccagcccttcctg
ggcgactgccgcgacaccatcgccaagctggataaccacaacatgaagtccatcaagggg
ctggaggaccgactctacgccctcgaccagatgatcgcgagctgcaagaagctggtgaac
gagcagaaggaactcgctcagggatttttggccaatcagaagcgagcggagaacctgaag
gacacgtcggttctgccggacttgtgtctgagccacaccaaccagctgatgatcatgctg
aacaaccacaggaagctgctggacatcaagaagaagtgcaccaccgccaagcaggagctc
acaaacaacctccaagtccgcctcaaatggtgctgctacgtgatgctccacgcggaccag
gacggcgagaaggtccaggctctgctccggctgctgacggagctgctggagagggtgagg
gtggtggaggccctcagcaacgtcccgcagatgtactgcctggcggtggcggaggtggtc
aggaggaagatgttcatgcgccactacagagagtgggcgtattcgctggtgaaggacggg
aagctgctgtacgacgcagagaagctgaagagggaatcgttcgggaagctcttccgtgag
aactctttatttcacgtctgcttcttcccgggatcgttggctcatcctgtttgtgtcctc
tcagggaaatccttcctcaggaaccgcctgtttaaaggactggattcatggccccccagg
gccttttgtacgcagaagcccaggaggttcgacgacgagcttcctgacatctccgtcgag
gacctgcagtacctgaaatcgtgctgccctgtcgaggtgcagccgttcctaatggttccc
gccgtgtgtgactttgaacccttaaatcgccacgtcgacgcccttcaccacctggtccag
gctgctcagagtgtggacgagatgtctcaaacgatcaccgacctgttaagcgaacaaagg
gaatcgtacagtcggagctcgcatagatcaaccgccacgaccccgcagtctgaaagcata
gcggggacgacggcgtccgcgtcctccaaaacccccccctcgctcagtcttcagggaacc
agctgccaggcccttcatgttccggtcccggctcctctggaggacttatccccagacagc
atcgacgctcagacgtttgactttgaaaccatcggccaccccaacatggatccagtgttg
cagcagggctccctggatctggattctctggcagagagtccagagtccgacttcatgtct
gccgtcaatgaattcgtcatcgaggagaccctgacctccccgaaccccatcagcgacccc
accagccccgaaatgatggtggagtctctctattcctcggtgattaacgccatcgacagc
aaacgcatgcaggacacgacaatcctggagagggagaacgccagggtcgccgccttccga
cgggtcatcgagaagtatcagtcggctgcagaggagacccggagcggcgttcggagcgtg
aaggacgacctctgtcacctgagaaccgccgtgttaaaagagcagaaggactttgggttt
gtcctgaggagcgtgggcgcagaggtgcaaaacatctgccacgaccaccaactggagacg
acggagcggcaccagaaggagcttctgtccctccggcaagagctggaagagcaggtccgg
acgctaacggaggaaaaccaagtcaatcggaacatcgtccgggacgtccagcgcgcgatg
ctcgacctggaggggctcgtggagcgcaaggagaaggagctggtccagctcgagaatgag
aaggagcgcttggccgaggcggagaggaagcagaaggatctgatccggaacctggagcag
gcgaccagcaggcaggaggaggagatcgaggtgctcgcggcttccaacggctccctgtcc
gctcgcctgaaggatctgcacgctgagatcgaacgcagtcggaaggagatccgggaggag
ctggaggttgcggagcagacccggttgaaagagctggaggaccagttgaagcaggaacac
caggcggagctcgagagcctcagcgaggagaaccacaaggccctggaggatctggctgct
gagaacggcgccaagctgatcgagactctggatcagcacgccagcgagctcggagagaag
gaaaggcgggtgaaggacttggagtgtcgcagcgcggagctcgcagagctgcgctgcaaa
ctggaggtggagttggccctcaaggaggcggagacggaggagctgagggggttgtttgag
gaggccaggacgcagcaggccgaggctgtgaggtcccgggtggaatcggagaccagggac
ctcagggaggagctcgcgtgcgtccagaaacagctccgcttgaagaacgaggagtacgag
gtgcacctgtccgaactgaggaccctcatgaggatcgagaaggaccactgcatctccgag
ctggtggacaggcacgacgaggaggccgtcgcgctgcgcaacgagatcgcctccctccgg
gagcaggcggaggacgccgcgagggctcacggcgagcagcaggagaggcttcggcaggag
gccgagcagaaggtctgcgctgcggtggaggagaaaggacggcagtggaggagcttccag
gacctggagcaggagctgaggactcttatcggcaagttgcaggcagaaaacgagctgctg
tccaaaaaagtggacgcacacagcagtgaaacggacgcgtcgcgggcggcgtcttcagac
gccttcgaggaactccagcagcagaaggacgagatggagcagaagctcctcgagaacatt
cgacacctggagacggagcttcagcagaggccaccctcaaaaagtgacggagggctgtcg
ctgcacgccgagcggagcgccgacgccgcagccccgctgtccttggactccgccatccag
gagcgtctgcagcaggagcgggcttccctgcagtctcagatggagctcctggagaagcag
aagaacgaagagatccagaacctcaaaacctctctgatcgccgagcagcagactaacttc
aacaccgttctaacccgcgagaagctcaagaaggagcagatcatcagcgagctgacggag
aagctgcggaacgtcactcagcagcaggacaaggacaaagcgctgattgagacgctgtcg
gaggaccgagccagcgtcatgcaggagaagaagcacttggaagaggagctgaaccgcctg
cgcagcgccgccttggtctcctccgccttcttcgccaccaaccccccggctcaggagctt
cctcgcgccggagcagacggcgtagcgcgggctctgcccgggggcggggcttgttcctcc
gagcccacgcccgaaaccgacaggctggcctctgtcgcggaatacgaaggggtggattcg
gcggtggaagccagcatggtcgcagtccacgagaacatgctgatgtccgaggagaaacag
cggatcctcctgctggagcggacgttacacatgaaagaggaggagaacaaacgcctcagt
cagagactgatgtctcagagcatgtcgtctgtgtcctcgcggcactctgataaaatcgcc
attcgagatttccaagtaggcgatttggttctcatcatcctggacgagagacacgacaac
tacgtgctgttcacggtgggacccaccctctacttcctccactcggagtccctcaccgcg
cttgacctcaaaccagcctcggggacgtcgaggcggccgtgggtcctcggaaaggtgatg
gagaaggaatactgtcaagccaaaaaggctcagaacaggttcaaggttcctttggggaca
aagttctacagagtgaaagctgttccatggaacaggaaagtatag
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integrated database retrieval system
