Takifugu flavidus (sansaifugu): 130538601
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Entry
130538601 CDS
T09160
Symbol
rnf220a
Name
(RefSeq) E3 ubiquitin-protein ligase RNF220a isoform X1
KO
K25174
E3 ubiquitin-protein ligase RNF220 [EC:
2.3.2.27
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfs04121
]
130538601 (rnf220a)
Enzymes [BR:
tfs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130538601 (rnf220a)
Ubiquitin system [BR:
tfs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130538601 (rnf220a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF220
Pox_A_type_inc
Motif
Other DBs
NCBI-GeneID:
130538601
NCBI-ProteinID:
XP_056912327
LinkDB
All DBs
Position
15:complement(3651527..3757357)
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AA seq
693 aa
AA seq
DB search
MDLHRAAFKMESSSYLPNPLASPALMVLASTAEASRDASIPCQQPRPFGVPVSVEKDVHL
PFNNGSYTFASMYHRQGAVPPGFPNRDFPPSLLHLHHQFAPPNLDCSPISMLNHSGVGAF
RPFASPEDRDGAPGGYQSAFTPAKRLKGSLDAEASPHLRYSDAEGKEYDFGGAQIPPGGS
PSSALKAVEDSGKKIFAVSGLLSDRETSSSPEDRIERCKKKISLYDSQAPICPICQVLLR
PGELQEHMETEIERLANICLSKNPSPKDGAATPGTPKSMMLSVHIKREGESPVVSPLSSE
DIHHSDRYQTFLRVRANRQSRLNARIGKMKRRKPEDGGQVCPLCSAPLTGSEEEMSRHVE
QCLIQREGALGDDDSGDMDGESGRGFEEYEWAGQKRIRATALLEGGFRGTGFATCNIKES
AADSDADLDVDGDDTLEYGKAQYTEADIIPCSGAGEDQGEAREREALRGAVLNGGMPSNR
ITPEFSKWANDEMPSTSNGESSKTESSTPSASSAPRTCKNSEIEKVTEEESTATTMEALK
ARIRELERQIQRGDRYKCLICMRKPALQSGTEIRSLRVWPGPRPLANEVGERQAKSLPLG
LYCLYRGLVIGGYGSSIKRLLPQPVRRVAGSVAPHAALLSGSVAVGCVVPWTPTRCRSPP
SSAGTSTVKSAGSGLWATRNCVRSATPSPHLET
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggacctccacagggcggccttcaagatggagagctcctcctacctgcccaatccactg
gcctccccggccctcatggtcctcgcttccactgctgaagcctctcgcgacgcttccatt
ccctgccagcagccgcgtccgtttggcgtccccgtttctgtagagaaggacgtgcatttg
ccatttaacaatggttcttacacttttgcctcaatgtaccaccgccaaggtgcagtgccc
ccaggattccccaacagggactttcctccatcccttctgcatctccatcaccagtttgct
ccgcccaatctggactgctctccaatcagcatgctcaatcacagcggcgttggtgccttc
aggcccttcgcctctccagaagatcgggacggggcaccaggcgggtaccagtctgccttc
acaccagccaagcgcctcaaaggcagcctggacgcagaagcttcacctcacctgcgatac
tctgatgccgaggggaaagagtatgactttggtggtgctcagatccctcctggcggctcc
cccagcagtgccctgaaagccgtggaggacagcgggaagaagatctttgctgtgtcaggc
ctcctttctgatcgagagacctcctccagccccgaggatcgaattgaacgctgtaaaaag
aagatatctctgtatgacagccaggctccgatctgccccatctgccaggtactgctcagg
cctggagagcttcaggagcacatggagacagaaatagagaggctggctaacatctgcctc
agcaagaacccctcgcccaaggatggagcagccactccaggaacccccaagtcaatgatg
ctgtcggtgcacatcaagcgtgagggagaatctcctgtggtctcacctctgtcctctgaa
gacatccaccactccgacagataccagacgtttttacgtgttcgagctaacaggcaatca
agattgaatgcccgtatagggaagatgaagaggaggaagcctgaggatgggggccaggta
tgtccgctgtgcagtgcccccttgactgggagtgaggaggagatgagtagacatgtggaa
caatgcctgatccagcgtgagggtgcattaggagatgatgattccggtgacatggatgga
gagagtgggcggggctttgaggagtacgagtgggccggacagaagaggatcagagccacg
gctttgctggaaggtggattcagaggaacagggttcgccacgtgtaatatcaaagagagc
gccgcagacagcgacgcggacctcgacgtggacggagacgacaccttagagtacggcaag
gcccagtacaccgaggccgacatcatcccctgttctggagcgggagaggaccaaggcgag
gccagggagagggaggcgctacgaggagccgtgctcaatggcgggatgccctccaacaga
ataacgcctgaattctccaagtgggccaatgacgagatgccttcaacaagcaacggagaa
agcagcaaaacagagtccagcactccttcagcttcctctgccccgcgcacgtgtaaaaac
agtgagattgaaaaagtaacggaggaggagtccacggccaccaccatggaggctctgaag
gcccggatcagagagctggagaggcagatacagcgaggagatcgatacaagtgtctcatc
tgcatgaggaagcctgctctccagtcaggcacagagatcaggagcctaagggtgtggcca
gggccgcggccgctggccaatgaggtcggagaaaggcaggctaagtccctcccacttggc
ctgtactgcctgtataggggccttgtgattggaggctacggcagcagcataaagaggctc
ctcccacagcccgtacggagggttgctggttccgttgctccccatgctgccttgctgagt
gggtctgtggctgttggctgtgttgtgccatggactcctacacgatgccgctcacctcca
tccagtgctggcacgtccactgtgaagagtgctggctcaggactctgggcaacaagaaac
tgtgtccgcagtgcaacaccatcacctcacctggagacctga
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