KEGG   Takifugu flavidus (sansaifugu): 130538709
Entry
130538709         CDS       T09160                                 
Symbol
cop1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
tfs  Takifugu flavidus (sansaifugu)
Pathway
tfs04115  p53 signaling pathway
tfs04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:tfs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    130538709 (cop1)
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    130538709 (cop1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tfs04121]
    130538709 (cop1)
Enzymes [BR:tfs01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     130538709 (cop1)
Ubiquitin system [BR:tfs04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    130538709 (cop1)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     130538709 (cop1)
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_EIPR1 WDR55 Beta-prop_RIG_2nd zf-C3HC4_2 EIF3I Beta-prop_WDR19_1st Beta-prop_TEP1_C zf-C3HC4 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 zf-RING_2 Beta-prop_EML zf-RING_UBOX Beta-prop_DCAF4 zf-C3HC4_4 zf-C3HC4_3 zf-RING_5 Beta-prop_WDR90_POC16_2nd RING_XB3-XBAT31 WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_Vps41 WD40_like Beta-prop_IFT140_1st Beta-prop_IFT122_1st zf-rbx1 zf-RING_10 UvrD-helicase zf_C2H2_10
Other DBs
NCBI-GeneID: 130538709
NCBI-ProteinID: XP_056912544
LinkDB
Position
15:complement(6998078..7008810)
AA seq 703 aa
MSGNRPQQNAGGASSVPGTSSGTSNSNGGGSNAAISNGNNSGTVVPSRTLAAASGLSVPT
LAAVPSGRGGFASLSRPSGSSGSRKKAHHQTPLYNGLLNSYEDKSNDFVCPICFEMIEEA
HMTKCGHSFCFKCIRQSLEDSNRCPKCNYIVDNVDQLYPNFLVNELILKQKQMSEEKRLK
LDHPNGSRWQIFQDALNPDQENLDLANVNLMLELLIQKKKQLEAESQAAQRQILMEFLKE
ARRNKKEQLEQLQKELNFLEEDIKRVEEMSGLYSPMEAECTVPNVEAPSPAPSCSSIIDP
PDYSQPPGFGGTNQGKRQTWYNSTLASRRKRLTAHFEDLEQCYFSNKMSHITEESRNMNQ
LDDFMECLAKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVF
EYGTVIQDAVDIHYPVNEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQKSKV
YQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVCCVKFSPTSR
YHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVG
KPHCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLD
KDKKEDDTNEFVSAVCWRALPDGESNVLIAANSQGTIKVLELV
NT seq 2112 nt   +upstreamnt  +downstreamnt
atgtcgggcaaccggccacagcaaaatgctggtggggcgagttctgtgcccggcacaagc
agcggtaccagcaattcaaacggtggtggatccaacgccgccatcagtaacggtaacaat
tctggaactgttgtgccctctcggaccttggcagctgccagcggcttgtcggtgccaact
ttggccgctgtgccgtctggccggggcggtttcgcatctctgagcagaccctccggatct
tcaggcagcagaaagaaagcccatcatcaaactcccctttacaatggcttgttgaattca
tacgaagacaaaagcaacgattttgtttgccccatctgcttcgaaatgattgaagaggca
catatgacaaagtgtggacacagtttttgttttaaatgtatccgtcaaagcctggaagat
agcaacagatgccccaaatgtaactatattgtggacaatgtggatcagctttacccaaac
tttcttgtcaatgaactgatcctgaaacagaaacaaatgtcagaggagaagagactgaaa
ttagaccatcctaatgggtctaggtggcagatattccaggatgctttgaatcctgaccag
gagaacttggacctggcaaatgtcaatctgatgctggagctcctgatccaaaagaagaag
cagctggaggcggaatcccaggcagctcagagacaaatcctgatggagtttctgaaagaa
gcccggagaaacaagaaagagcaactagaacaactgcagaaagagttaaacttccttgaa
gaagacattaagcgtgttgaggagatgagcgggctgtactctccgatggaggctgaatgc
acagtacctaatgttgaggctccatcaccagcgcccagctgtagtagtattatagacccg
ccagactacagccagcctcccggatttggtggaacaaaccagggcaagaggcagacgtgg
tacaacagcacactggcatcaagaaggaaaagattgacagctcactttgaggatctggag
cagtgctacttctccaacaaaatgtcgcacatcacagaggaaagtcggaacatgaaccag
ttggacgattttatggagtgtctggctaaatttacccgctacaattctgtacgccctctt
gccactctctcatatgccagcgacctctataatggctccagtattgtttcgagtattgag
tttgaccgtgactgtgactattttgccattgctggtgtgaccaagaagatcaaggtgttt
gagtatggcacagtaatccaggatgcagttgacatccactatcccgttaatgaaatgacc
tgcaattccaaaatcagctgtatcagctggagcagctaccacaagaaccttctcgccagc
agcgactatgagggcaccgtcattctgtgggatggattcacaggccagaagtccaaagtc
taccaggaacatgaaaaaaggtgttggagtgttgacttcaatctcatggaccccaaactt
ctagcctctggttctgatgacgctaaagtgaagttatggtccaccaaccttgacaactct
gtagccagcatcgaggccaaagctaatgtctgctgtgttaaattcagtccaacctccagg
tatcatctggcctttggctgtgcagaccactgtgtccattactatgatctgcgtaacact
aagcagccgatcatggtgttcaagggtcacaggaaggccgtgtcctatgccaagtttgtc
agcggagaagaaattgtttctgcgtcaacagacagtcagctaaagctgtggaatgtcggc
aaacctcactgtctgcgttccttcaagggtcacatcaatgagaagaactttgtgggtctg
gcttctaatggagattatattgcctgtggcagtgaaaacaactccctatatctttactac
aaaggactttccaagacactgttaaccttcaaatttgatacagtaaaaagtgtcctggac
aaagacaagaaggaggatgacaccaatgagtttgtgagtgctgtgtgctggagagcactg
cccgatggggaatccaatgtactgattgctgcaaacagtcaaggaacaatcaaggttctt
gaactcgtctga

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