Takifugu flavidus (sansaifugu): 130539001 Help Entry 130539001         CDS       T09160                                  Name (RefSeq) collagen alpha-1(I) chain-like   KO K06237   collagen type IV alpha Organism tfs  Takifugu flavidus (sansaifugu) Pathway tfs04382   Cornified envelope formation tfs04510   Focal adhesion tfs04512   ECM-receptor interaction tfs04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:tfs00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     130539001  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     130539001   09142 Cell motility    04820 Cytoskeleton in muscle cells     130539001  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     130539001  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:tfs04147]     130539001    00536 Glycosaminoglycan binding proteins [BR:tfs00536]     130539001 Exosome [BR:tfs04147]  Exosomal proteins   Exosomal proteins of other cancer cells    130539001 Glycosaminoglycan binding proteins [BR:tfs00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    130539001 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen Motif Other DBs NCBI-GeneID:  130539001 NCBI-ProteinID:  XP_056913042 LinkDB All DBs Position 15:complement(6375561..6389644) Genome browser AA seq 1359 aa AA seqDB search MGSSVPAVTLQHVRWTFVLVVMVQQLNAGEIEGPCQGRDCLVCQCLPAKGAQGPPGKPGQ QGPRGPMGASGHKGPAGAKGRQGAEGLHGPEGLRGARGPDGAPGFLGNNGSSGHPGAGGE PGLPGLDGCNGKKGPPGVPGSTGLKGVHGPLGLPGPKGKKGEPLFSSVGPGERGKDGEYG RPGKKGSAGPKGHTGPPGLPGAKGLNGHKGVRGPPGEPGGSFVGDKGDDGEQGPPGPQGQ EEVIHSPQYTLPPKGYKGDKGLPGPCGPKGMRGSLSEYTETVKGEQGIFGFHGIPGLPGF PGNNGPPGPEGIPGERGLPGLNGVTGPKGEPGDQGSPGPLEYYKENDVRGPKGDHGHPGS PGLPGDLGLMGLPGPAGPPGSTVPDRLAITGHRGVPGPKGYKGEPGKYLNLDINSLLGIK GVKGHRGRKGEPGLQGHRDYYCEPGYPGEPGDVGPKGPPGFKGVKGWQGECACIPDRGYP GPPGPEGYKGLPGLPGTPGQKGEPGHKGNEGPRGPPGDQGVPGLYGQKGQKGDLFVAGIK GTKGDQGFPGNPGIPGATGRPGVDGFPGPIGDQGPPGTGYVGVPGPKGYPGVFGNKGHPG PAGPPGPGFPGPRGIPGLIGNHGHPGNPGISGHPGPPGETEQCCHEPEVGPRGPKGEPGS PGIPGIQGRDGFQGSEGHPGPKGLKGDDGEIEGTGLPGPQGSNGDPGDPGAFGISLDGPP GPPGLTGPPGMKGIPGDVISTRPGAPGPPGPRGRAGSKGLHGIPGSPGSQGVPGQVGRPG YKGEPGLNGDKGATGPQGLSCIICDLHALLGPIGPTGNPGVRGLPGLLGQKGIRGDTGST GHGQKGSQGVPGPPGPPGPAGPRGTIGSLGDPGIDGPPGQKGETGYPGKPGLSGLPGHLG LPGPKGKQGERGFNGRRGPPGHPGVPGKKGLRGPPGLPGPSLLINLGKGPNGLTGRNGKP GEAGPPGSKGPRGPPGDSGPEGDPGLVGFKGSPGSPGRFGLPGPPGHPGIKGFPGQQGYP GDVGDQGDPGPQGQPGISGVTGLKGIKGEPGRSYGKPGPVGPKGLPGDDGPCAPRGSPGD VGQSGQQGRPGNPGQRGILGKPGRQGGQGYPGPQGPLGNPGVPGYPGDPGILGSPGPPGP YGPPGPPGPPGLDGLNGLRGEKGMKGTTDIPGPPGPPGLTGVKGVRGQPGLPGPNMPGPK VRGAHLVRQVFLVFPENLVVPAMSAAYQWLAKMENLDLKVPQAPQVLQAGLALQVGSFLS TETLAQVACLVYMVAKDRKVSQDLLAPQATKDSRDQKVNQGDPMESLDQLDLKDYLEMMD PVVIQVFQVIQVILASWDHQVHQDLMGLQDHPDHQALMG NT seq 4080 nt NT seq  +upstreamnt  +downstreamnt atggggtcatcagttcctgctgtcacactgcaacatgtcagatggacttttgtacttgtc gtcatggtgcagcagctcaatgcaggggagatcgagggcccttgtcaagggagagactgt ttggtgtgtcagtgtctccctgccaaaggagcccagggacctccaggcaagccaggtcaa caaggccccagaggaccaatgggagcaagtggacataaggggccagctggagcaaaaggc cgtcaaggagcagaggggctgcacgggccagaggggttgagaggagcccgtgggccagat ggggctcctggttttcttggcaataatggctcctcaggccaccctggagcagggggagag cctggtttaccaggactggatggttgtaatgggaagaaaggtccaccaggagttccagga tctactggtctgaaaggtgtgcacgggccactgggattacctggaccaaaaggaaagaaa ggagaacctttattctcttctgtaggacctggggagcgtggtaaagatggagaatatggg cgacctggaaaaaagggaagcgctggaccaaaaggccacactggacctccggggcttcct ggagctaagggcttgaatgggcataaaggtgtgagaggaccaccaggtgaacctgggggg tcatttgtaggagacaaaggagacgatggagagcaaggcccacctggtccacaaggccaa gaagaagtcatccattcccctcaatatacacttccacccaaaggttacaagggagacaaa ggccttcctggaccatgtggaccaaaaggcatgcgtggtagcctcagtgagtacactgaa acagttaaaggagagcaaggaatatttggtttccatggcattccgggtcttccgggattt cctggaaataatggaccaccaggacctgagggtatcccaggagaaagaggccttccaggt ctcaatggagtaactggaccaaagggtgagccgggagatcagggttctcctggtccccta gaatactataaagaaaatgatgtcagaggtcctaaaggtgaccatggacatcctggttca ccaggactgccaggggaccttgggcttatgggcctgcctggacctgctggtcctccagga tcaacggttccagacagacttgctattactggtcaccggggggttcctggtcccaagggc tacaagggagagccaggaaagtatctcaatttagacatcaattcacttttgggaataaag ggagtaaaaggacaccgtggacgtaaaggtgaacctggcctccaaggccatcgagattac tattgtgagcctggttacccgggggagcctggagatgttggtccaaaaggtcctcctgga tttaagggagtaaaaggttggcagggggaatgtgcatgtattcctgatagaggttaccct ggaccccctggtccagaaggctataaaggactaccaggtctacctggaactccagggcaa aagggagaaccaggacataaaggaaatgaaggtcccagagggccacctggggatcaaggc gttcctggtttatatggacagaaaggtcaaaaaggtgatctctttgttgcagggattaaa ggtaccaagggtgaccaagggtttcctggaaatcctggcattcctggagcgaccggtagg ccaggagttgatggcttccctggccccataggagaccaaggccccccaggtactggatat gttggagtacctggacccaaaggttatcctggtgtttttggaaataaaggacatccaggg cctgcaggtccaccaggccctggatttcccggtcctaggggtatccctggactaatagga aatcacggacatcctggcaatccaggaatttcaggacatccaggtcctccaggtgaaact gagcagtgctgtcatgaaccggaagttggaccccgtggtccaaagggtgagccaggttca ccaggcattccaggcatacaaggaagagatggtttccaggggtcagaagggcaccctggt cctaaaggactgaagggagatgatggtgaaattgaagggactggactgccaggacctcaa gggtcaaatggggatccaggtgacccaggtgcttttggaattagtctggatggccctcca gggccccctggtttaacaggccctccaggcatgaagggtataccaggagatgttatttcc accaggcctggtgcccccggcccacctggtccccgtggaagagcggggtccaaaggactt catggaattcctggtagcccagggtctcaaggtgtaccaggccaagttggaagaccaggt tacaaaggggagccaggacttaatggggataaaggagccactggtccacaaggattatct tgtattatatgtgaccttcatgcccttctaggtccaataggaccaactggaaatcctgga gtgaggggattgccaggtctcctaggtcagaagggaatcaggggagatacaggttcaacc ggtcacggacaaaaggggtcacaaggtgttcctggccctcctggtcctccaggtccagct ggaccaagaggaacaataggctccttaggagatcctggaatagatggtccaccaggacag aaaggtgaaacagggtacccgggtaagcccgggttaagtgggttaccaggtcaccttgga cttccaggccctaaaggtaaacaaggagagaggggatttaacggccgccgaggtccccca ggacacccaggagtgcctggtaaaaaaggtttgcgtggtccaccgggattaccaggacca tcactgcttataaacttgggaaaaggcccaaacggacttacaggaagaaatggcaaacct ggagaagcaggaccaccaggatccaagggcccgagaggaccaccaggggattcaggacct gagggagacccaggtttggttggatttaaaggcagccctggttctccgggcaggtttgga ctaccaggaccaccagggcatcccggtattaaaggttttcctggtcaacaggggtatcct ggagatgttggtgatcagggagatccaggtccacaaggtcaaccaggtatctcaggcgtg actgggttaaaagggattaagggtgaaccagggcgatcctatggaaagcctggaccagtt ggacctaaaggattacctggagatgatggaccctgtgcacctagagggagtccaggagat gtaggtcagtcaggacaacaagggagaccgggaaatcctggacaacgagggattttgggg aaaccaggaagacaagggggacaaggttatcctgggcctcaaggcccattaggtaatcca ggtgttccaggttatccaggtgatcctggcatcctgggatcaccaggtccaccaggacct tatgggcctccaggaccacccggaccaccaggccttgatgggctgaatggtctgagggga gaaaaaggcatgaaagggactactgatatcccaggccctccgggtccacctggtcttact ggagttaaaggtgtcagaggccaaccaggactaccaggtcccaatatgccagggcccaag gtcagaggggcccacctggtgagacaggtcttcctggtcttcccggaaaacctggttgtc ccggctatgagtgccgcttaccagtggctggccaaaatggagaacttggatttgaaggtc ccccaggctccccaggtcctccaggcaggcctggccctgcaggtaggatcatttttatca acggaaaccctggcccaggtggcttgcctggtttacatggttgcaaaggacagaaaggtc tcccaggacctattggctccccaggctaccaaggactcccgggaccaaaaggtgaaccag ggcgatcctatggaaagcctggaccagttggacctaaaggattacctggagatgatggac cctgtggtaatccaggtgttccaggttatccaggtgatcctggcatcctgggatcaccag gtccaccaggaccttatgggcctccaggaccacccggaccaccaggccttgatgggctga

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