KEGG   Takifugu flavidus (sansaifugu): 130539034
Entry
130539034         CDS       T09160                                 
Name
(RefSeq) RNA-binding protein MEX3B-like
  KO
K15686  RNA-binding protein MEX3 [EC:2.3.2.27]
Organism
tfs  Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:tfs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tfs03019]
    130539034
   04121 Ubiquitin system [BR:tfs04121]
    130539034
Enzymes [BR:tfs01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     130539034
Messenger RNA biogenesis [BR:tfs03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     130539034
Ubiquitin system [BR:tfs04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    130539034
SSDB
Motif
Pfam: KH_1 KH_Vigilin zf-C3HC4_3 KH-I_KHDC4-BBP zf-RING_2 KH_BICC1_1st KH_2 zf-C3HC4 RING_XB3-XBAT31 KH_DEAH11_2nd zf-RING_5 Prok-RING_4
Other DBs
NCBI-GeneID: 130539034
NCBI-ProteinID: XP_056913084
LinkDB
Position
15:458308..465864
AA seq 648 aa
MPSPLFHPEIMDHDVVISSQHGGVGLSRETDQESREEDHQEALRFALDQLSLMALEKVDG
GGGGLVDSLDGTQVPGSEGCNGVGGGGYVDLQMLDHANGSRDSPSSCSPSPEYYGSGGYH
MAGSHSMIHGEQSSVLCNRKRSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIK
TPVRGEEPVFIVTGRKEDVEMAKREIVSAAEHFSMIRASRCKAGGSGGGSLPGPPHLPGQ
TTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSREKDPVFEVTGMPENVDRAREE
IETHITLRTGTFVDLQGDNDFHSNGTDVSLEGLGALSAGLGASLWSRATNHHSAPPPPPS
SPPPTLPVSMHHSSNRKMSSSVAYHAHNGMSSDGFGAGRKANEGGSPTSPFSTGSSAGGG
GFTFGGDSTPGLPSSEDLGFEFSASNIWAPFVNGGAGGKAGGSAQQQPLRRNSSGLSGGA
ITPRLSPTLPQDSGVGPLDHPLARRAQSDPLSTLSWLQSSGTGGGSFSGASSSSSGGSST
GYSSCSASSLPGGSPTDSEGGGSGVALTSGMLSRLKGGSGPGATGLVGVSPGINRDCFVC
FESEVTAALVPCGHNLFCMECAGQICQSPEAECPVCHTPTTQCIRIFS
NT seq 1947 nt   +upstreamnt  +downstreamnt
atgcctagtcctttattccaccccgagattatggaccacgacgtggtgatcagcagccag
cacggcggggtcggtctttcccgggaaacggaccaggagtcccgggaagaagaccaccag
gaagccctccgcttcgccctggaccagctgtcactcatggccctggagaaggtggacggc
gggggcggcggtttagttgacagcctggacgggacgcaggtccccggttctgaaggctgc
aacggcgtgggcggcgggggctacgtggatctacagatgctggaccatgccaacgggtcc
cgggactcgccgtcgtcgtgctccccgtccccggagtactacggctctggcggctaccac
atggccgggtcccactccatgattcacggggaacaaagctccgtcctctgcaacaggaaa
agaagcgtcaacatgacggagtgtgtccccgtccccagctccgagcatgtggcggagata
gtggggagacaaggttgtaagatcaaagccctgcgggccaagaccaacacctacataaag
acccccgtcaggggggaggagcctgtgttcatcgtcacgggacgcaaggaggacgtggag
atggccaaacgggagatcgtctcggcggccgagcatttctccatgatccgggcctcccgc
tgcaaagctggcggcagcggcggcggctctctgcccggaccgccgcacctccccggacag
accaccatccaggtgagggttccctacagggtcgtcgggctggtcgtcgggccgaagggg
gcgaccatcaaacggatccagcagcagacccacacctacatcgtgacgcccagcagggag
aaagacccggtgttcgaggtgaccggaatgccggagaacgtggaccgggcgagggaggag
atcgagacccacatcaccctacggacaggaacctttgtggacctccagggagacaacgac
ttccactccaacggcaccgacgtcagcctggagggcctgggcgccctgagcgccggtctg
ggggcgtctctgtggtccagggccaccaaccaccactccgccccgccccctcccccgtcc
tctccgcccccgactctgcccgtatccatgcaccactcctccaaccgcaagatgtcctcc
tccgtcgcctaccacgcgcacaacgggatgagctcggacggcttcggcgccggccgcaag
gccaacgagggcggcagcccgacgagtcctttcagcacgggcagcagcgccggagggggc
gggttcaccttcgggggcgactccacccccgggctgccgtcctcggaggacctgggcttt
gaattcagtgcttccaacatctgggcgccgttcgttaacggcggcgcgggcggcaaggcg
ggcggctccgcccagcagcagcctctgcgccggaacagcagcgggctcagcggcggcgcc
atcaccccccggttgtcccccactctgcctcaggactcgggcgtgggcccgctggatcac
ccgctggcccgccgcgcccagagcgaccccctcagcaccctctcctggctccagtccagc
ggcaccgggggcgggtccttctccggcgcctccagctccagctccgggggctcgtccacc
ggttactcctcctgctcggcctcttcgctccccggcggctcccccaccgactccgaaggg
ggcggcagcggcgtggccttgacttccgggatgctgagcaggctgaagggcggctcgggc
cccggggcgacgggcctggtgggcgtgagcccggggatcaacagggactgcttcgtgtgt
ttcgagagcgaggtcacggcggctctggtgccctgcggccacaacctgttctgcatggag
tgcgccggacagatctgccagtcgccggaggccgagtgcccggtgtgccacacccccacc
acccagtgcatccgcatcttctcctaa

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