Takifugu flavidus (sansaifugu): 130539127
Help
Entry
130539127 CDS
T09160
Symbol
ubtfl
Name
(RefSeq) upstream binding transcription factor, like isoform X1
KO
K09273
upstream-binding transcription factor
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfs03000
]
130539127 (ubtfl)
03021 Transcription machinery [BR:
tfs03021
]
130539127 (ubtfl)
Transcription factors [BR:
tfs03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
130539127 (ubtfl)
Transcription machinery [BR:
tfs03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
130539127 (ubtfl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_5
HMG_box
HMG_box_2
DUF4473
HMG_WDHD1
DUF5870
Motif
Other DBs
NCBI-GeneID:
130539127
NCBI-ProteinID:
XP_056913233
LinkDB
All DBs
Position
15:complement(5312966..5320352)
Genome browser
AA seq
721 aa
AA seq
DB search
MVTDAVTNNTLKGGGGGVFCLTMNGSTSVSRAQSGRVKGDPDEWSKEDCLTLLERIRSLL
PDGDGMKYKTTESHFDWEKVCFGSFTGDMCRQKWQKVSTEVRKYRTMTELIVDAIEFVKN
PYKGKKLKTHPDFPKKPLTPYFRFFMEKRAKYAKIHPEMSNLDLTKILSKKYKELPDKKK
QKYITEFQREKEEFEKNMARFKEDHPELIEERKKSELPEKPKTPQQLWYNHEKKAYMKLH
PEVSQKELKEALRRQWSQLSDKRRLKWISKALELQKDYEGSMRAYHEAHPDTNSDDHVRS
VLTKAERQLKDKFDGRPTKPPPNGYSLYCAELMVNMKDVPSTERMVLCSKRWKLMTQKEK
DMFQKRCEQKKKQYDIDLQRFLESLPEEERERVMTEEKMCGTRVGGGVASSPHRARSPSV
KEQPVEAEPEHWLPTGVTKERRDGKKSVKLPETPKTAEEMWQHSVIGDYLAKYRSDRRKA
QVGMEAAWKSMEKKEKIPWIKKAAEDQKRYERELLEMRTLPAGQSHRKHKFDGEPKKPPV
SGYQMFSQELLTNGELNHFSLKERMVEIGKRWHKLSAAQKDKYKKLVEEQQVEYKVELEA
WLKSLTPQDRAVYKELSSSKRRSSAKARSSPEVKVRVTAKAKAVGSRAAAPAVGVAKRVM
AYRAKQDMSDSDEEEEKSESSDSDEDETSGSTDSEEDDEENEDDDDEDQSSSDESSDSDS
D
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggttacagatgccgttacaaacaatacactgaagggcggagggggcggagttttctgc
ctcaccatgaatggcagcaccagtgtctccagagcccagagtggaagggtcaaaggtgac
ccagatgagtggagtaaagaggactgtctgactctcctggagaggattcgcagtctgctg
cctgatggagacgggatgaagtataaaaccacagagtcgcacttcgactgggagaaagtt
tgtttcggcagcttcaccggagacatgtgtcgccagaaatggcagaaggtctccacagag
gtccgaaaataccgaacgatgacggagctcatcgtcgatgccatcgagtttgtgaagaat
ccctacaaaggcaagaaactgaagactcatccagatttcccaaagaagcctttgactccg
tatttccgcttcttcatggaaaaacgagccaaatacgccaaaatccaccctgagatgagc
aacctggacctgacgaagatcctgtccaagaagtataaagaacttcctgacaagaagaag
caaaaatacatcacagagttccagcgagagaaagaagagtttgagaagaacatggctcga
ttcaaggaggatcatccagagctgatagaagagaggaagaagtcagagctgccagagaaa
cccaaaactccccaacagctgtggtacaaccatgagaagaaggcctacatgaagctgcac
ccagaggtcagtcagaaggagctgaaggaggcactgaggaggcagtggtcccaactgtct
gacaagaggaggctgaagtggatcagcaaggccctggagctccagaaggactatgagggc
agcatgagagcgtatcatgaagcccaccccgacaccaactccgatgatcacgttcgctcc
gttctgaccaaagctgagcgccagctgaaggacaagtttgatgggcggccaacaaaacct
ccaccgaatggttactctctgtactgcgcggagctgatggtgaacatgaaggacgttccg
agcaccgagcggatggttctctgcagcaaacggtggaagttgatgacacaaaaagagaag
gatatgttccagaagcgctgcgagcagaagaaaaagcagtacgacatcgacctgcagagg
ttcctggagagtcttccagaggaggagcgagagcgggtcatgaccgaggagaagatgtgc
gggaccagggtgggagggggcgtggcctccagtcctcaccgtgcacggtccccttctgtc
aaggaacagccggtggaggcggagccagagcactggttacccactggagtcacaaaagag
aggcgtgatgggaagaagtcggtgaagcttccagagacaccaaaaactgcggaggagatg
tggcagcacagtgtgatcggagactatctggccaaatacagaagcgaccgcaggaaggcc
caggtgggcatggaggctgcctggaaatccatggagaagaaggagaagattccctggatt
aagaaggcagcagaggaccagaagcgctacgagagggagctgttggagatgaggacgctg
ccagcggggcagagtcacaggaaacacaagttcgacggagaacccaagaagcctccagtg
agtggctatcagatgttctcccaggagctgctgaccaacggcgagctcaaccacttcagc
ctgaaggagcggatggtggagatcggcaagaggtggcacaagctcagcgctgctcagaag
gacaagtacaagaagctggtggaggagcaacaggtggagtacaaggtggagctggaggcg
tggctcaagtccttgaccccgcaggaccgcgccgtctacaaggagctctcctcttcgaaa
cgtcgcagcagcgctaaagctcgcagcagtcctgaggtcaaggttcgcgtcacggcaaag
gcgaaggctgtgggctccagagccgcagcgccagcggtcggggtggccaagagggtcatg
gcttaccgagcaaagcaggacatgtcagactccgatgaggaggaggagaagagcgaatcg
tctgactccgatgaagatgaaacgtcaggatccacggacagcgaggaagacgatgaagag
aacgaggatgacgatgatgaagaccagagctcctctgatgaatcaagtgactctgactcc
gactag
DBGET
integrated database retrieval system
