Takifugu flavidus (sansaifugu): 130539442
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Entry
130539442 CDS
T09160
Symbol
pms1
Name
(RefSeq) PMS1 protein homolog 1
KO
K10864
DNA mismatch repair protein PMS1
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfs03400
]
130539442 (pms1)
DNA repair and recombination proteins [BR:
tfs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
130539442 (pms1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
HMG_box
HMG_box_2
HATPase_c
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
130539442
NCBI-ProteinID:
XP_056913758
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All DBs
Position
1:1922716..1935627
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AA seq
888 aa
AA seq
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MKQLPPDTVRLLSSSQVITSVVNVVKELLENSLDAGATSIDVKLENYGLERIEVRDNGHG
IKAADTPVMAVRHFTSKICTHDDLEHLETYGFRGEALGSVCAVAEVTVITKTEEDDVSTQ
YTLNFTGGIVSKKPSHLGQGTTVSVLKLFKNLPVRRQYYSSTKKCKEELKKVQDLLLAYA
IIKPELRLTLVHNKVVLWQKAKVPDHRSALVATLGPGVVVNLLPCHHRQEQPEIFLEGFF
PKPGADYSSTSSSNPDKTFIFVNNRPVHHKDIMKLLRQHYTAQYPDDGSRSRYPVLMLSL
TVSPSSVDVNLTPDKTQVLLHDKEAVLIALEAFLVSLYGFRPTDDPPALRPLSSETSCVP
SEAAWPEEEASLAPTDLFGDADAAVRADAPPDSQTSNGSSSSSLAEDWIVNQMPAGSESN
ASLHDQNDLLSAETNVINKLPEMLEDNASTDECRGQFSAEDWSRGTALTDPVSGRPLQPV
SIHQPPQTNVSAPDQALSSPDKKTLNAITEKRATLTAYDLISSRAMRAPLSPAALFEKEA
RADVLREKPAAGLQDISAAVHERWKNLREEDRKKYEEKAQKHQAQHEQRTKLASAEGPAE
TTLGTRGQKRKAPPSNQKLLDKLFSAQPQKKSGTPAPKPSLPLPCNIPSLRLRLQRLSSQ
SSAVPRGLRLVNQLASRSAWVISCGQRLMLLNPFRVEEALLFKRLLENNILPAVSLQTPI
QLTDGSLGGAEYTKALCSMEKQSPELSGEVFFCDPRLVANGFKVRLIPALPSAERHLEVT
AMADCVPFLGVEDLREILTAVLHGKARSVKECRPLKVTNYLKGEAVRLVRQLPASPSRAD
VEETLRRMERQLGEKNRTCIHGRPFLQHMGDVPSSEEEAREMLRPLEL
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagctgcctccagacacggtgcggcttctgtccagctcccaggtcatcacgtct
gtggttaatgttgtcaaagagctgttggaaaattccctggatgctggggccaccagcatt
gacgtcaagctggagaactatggtctggagcgaatagaggtccgtgataacggtcatgga
atcaaagctgcggacacccccgtgatggccgtcaggcatttcacgtcaaagatctgcacc
cacgatgatctggagcatctggagacgtacggcttccgaggagaggccctgggttcggtc
tgtgccgtggctgaggtgacagtcatcacgaagacagaggaggacgacgtcagcactcag
tacacacttaatttcacaggagggattgtttcaaagaagccatctcacttaggtcaagga
acaactgtgagcgtgctgaagcttttcaagaatctcccagtgagacgacaatactattct
tctaccaagaaatgcaaagaggaactgaagaaagtgcaggacctgctgttggcttacgcc
attatcaagcctgaactgaggctcactttggttcacaacaaagtggtgttgtggcagaag
gccaaagtccccgatcacaggagcgctctcgttgccacgttggggcccggtgtcgttgtc
aacttgctcccttgccaccatcgccaggagcaaccagagatttttttagaaggctttttt
ccaaagccgggagcagactactcctctacaagctcctcaaaccctgacaaaacatttata
ttcgtcaacaacagacccgtccaccacaaagacatcatgaagctgttgcggcagcactac
actgcacagtatccggatgatggatcccgaagccgttatcccgtccttatgctcagcctc
accgtgtctccatcctcggtcgatgtcaacctgaccccggacaagacccaggttcttctt
cacgacaaggaggccgtgcttatcgccctggaggcatttctggtgtccttgtatggcttt
cggcctactgatgaccctccagctctgaggccgctcagctccgagacatcgtgcgtaccc
tctgaagcggcgtggcccgaggaggaggccagcctcgcccccacagacctctttggtgac
gctgatgcagcagtaagggctgacgctccaccggacagccagacctcaaacggcagctcg
tcatcctctctagcagaggactggatcgttaaccagatgccagctggttctgagtctaac
gcgtccctccacgaccaaaacgaccttctgtctgcagaaacaaacgtaataaacaagcta
cctgagatgctggaggacaacgcctccacagacgagtgcagaggccagttctcagctgag
gactggagccgtggcacagctttgactgaccccgtctcaggaaggccccttcagcccgtc
agtatccaccaaccaccacagaccaacgtctctgctccagaccaggctctgagcagcccc
gacaaaaagacgctgaacgccataacggagaaacgcgctacgctgacggcttatgacctg
atcagcagccgggccatgagggcacctctgtcccccgccgctctgttcgagaaggaggcc
agggccgacgtcctgagggagaaacccgcagccggcctgcaggatatcagcgccgctgtt
cacgagaggtggaaaaatctgagggaggaagatcgcaaaaagtatgaagagaaggcccag
aagcaccaggcgcagcacgagcagaggaccaaactggcctctgctgaaggtcccgccgag
acaactctgggcacgaggggccagaaacgcaaggccccgccgtccaaccagaaactgctg
gacaagctcttctccgcacagcctcagaagaagagcgggactcctgcccccaagccctcg
ctgccccttccctgcaacattccctcccttcggctgcggcttcagcgcctttcctcccag
agcagcgcggtgccacggggcctccgtcttgtaaaccaactggcctctcggagcgcctgg
gtcatttcatgcggtcagaggctcatgttgttaaacccatttcgagtggaggaagccttg
ctgtttaagagacttctagagaataatatactcccagcagtgagtctgcagacccctata
cagttaacagatggaagtctaggaggagcagaatataccaaagccttgtgcagcatggag
aaacagagccccgaattaagcggagaggtgttcttctgtgatccccggctcgttgccaat
ggctttaaagtcagactcatcccagcgctcccgtcagctgagagacatctggaagtgacg
gccatggcggactgcgtgcctttcctcggtgtggaggacctcagggagatcctgaccgca
gttcttcacgggaaggcgcggagcgtgaaagagtgtcgaccacttaaagtcacaaactac
ttaaaaggcgaagcggtgcgacttgtccgtcagctgcccgcgagtccgtcccgggcggac
gtggaggaaacgctgcggaggatggagcggcagcttggtgagaagaaccggacctgcatc
cacggccgacccttcctccaacacatgggcgacgtcccttcttcagaagaagaagccaga
gagatgctgaggcctctggagctgtga
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