KEGG   Takifugu flavidus (sansaifugu): 130539442
Entry
130539442         CDS       T09160                                 
Symbol
pms1
Name
(RefSeq) PMS1 protein homolog 1
  KO
K10864  DNA mismatch repair protein PMS1
Organism
tfs  Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:tfs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tfs03400]
    130539442 (pms1)
DNA repair and recombination proteins [BR:tfs03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    MutL homologs
     130539442 (pms1)
SSDB
Motif
Pfam: DNA_mis_repair HATPase_c_3 HMG_box HMG_box_2 HATPase_c HMG_WDHD1
Other DBs
NCBI-GeneID: 130539442
NCBI-ProteinID: XP_056913758
LinkDB
Position
1:1922716..1935627
AA seq 888 aa
MKQLPPDTVRLLSSSQVITSVVNVVKELLENSLDAGATSIDVKLENYGLERIEVRDNGHG
IKAADTPVMAVRHFTSKICTHDDLEHLETYGFRGEALGSVCAVAEVTVITKTEEDDVSTQ
YTLNFTGGIVSKKPSHLGQGTTVSVLKLFKNLPVRRQYYSSTKKCKEELKKVQDLLLAYA
IIKPELRLTLVHNKVVLWQKAKVPDHRSALVATLGPGVVVNLLPCHHRQEQPEIFLEGFF
PKPGADYSSTSSSNPDKTFIFVNNRPVHHKDIMKLLRQHYTAQYPDDGSRSRYPVLMLSL
TVSPSSVDVNLTPDKTQVLLHDKEAVLIALEAFLVSLYGFRPTDDPPALRPLSSETSCVP
SEAAWPEEEASLAPTDLFGDADAAVRADAPPDSQTSNGSSSSSLAEDWIVNQMPAGSESN
ASLHDQNDLLSAETNVINKLPEMLEDNASTDECRGQFSAEDWSRGTALTDPVSGRPLQPV
SIHQPPQTNVSAPDQALSSPDKKTLNAITEKRATLTAYDLISSRAMRAPLSPAALFEKEA
RADVLREKPAAGLQDISAAVHERWKNLREEDRKKYEEKAQKHQAQHEQRTKLASAEGPAE
TTLGTRGQKRKAPPSNQKLLDKLFSAQPQKKSGTPAPKPSLPLPCNIPSLRLRLQRLSSQ
SSAVPRGLRLVNQLASRSAWVISCGQRLMLLNPFRVEEALLFKRLLENNILPAVSLQTPI
QLTDGSLGGAEYTKALCSMEKQSPELSGEVFFCDPRLVANGFKVRLIPALPSAERHLEVT
AMADCVPFLGVEDLREILTAVLHGKARSVKECRPLKVTNYLKGEAVRLVRQLPASPSRAD
VEETLRRMERQLGEKNRTCIHGRPFLQHMGDVPSSEEEAREMLRPLEL
NT seq 2667 nt   +upstreamnt  +downstreamnt
atgaagcagctgcctccagacacggtgcggcttctgtccagctcccaggtcatcacgtct
gtggttaatgttgtcaaagagctgttggaaaattccctggatgctggggccaccagcatt
gacgtcaagctggagaactatggtctggagcgaatagaggtccgtgataacggtcatgga
atcaaagctgcggacacccccgtgatggccgtcaggcatttcacgtcaaagatctgcacc
cacgatgatctggagcatctggagacgtacggcttccgaggagaggccctgggttcggtc
tgtgccgtggctgaggtgacagtcatcacgaagacagaggaggacgacgtcagcactcag
tacacacttaatttcacaggagggattgtttcaaagaagccatctcacttaggtcaagga
acaactgtgagcgtgctgaagcttttcaagaatctcccagtgagacgacaatactattct
tctaccaagaaatgcaaagaggaactgaagaaagtgcaggacctgctgttggcttacgcc
attatcaagcctgaactgaggctcactttggttcacaacaaagtggtgttgtggcagaag
gccaaagtccccgatcacaggagcgctctcgttgccacgttggggcccggtgtcgttgtc
aacttgctcccttgccaccatcgccaggagcaaccagagatttttttagaaggctttttt
ccaaagccgggagcagactactcctctacaagctcctcaaaccctgacaaaacatttata
ttcgtcaacaacagacccgtccaccacaaagacatcatgaagctgttgcggcagcactac
actgcacagtatccggatgatggatcccgaagccgttatcccgtccttatgctcagcctc
accgtgtctccatcctcggtcgatgtcaacctgaccccggacaagacccaggttcttctt
cacgacaaggaggccgtgcttatcgccctggaggcatttctggtgtccttgtatggcttt
cggcctactgatgaccctccagctctgaggccgctcagctccgagacatcgtgcgtaccc
tctgaagcggcgtggcccgaggaggaggccagcctcgcccccacagacctctttggtgac
gctgatgcagcagtaagggctgacgctccaccggacagccagacctcaaacggcagctcg
tcatcctctctagcagaggactggatcgttaaccagatgccagctggttctgagtctaac
gcgtccctccacgaccaaaacgaccttctgtctgcagaaacaaacgtaataaacaagcta
cctgagatgctggaggacaacgcctccacagacgagtgcagaggccagttctcagctgag
gactggagccgtggcacagctttgactgaccccgtctcaggaaggccccttcagcccgtc
agtatccaccaaccaccacagaccaacgtctctgctccagaccaggctctgagcagcccc
gacaaaaagacgctgaacgccataacggagaaacgcgctacgctgacggcttatgacctg
atcagcagccgggccatgagggcacctctgtcccccgccgctctgttcgagaaggaggcc
agggccgacgtcctgagggagaaacccgcagccggcctgcaggatatcagcgccgctgtt
cacgagaggtggaaaaatctgagggaggaagatcgcaaaaagtatgaagagaaggcccag
aagcaccaggcgcagcacgagcagaggaccaaactggcctctgctgaaggtcccgccgag
acaactctgggcacgaggggccagaaacgcaaggccccgccgtccaaccagaaactgctg
gacaagctcttctccgcacagcctcagaagaagagcgggactcctgcccccaagccctcg
ctgccccttccctgcaacattccctcccttcggctgcggcttcagcgcctttcctcccag
agcagcgcggtgccacggggcctccgtcttgtaaaccaactggcctctcggagcgcctgg
gtcatttcatgcggtcagaggctcatgttgttaaacccatttcgagtggaggaagccttg
ctgtttaagagacttctagagaataatatactcccagcagtgagtctgcagacccctata
cagttaacagatggaagtctaggaggagcagaatataccaaagccttgtgcagcatggag
aaacagagccccgaattaagcggagaggtgttcttctgtgatccccggctcgttgccaat
ggctttaaagtcagactcatcccagcgctcccgtcagctgagagacatctggaagtgacg
gccatggcggactgcgtgcctttcctcggtgtggaggacctcagggagatcctgaccgca
gttcttcacgggaaggcgcggagcgtgaaagagtgtcgaccacttaaagtcacaaactac
ttaaaaggcgaagcggtgcgacttgtccgtcagctgcccgcgagtccgtcccgggcggac
gtggaggaaacgctgcggaggatggagcggcagcttggtgagaagaaccggacctgcatc
cacggccgacccttcctccaacacatgggcgacgtcccttcttcagaagaagaagccaga
gagatgctgaggcctctggagctgtga

DBGET integrated database retrieval system