Takifugu flavidus (sansaifugu): 130539732
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Entry
130539732 CDS
T09160
Symbol
arid1b
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130539732 (arid1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfs03000
]
130539732 (arid1b)
03021 Transcription machinery [BR:
tfs03021
]
130539732 (arid1b)
03036 Chromosome and associated proteins [BR:
tfs03036
]
130539732 (arid1b)
Transcription factors [BR:
tfs03000
]
Eukaryotic type
Helix-turn-helix
ARID
130539732 (arid1b)
Transcription machinery [BR:
tfs03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
130539732 (arid1b)
Chromosome and associated proteins [BR:
tfs03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
130539732 (arid1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
NatA_aux_su
Motif
Other DBs
NCBI-GeneID:
130539732
NCBI-ProteinID:
XP_056914258
LinkDB
All DBs
Position
16:complement(10133598..10258147)
Genome browser
AA seq
2308 aa
AA seq
DB search
MAAQVASAPTRTNNKNKKLSSSLGPELSSGKSGGGGGGGGSVQRTGPMLSAGDGTLNNVD
HHRRSELNMVHSTSATHSAPDGRDKDGNNLTAAPASTNSTTSSMETGLIANHKLKCAGSG
DPPQSQPSPQQPQPSQFGQFAPQQQQQAPPQQQAQQRQLQSTNATSNNGQGPCGDRGMDH
QHHGGKENLLGGQGEPQQQHVSGKGEGDLTCKPAERMMGARYDHSNLGPTSNNSEFNNNY
YTPRPCYDQHGGQQQQGGGMGITHSSAHNSMENSHESGYHNSQYNQYPAYRAGYGGGAYG
MMGPSGCRQPGNMMMGSNSSNLSKSALGPPSGGFQRFPGQSGHQQHPSGATPTLNQLLTS
PSPMLRGYSAAYQDYSGTATQQQASMGLGKDAGPHFGASSAHGWGGQQRNHPHSMSPGNG
GQGLGRAQVSSMDFIAMKRSQLYGLANNPYSSPQQPGGGPYPPSQPYTSPPQHRYPMSMQ
GRSQMTMGGMQYPQQQVAPYGQQGMGGYSQQTGQQGPPTYFSPPQQTPQGPAQSPYLQPR
PPPQQEAQQDAYTARGHGPGNSGKANVEDGVSHDRPSSLPDLSGSIDDLPTGTEAGLGSA
VSAGGSSSRSSSSSQGEQGGAGNQGQSPFSPHASPHLSSQRSGPSPSPVGSPAGSTQSQQ
SRSGSGPISPANGPAGNTSAQGAATATQNSGNGPDGAHPPIPRSPMAQERGFMSNMQRNQ
AGSQFASPQSGPPVSPHHAPGGPVYPGMGPYSQSGPSGPYGPQGSQYGHQGNYHRPNYGG
TGSTSYSGSGITNNLGMNAGSPGLGQGSGQPIPVRRNHGPGSQNRGYPTMAPISPSMPHP
VGPGMGPPSLAASNRKPQELTVAANSTHSRRPPYARPSAQVGPLSPTSTHWPAAHTTHPT
MSPPPRPPHPSIPTPPSPSQIHRHGSYPGPGVSQPSTMATTVPYSQPTGNNSSDMGNGQA
PAYSMAPSGAVGASGDGTTSTDGKPKTDVKDDSGTTNEPHKPKLQDGYSSNSSGAPQQCT
SQPATPGGALPVPSPLSPSPASLSSYHGDDSDSISSPPWPPKTPSSPKTNPNSSGVSGER
ITRLFEFGMEPERRSWVERYLNFMEERGTPVTHLPAVGKKPLDLWKLYVAVREIGGLAMV
NKNKKWRELSTGLNLGTSSSSANSLKKQYIQFLFAYECKMERGEEPPADGSGGIAGGDSR
KQVKIQPPSPANSCGSLQGPQTPQSSGSSSTAEAAGDLKPPTPATTPLGQVTPLPPNRSS
VSVQDPFSEVSDPAFQKRGTPLPPSAPYQQGLSMPDMMMRMQYDTKDPFAGMRKMAGADP
YMPGQMQGGGMQDMYGRPPSAMSMSRSQYPYGPGYDRRPDHVMGMEGSMGPPGSQNNMGP
SNSESSMYPPSRYPSQQRNDGYSQQYPSMPYGMHPSGMYPQQQHGYKRPMDSMYGPPPKR
HESDMYGMQYSNQQPDMYNHYGSGYSAPEHRPLQGQFPFPYTRDHMTPTGQSQHGMMGGG
PTPNHASDGPNMWPSRTDLGYPYPNRQSQMPLYGSVGREDMDGRPRQEQWHRQPPYMSSS
GGMCALSSRQPSSYSNSQSMGNHLPRAPSPGAFQRSMDSRMSPSKALFMSPMKMPKPRMT
MMGSQAGGPLGHFPPNLRQDLNYPPGSVECTMPNLNPRRKLNSKDTGTPEAWRVMMSLKS
GLLAESTWALDTINILLYDDSTVASFNLSQLPGFLELIVEYFRRFLIEIFGILEEFEVRT
VAQKHPSGFDPNEVEKVSPDQEYASIIPPEAALAAETPVEPAGAVGEEPSPMATQPESAQ
VNGEKEEEASLKVEKEEEREGNKGEEGDRTESKTLSAEHGASKLEPKPKQASKYDKLPVK
IVQTEELIEDATERLGYITEFTTGLLHWQAGGGDSTSHIQTHFEAQSRAAARSEEKTEQE
SEEVDDGKDAPLKHIAATIDDVLCARVDALSYAHPARSLPSYPFRVHSDGERDHITLLED
EPRYLDEAPLCTASAWQDSLAKRCLCVSNIVRNLSFIPGNDLDISRHPALVLLLGKLLLL
HHQHPERNRTPPNLQRDEQRERGLSSSKEEWWWECLSVLRENAMVTLANISGQLDLSNYP
DTICLPILNGLLHWMVCPSAEAQDPFPSAAPHSQLTPQRLVLECLCKLSILGDNVDLLLA
TPPFSRQEKLFTILVRYVGQRKAQVYREMAVAVLSHLAQGDPTAARAIAMQKSCVGNLVG
FLEDGVSMAQYQQNPHSLLHMGHPPMDPPSINMMCRAAKGLLAMAKVEENKTEFVLFENR
LLDLSISSVLNPGVAAVICQVLFHLGKS
NT seq
6927 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcaagttgcatcggctccgaccagaactaacaacaaaaataagaaattatcc
agcagtttgggtccggagctcagttcggggaaatcgggaggaggaggaggaggaggaggg
agcgttcagcggactggaccgatgctgagtgctggagatgggactctgaataatgtagac
catcaccgccgaagcgagctcaacatggttcattcaacttcagcgactcacagcgctccg
gacggacgcgacaaggatgggaataacctcacggccgcgccagcttcgactaattcaacc
acttcctcgatggagacgggtttgatcgccaaccataagctgaaatgtgcggggagcgga
gatcccccacagtctcagccgtcgccgcagcagccgcagccgtcgcaattcggccagttt
gcgccgcagcagcagcagcaggcgccgccgcagcagcaggcgcagcagcggcagctccaa
agtaccaacgccaccagtaacaacggccagggaccgtgcggggacagagggatggaccac
caacaccacggtgggaaagagaacctgttgggggggcagggggagccacagcagcagcac
gtgtcaggaaaaggtgagggtgacctcacctgtaaacccgcggagaggatgatgggtgcc
aggtacgaccactccaacttggggccaactagcaacaactctgagtttaacaacaactat
tacaccccgaggccttgttacgaccaacatggcggacaacagcaacaaggcggtgggatg
ggtataacgcactcatcagcacacaacagcatggagaactcccacgaatcagggtaccac
aacagccagtataaccagtaccctgcgtatcgggcgggctacggcggaggggcctatggg
atgatgggcccctctggatgccggcaacctgggaacatgatgatgggcagcaactcctca
aacctgagcaagtctgccttggggcctccttccggtggtttccagaggttcccaggccaa
agtggtcatcagcagcatccttcgggggccaccccgacccttaaccaattgctcacgtcc
cccagtccgatgctgcggggttacagcgccgcgtaccaagactacagcggcaccgcgacg
cagcagcaggccagcatgggactggggaaagacgcggggccccacttcggggcctcgtcg
gcccacggctgggggggtcagcagaggaatcacccgcattcaatgagcccagggaacgga
gggcaaggcctcggcagagcgcaggtatcctccatggacttcatagcgatgaagcgctcc
cagctctacggcctggccaacaatccctactcctccccgcagcagcctgggggcgggcct
taccccccaagccagccgtacacctcgcctcctcagcacagatacccaatgagcatgcag
gggaggagccaaatgaccatgggtggcatgcagtatcctcagcagcaggtggcgccttac
ggccagcaggggatgggaggttacagccagcagacgggccagcagggaccgcctacgtac
ttcagccctccgcagcagacccctcaaggcccggcccagagcccctacctgcagccccgc
ccgccgccacagcaggaggcccagcaggacgcgtacactgcccggggtcatggcccaggg
aattctgggaaggccaacgtcgaggacggtgtctcccacgaccgcccctccagtttgcca
gacctgtccggctccattgatgacctccccacagggacggaggctgggctgggctcagct
gtcagcgcgggcggatcctccagcaggagcagcagcagcagccagggggagcaagggggt
gccggtaaccagggacagtcgcccttctctccacacgcttcgccccatctctccagccag
aggagcgggccgtctccctcccccgtgggatcgcctgcgggttccactcagtcacagcag
tcgcggtcaggatcggggcccatctctcctgccaacggacccgctggcaacacctccgca
cagggtgctgctacagccacacagaactctgggaatggaccagacggagcccaccccccc
atcccccgttcgcccatggctcaggagagagggttcatgtccaacatgcagaggaaccag
gccggatctcagtttgcttcgcctcagtcgggacctccagtgtctccccaccacgctcct
gggggcccagtgtatcctgggatgggtccctactcccagagcggcccgtctggcccttac
gggcctcaagggtcgcagtacgggcaccaaggtaattaccatcgacccaactacggtggg
actggcagtaccagctacagcggctccggcataaccaacaacctcggaatgaatgctggc
agccccgggctcggtcagggatctggtcaacctattcctgtaaggcgcaaccacggtcca
ggcagccagaacagagggtacccgaccatggctcccatctcccccagcatgcctcaccca
gtcgggcccggtatgggccccccttcgttagctgcttctaaccgcaaaccccaagaatta
acggtcgccgccaactcaacacacagcaggcgacctccgtacgcgaggccctcagcccag
gtggggccgctcagtcctacctccacgcactggcccgcagcccacaccactcatcccaca
atgtcacctccaccccgacctccccacccatccataccgactccaccttcaccttcacaa
atccatagacacgggagttatccaggaccaggcgtcagccagcccagcaccatggcgacc
accgttccctacagtcagccaacagggaacaacagctcagacatggggaacggccaagct
ccggcctacagtatggcaccgtcaggagccgtgggagcgtcaggagatgggacgacgagc
acagatgggaaaccaaaaacggatgtgaaagatgacagcggcactaccaacgaaccccac
aaaccaaagctacaggacggctacagcagcaacagcagcggcgccccgcagcagtgtaca
tcccagccagccacgccgggcggcgccctgcctgtgccctcccccctctcgcccagccca
gccagtctgtcctcttatcacggagacgacagcgacagcatcagcagccccccttggccc
cccaagaccccttccagtccaaaaaccaaccccaactcgtccggcgtcagtggggagcga
atcacgcggctgttcgagtttggcatggagccagaacggcggagctgggtggaacgatac
ctcaacttcatggaggagaggggcacacccgtcacccatctccccgctgtgggcaagaag
ccgctggacctctggaagctctacgtagccgttcgggagataggaggcctggccatggtc
aacaagaacaagaagtggcgcgagctgtccaccggcctcaacctgggcacgtcgagcagc
tccgccaactcgctcaagaagcagtacatccagtttctgttcgcttacgagtgcaagatg
gagaggggagaggagccgccggcggacggcagcggcggcatcgctggaggggacagcagg
aagcaggtcaagatccaaccgccgtcgcctgctaattcctgcggctccctacaaggccca
cagacgccacagtcctctggcagcagctccacagccgaggcggcgggggatctgaagccc
cccacccctgccaccacccctctggggcaagtcaccccactgccccccaacaggagcagt
gtgagtgtacaagaccccttctcagaggtgagcgacccggccttccagaagcgtggcacc
cccctgcccccctcagcaccttatcagcagggactcagtatgcctgacatgatgatgagg
atgcagtatgacaccaaagaccccttcgccgggatgaggaagatggcaggggcagatcct
tacatgccaggccagatgcaaggaggaggcatgcaggacatgtacggtcggccgccatcg
gccatgagtatgagccgctctcagtacccgtatggaccaggctatgacaggaggcccgat
cacgtcatggggatggaagggagtatggggcctcctgggagtcaaaacaacatgggtccc
tcgaacagcgagagcagcatgtacccccccagcagatacccttcacaacagagaaacgat
ggttacagtcagcagtatcccagcatgccgtatgggatgcatccatctggaatgtatccg
cagcaacagcacggctacaagcgtccaatggacagtatgtacggccccccacccaagaga
catgagagtgacatgtatggcatgcagtactccaatcaacagccagacatgtacaaccac
tacggcagcggctactcggctccagaacacagacccctccagggacagttcccctttccc
tacacacgtgaccatatgacccccacgggtcagagccaacacggtatgatgggcggcggt
cccaccccaaatcacgcgagcgacggtccaaatatgtggccgtccaggaccgacctcggc
tatccctaccccaacagacagtctcaaatgccgctgtacggctccgttggtagagaagac
atggacgggcggccgaggcaggagcagtggcaccgccagccgccctacatgtcgtcatca
ggcggcatgtgtgctctgtcttcacgtcagccgtcgtcttactccaactctcagtccatg
ggcaatcacttgcccagagcacccagcccaggggccttccagcgctccatggactccagg
atgtcacctagcaaagcgctgttcatgtcacccatgaagatgcccaaacccaggatgacc
atgatgggctcacaagccggtgggccgctcggtcattttcctcccaacctgaggcaggac
ctcaactaccctccaggatcggtggagtgcaccatgccaaatctcaatcccagacgaaag
ctaaactccaaggacactggaacgcctgaggcctggcgtgtgatgatgtctctgaagtct
ggcctgctggcagagagcacttgggctctagacaccatcaacatcctgctgtacgatgac
agcactgtggcctccttcaacctctctcagctgcccgggttcctcgagctgatcgtagaa
tacttccgacgttttctgattgagattttcggcatcctggaagagtttgaagtgaggact
gtggctcagaaacacccttcaggctttgatcctaacgaggtggagaaggtctccccggac
caggaatacgcgtccatcatcccgcctgaagccgcgttggcagcggagacaccggtggag
cctgcaggagctgttggggaggagccttccccgatggccacacagccagagtcggcacag
gtgaacggcgagaaggaggaggaggcgagtctcaaagtggagaaggaagaggaaagagaa
ggaaataaaggagaggagggcgacagaacagagagtaaaactctaagcgctgagcatggc
gccagtaagctcgaaccaaaacctaaacaggccagtaaatatgataagctccccgtcaag
atcgtgcaaacagaggagctgattgaggacgcgacggagcgcttagggtatatcacagag
ttcaccacggggctgctgcactggcaggcaggcgggggagactccacttcacacatccag
acccattttgaagcccagagccgagcagctgccaggtcggaggagaaaacggagcaggaa
agcgaagaggtggacgacgggaaggacgcgcctctgaagcacatcgccgctaccatagac
gacgttctctgtgcgcgcgtcgacgccttgtcgtacgcccaccccgcacgctccctgcca
tcctaccccttcagggtgcattcggatggcgagcgggaccacatcaccctgctggaggac
gagcctcggtacctggatgaggccccgctttgcaccgcctctgcctggcaggactccctg
gccaagcggtgtctctgcgtttccaacatcgttcgcaacctgtcttttattcccgggaac
gacttggatatttcgcgccaccctgctctggtcctcctcttgggcaagctgctcctgctg
caccaccagcacccggagaggaacagaacgccccccaacctccagcgggatgagcagcga
gagcgaggactgtcgagcagcaaagaggaatggtggtgggagtgtctgagcgtgctaagg
gagaacgccatggtcacgctggccaacatttcgggccagctggatctctccaactatccg
gacactatctgcctccccatcctcaatggccttctccactggatggtgtgcccttcagcg
gaggcccaggaccccttcccttcagcagcgccgcactcccagctcactccccagagactt
gtgctcgagtgcctctgcaagctcagcatcctgggcgacaacgtcgaccttttgctcgcg
acgccgcctttcagccgacaggagaagctcttcaccatcttggtccgctacgttggtcag
aggaaggcccaggtgtacagagagatggccgtggccgttctctcgcacctggcccaagga
gaccccacagctgcacgcgccatcgccatgcagaagagctgcgtggggaatttggttggt
ttcttggaggacggcgtgagcatggcgcagtaccagcagaaccctcacagcctattacac
atggggcatccccccatggacccacccagcataaatatgatgtgcagggcagctaaaggc
ctgttggctatggctaaagtggaggaaaacaagacagagtttgtgttattcgagaacaga
ttgttagacctctcaatttcatcggtgcttaacccgggagtggcggctgttatttgccaa
gtcctcttccatttaggaaaatcatga
DBGET
integrated database retrieval system
