Takifugu flavidus (sansaifugu): 130539804
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Entry
130539804 CDS
T09160
Symbol
rbm25a
Name
(RefSeq) RNA-binding protein 25 isoform X1
KO
K12822
RNA-binding protein 25
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130539804 (rbm25a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tfs03041
]
130539804 (rbm25a)
Spliceosome [BR:
tfs03041
]
Complex A
U1 snRNP components
U1 related factors
130539804 (rbm25a)
Complex B
130539804 (rbm25a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
130539804
NCBI-ProteinID:
XP_056914395
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All DBs
Position
16:complement(13849247..13857166)
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AA seq
862 aa
AA seq
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MSYPPPINRQQLGIPQLPPRIPPPQFAGFAPPVPPGTPMIPVHMGIMAPAVLDPAALAAA
QKPMIQKRESGPVRVKDPEENAGPTTTVFVGNISEKASDMLVRQLLAKCGIVLSWKRVQG
ASGKLQAFGFCEYKEPDSTLRALRLLHELLLGDKKLLVKVDAKTKAQLDEWKAKKRGANG
ETSGTNSNQEDEEEVLDEETLRKDQGVKGSIEVLIREYANELNAPSQDPDSQPRNKKRKE
KKEEVWSRCSTSAGNDRPRPMLSAPRLPQEDISAMEIEEDKRDLISREISKFRDTHKKLE
EEKGKKEKERLELERERRERDKERERERERRDREKEKEREKERDKERERERDREREKTKE
RERERERERSRDIREDRSRSKSVGLLGNSGEFLLIRISNRDLCRERAREDKKRDRDEDEE
DVYERRRLERRLRDKEAAYQERLKNWEIRERKKFRDYSKDAEREDERRRETMKEAKRLKE
FLEDYDDERDDPKFYRGSALQKRVRDREKEAESDERDRKREKEELEEIRQRLLAEGHPDP
DAELQRLEEEAERRRQAPLKLEPEDRKQKPHKDRAPKRREAERPAEPVPLVPQKLSDDDD
NEELEEDAYRNGEDSQEDKPQPKPVMRPITAAPSVSSASGNVTPNSPANDSPCGIIIPGE
GTPDLQPLEENRPKIGLSLKLGTSSSPCQLTAGKRKKLTAVESVFNKFDDEEIDEPQRKR
KLVPLDYGDNDKSLGLDGAELSGSKNSTNTEEKRKHIKSLIEKIPTARPELFSYPLDWTM
VDSTLMDRRIRPWINKKIIEYIGEEEATLVDFVCSKVMAHSTPQGILDDVAMVLDEEAEV
FVVKMWRLLIYETEAKKIGLVK
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatcctcctcccatcaaccgccagcagctcggcatccctcagctgcctcccaga
atcccccctcctcagtttgcgggctttgccccacctgttcccccaggtacccccatgatc
cccgttcacatgggcataatggcccccgcagttctggacccggcggcactcgccgcagct
cagaagccgatgattcagaagagagagtctgggcccgtccgggtgaaggacccggaggag
aacgctggacccaccaccacggtctttgtggggaacatctctgaaaaggcatctgacatg
ttggtcagacaactgctggccaaatgcggcatcgttctgagctggaaacgggtccaggga
gcctctggtaaacttcaagcttttgggttctgtgagtataaggagcccgactccacgctg
cgagccctcagactcctgcacgagctgctcttaggtgataaaaagttgttggtcaaggtg
gatgcaaagaccaaggctcagctggatgagtggaaggccaagaagaggggagcaaacggg
gaaaccagtgggacaaacagcaaccaggaggacgaagaggaggtcctggatgaggaaacc
ctgcgtaaggaccagggcgtgaaggggtcaatagaagtgctgatccgagaatatgcgaac
gaactcaacgccccctcgcaagaccccgacagtcaaccccgcaacaagaagaggaaagag
aagaaagaggaggtatggtccagatgctccacatctgctggaaatgaccggccacgccca
atgctcagtgctcctcgtctcccccaggaggacatcagcgccatggagatcgaggaagac
aagagagacttgatatccagagagatcagtaaattccgcgacacacacaagaaactggaa
gaagaaaaaggaaagaaggaaaaggagcggctggagctggagagggaaaggagagagagg
gacaaagagcgggagcgagagagggagcgccgcgaccgggagaaggaaaaagagagggag
aaagagagggacaaggagcgcgaaagagagcgagaccgcgaacgtgagaagaccaaggag
cgggagagggagcgtgagcgggagcggagccgagacatcagagaagatcggagcaggtca
aagtcagtgggactgctcggaaattcaggtgaatttctcctgatccgcatcagtaacagg
gatttgtgcagggagcgggctcgagaagataagaaacgagaccgagacgaagacgaggag
gatgtgtacgagcggaggaggctggagaggaggctccgagacaaagaggcagcctaccag
gaacggctcaaaaactgggagatccgggagaggaagaagttccgtgactacagcaaagat
gcagagagggaggacgagcggcggcgtgaaacgatgaaagaagccaaaagactgaaggaa
ttccttgaagattatgacgatgaaagagacgatccaaaattctacaggggaagcgctctg
cagaagcgagtccgtgaccgggaaaaggaggccgagtcggacgagcgagaccgcaagagg
gagaaagaggagctggaggagatccgacagagacttctggccgagggccacccggacccc
gatgctgagctgcagagattggaggaggaggcagagcgcagacgacaggctcctctgaaa
ctggaacctgaggacagaaaacagaagcctcacaaggatcgggctccgaagaggagggag
gcagaaagacccgcagagccggtgccgctggtaccgcagaaactctcagatgacgacgat
aacgaggagctggaagaagacgcctatcgcaatggcgaggactcgcaggaggacaagccc
cagcccaagcctgtgatgcggcccatcactgctgcgccctccgtctcctctgccagcggg
aacgtgacgccaaactctcccgccaacgactctccgtgtggcatcatcataccaggagag
ggcactcctgacctgcagcctctggaggagaaccggcccaagattggtctcagcctcaaa
ctgggcacctccagcagcccctgccagctcactgctgggaagaggaagaagctaaccgcg
gtggaaagtgtttttaacaaatttgatgatgaagaaattgatgagccgcagcgcaaaagg
aagctggttcccctggactacggcgacaacgacaagagtctgggactggatggagcagaa
ctgtccggctctaaaaatagcaccaacacggaggagaagcgcaaacacataaagagcctg
attgaaaagatcccgacagccagaccggagctcttctcctaccctctggactggaccatg
gtggactcgaccttgatggatcgacgcatacggccgtggatcaacaagaaaattatagaa
tacatcggagaggaggaggccacactagttgattttgtttgttcaaaggtgatggcacac
agcactcctcaggggattcttgacgatgttgctatggttcttgatgaagaagccgaagtc
ttcgtagtaaaaatgtggcggctgttaatatacgaaacggaggcaaagaagattggactg
gtgaaatag
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