Takifugu flavidus (sansaifugu): 130539806
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Entry
130539806 CDS
T09160
Symbol
smoc1
Name
(RefSeq) SPARC-related modular calcium-binding protein 1 isoform X1
KO
K24354
SPARC-related modular calcium-binding protein
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tfs00536
]
130539806 (smoc1)
Glycosaminoglycan binding proteins [BR:
tfs00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
130539806 (smoc1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Thyroglobulin_1
Thyroglob_assoc
SPARC_Ca_bdg
Kazal_2
EF-hand_7
Kazal_1
EF-hand_1
CFAI_KAZAL
EF-hand_6
Spem1
UDPGP
Motif
Other DBs
NCBI-GeneID:
130539806
NCBI-ProteinID:
XP_056914401
LinkDB
All DBs
Position
16:complement(13808984..13828132)
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AA seq
508 aa
AA seq
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MKSADMLRTSQPPREMLSSALLFFTFSHFLAAPFLSFLPHVSAQKSPSRWLIGDRDSHCG
VICTRTQVKPVCGSDGRSYESACELQRARCRDKTLTLVPRSLCRGRNWVKIDQLPAAPAP
TSASEVRDPEVKDAGGQSKCRADRSQALDQARRPQESTFVPECNEDGTFAQVQCHTPTGY
CWCVTSDGKPVSGSSVHNRTPVCSGSVTEKPPGPSNSGRKVVSFIFFLTLNPDDGSRPPP
TMETHVAVEGDEITGPTLWNKQQENKQNSSSSRKQEKVPSCDQERQSALEEARQNSRQAS
FIPDCGPGGLYKAVQCHQSTGYCWCVLVDTGRPIPGTSTRYQTPECDAAARSQLSGLEDP
FQGRDLPGCPEGKKLEFITSLLDALTTDMVHAINSPAPSGGGRFAEPDPSHTLEERVVHW
YFAQLDNNSSHDINKKELKPLKRYLKKKAKPKKCARKFIDYCDLNKDRTISLQELKGCLG
VSKEGSSTTSGTHRTSRSSSVRREGSRS
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtgccgacatgctcagaacttctcagcccccccgagagatgttgtcgtcagcg
ttgctcttcttcaccttctcccacttcttggcggctccgtttctctcttttctgcctcac
gtctccgcgcagaagtctccatctcggtggctgatcggagacagagacagtcactgtggg
gtcatctgcacacggacgcaggtgaagccggtgtgcggctcggatgggcggagctacgag
agcgcctgcgagctgcagagggcgcgctgcagagacaaaaccctgacgctggtgccccgc
agcctctgcagaggtagaaactgggtgaaaatcgaccagttgccggcggctccggcgcca
acgtcggcgtcagaagtcagagacccggaggtgaaagatgcaggaggccagtccaagtgc
cgtgctgataggagccaggctctggaccaagcaaggagacctcaggagtccacgtttgtg
ccagaatgcaacgaggacgggacatttgcccaggtgcagtgtcacaccccgacaggttac
tgctggtgcgtcaccagtgatggcaaaccggtgagcggctcctccgtgcacaacaggacc
ccggtgtgttcaggctcagtcactgaaaaacctcctgggccgtccaactctggtcgaaaa
gtcgtctccttcattttctttctcaccctcaacccagacgatggctcccggccccccccc
accatggagacccacgtcgctgtggagggtgatgaaatcacggggccgaccttatggaac
aaacaacaggagaacaaacaaaacagctccagctccagaaaacaagagaaggttccctct
tgtgaccaggagcgacagagcgcgctggaggaagctcggcagaattctcgtcaggcttct
ttcatccccgactgtggacccggaggactttataaggcggtccagtgccaccagtccaca
ggctactgctggtgtgttctggtggacacaggacggcccatccctggaacctccaccagg
taccagacgccggagtgtgacgccgctgcacgttctcagctctcaggcctagaagatccg
ttccaaggccgagacctgccaggctgcccagaagggaagaaactggaattcattacaagc
ttgttagacgccctcaccacagacatggtgcacgctataaactcaccggccccctctggt
ggtgggaggtttgctgaaccggaccccagtcacactctggaggaacgggtggtgcactgg
tactttgcccagctggataacaacagcagccacgacataaacaagaaggagctcaagccc
ttgaagagatacctgaagaagaaagccaaacccaagaaatgtgcccgcaagttcatcgac
tactgtgacctgaacaaggacaggaccatctccctgcaggagctgaagggctgcctgggt
gtcagcaaggagggaagctcaacaacaagtgggacccacaggacaagcaggtcgtccagt
gtgagaagggaaggatcccgaagctaa
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