Takifugu flavidus (sansaifugu): 130540169
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Entry
130540169 CDS
T09160
Symbol
rpap1
Name
(RefSeq) RNA polymerase II-associated protein 1
KO
K20826
RNA polymerase II-associated protein 1
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tfs03021
]
130540169 (rpap1)
Transcription machinery [BR:
tfs03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
130540169 (rpap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP1_C
RPAP1_N
Motif
Other DBs
NCBI-GeneID:
130540169
NCBI-ProteinID:
XP_056915116
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All DBs
Position
16:7813039..7824448
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AA seq
1403 aa
AA seq
DB search
MLRRPQPADSEEDLLREQQQFLTSGAPAAATVVRRPDKRRGEEGGGVKGKDDAQDRDVVT
IEDLPDQLPSLTPAPPKKSRFKANRVTFEDEDVEERLDRHDSHISAVLSKIVERDTSCTP
ISLPALTGMPFPKVLHRSETDCQGPHSLSRGKKSIFARQIAAQRLKEGAASVCTPETVQM
CDSSMETDQCRAADDRPRLVSGQGLVDPDSTGETQRIHRENQAKLQGMSQSEILDEQKKL
LSQLDPRLVKFIRSQKAQSVPSSTSPSELPRGGSSRENIPLENVSKQSDSLSAAPEPQEV
TMEGEGEEEGVPRPPAVMEEVLPVRPQKEWVHMDKVEPEKLEWMRDLPAPRKKGTKKAMQ
ARFNFAGTLIPPNEDLPTHLGLHHHGEEPERAGYSLQELFMLSRSQFNQQRMLALSTLAN
ILSKARAEGYTSVLKGSVLSVLLDAGLLFLLRFALDDSVEGVMSAAVHALRAFLVCAEDE
ECLDSTFSWFRGLASFPLLPSAQDDEDEEDEGVPENIRESAKEREARKSDYDVARQDVVK
GLLKMKLLPRLRYILEVVRPSPRVVQDVLEILTRIARHSSSSATQVLDCPRLMETLLSEF
FPTSWTAPSLTPRQSAYGLPLASAMKLLRVVATSGRHACARLLNSFGVTERLSHVLSIEP
SELLLEESEAVRITAEAYRLWAVAAGYGQACKLFIELYPSLAKSLQSVHRVLDSSNPLLP
LQIQRVQALLSLLTQVTNTAGCHQELQTSMVSSQGHECPPPPPVSWGHITGLQPSLLGHL
KGFVKNLDNPLQKESSLAVIPTYLAYLHAYYQQLSKQSCFKPVETLQELELLTSDVLRPL
ISHHAVQALIKNLKSSSVVCNAQSSHVSHETIPSLPGLACHGWRDHPGLVASSSPFPLLT
GLGFLLDTIMDIHKGLCCKFADLLLSEPVTGYLRSCSQATPTLVLGRAWLLRHEHYLLYL
LLRLAHRLVPVEPQIAKHASLYHQVALVLLPWLLPGSESMAHELFSTIVFSKDFISEGHS
GGPEAVELGELKLQEQTEHTSPSLQTVGALLRDACVQLPSIQGCFLTHLAHLEPSVLTSR
DALLGRSPWVKSHLLPELTGPILPSDWPFLPLVSLYEQTGVSGSGGLEVEALPQGALQSV
THCLQWLLVLEVWREEALKVVPPVAKLARLSCVFLCSSDLFLERPVQKLTWGLFRLLTRQ
SRLDSLDLNVPPPGLASFQDLYLALLTQYEAVSFGDRLFGCWLLLPLQRRYSATMKLAVF
GEHVGMLRSLGVTIEQLSIPIERFTSPAEDSLPLLRLYFRSLVTGTLAPRRCPVLYVVAL
SHVNAFIFSQDAAAQEVETARRSMLRKIYSLTDEVLKTHLLLFRLPQRHSEFGFDVYDQL
PPIRAKRLENILQTQESSSDQRD
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atgttgcggcgcccccagccagcagactctgaggaagacctcctaagagagcagcagcag
tttctgacctctggtgccccggctgcagccacagtggtccggagacccgacaagaggaga
ggggaggaaggtggaggagtaaaggggaaggatgatgcacaagacagggatgttgtcacc
attgaggatcttcccgaccaactgccgtctttaacaccagcccccccgaagaagtctcgt
tttaaagccaaccgcgtcacctttgaggatgaggatgtggaggagaggctggacagacat
gacagtcacatcagcgcagttctgtctaagatcgttgaaagagacaccagttgtacaccg
atatctctaccagcactgaccggaatgcccttccctaaagtactgcaccgttctgaaact
gactgtcaggggccacattctttgtccagagggaagaagagtatctttgcacgtcagatt
gcagctcagagacttaaggagggagcagcgtctgtgtgcacccctgaaactgtccagatg
tgcgacagcagcatggaaacagatcagtgtcgtgctgcggatgaccgaccaaggttggtg
tctggacaggggcttgtggaccctgatagtacaggagagacccagaggatccacagagag
aaccaggccaagctccagggaatgtcccagtctgagattctagatgagcagaagaagcta
ctgtctcagcttgatccaaggctggtgaagtttattagatctcaaaaggctcagagtgtc
ccatcctctacctccccctccgaactgccccggggcggaagcagccgggaaaacattcct
ctcgaaaacgtgagcaaacagtcagactccctcagtgctgctccggagcctcaagaagtg
acgatggaaggggagggggaagaagaaggggtgccacggccacctgctgtgatggaggag
gttctgccggtgaggcctcagaaggagtgggtacacatggataaggtggagccagagaag
ctggagtggatgagagatttaccagcgcccagaaaaaagggaaccaagaaggcaatgcaa
gctcggtttaatttcgcaggaactctgataccccctaatgaggatctgcccacccactta
ggcctgcaccatcacggagaggagcctgagcgtgcaggttattccctgcaggaactcttc
atgctgtctcgcagtcagttcaaccagcagaggatgttggccctcagcactctggccaac
atcctgtcaaaggcacgtgcagagggttacacctctgttctgaaaggcagcgttctgtcc
gtgctgctggacgcaggcctgctcttcctgctgcgctttgcccttgacgacagcgtggag
ggggtgatgtccgcagcggtgcatgctctcagggcctttcttgtgtgtgcggaggatgaa
gagtgtttggacagcaccttctcctggtttcggggtctggcgtccttccctctgctaccc
tctgctcaggatgatgaagatgaggaggatgagggggtgccggaaaatataagggagagc
gcaaaggagagggaagcgaggaagagcgattatgatgtggccaggcaggatgttgtgaag
ggcttgctgaagatgaaactgctccccaggctacgttacatcctggaggtggtccggcct
tctcctcgagttgtccaggacgttctggagatcctgactcgtattgcgaggcactcctcc
tcatctgccactcaggttctagattgtcctcgtttaatggagacgttgttgtcagagttc
tttccgacttcctggactgcaccatctctgactccccgccagtctgcctatggactccct
ctggccagcgccatgaagctgttgagagtggtggcgacctctggcagacacgcctgtgcc
agactgttaaactcttttggagtgactgagcgtctgtctcatgtgttgagcatcgagccc
agcgagctgctcctggaggagtcggaggccgtcaggatcactgctgaggcctacaggctg
tgggctgtagcagctggatatgggcaggcctgcaaattattcatagaactgtatcccagc
ttagccaagtccttgcagtcagttcacagggtcctggactcctcaaaccctctgctgccc
ctgcagatccagcgggttcaggctctcctttctctgctcacccaggtcacaaacactgcc
ggctgccaccaggagctgcagaccagcatggtcagctcacagggtcacgagtgcccccca
cccccacccgtgtcctggggtcacatcactgggttgcagccatcactgttggggcatttg
aaaggttttgtgaagaatcttgataatccgcttcagaaagaaagcagcctggcggtcatc
ccgacctacctggcctacttacatgcttactaccaacagctgtccaaacagagctgtttt
aagccagtagagacactgcaggaactagaactgctgacatctgacgttctccgtcctctg
atctcccatcatgctgttcaagctctgatcaagaacctaaaatcatcgtcagttgtgtgt
aacgcccagtcatcccatgtgagccatgaaaccatccccagcctgcctggtttggcctgt
catggatggagggatcatccagggctggttgcttccagctctccctttccgctcctcaca
ggacttggctttctactagatacaatcatggacatccataaaggactatgctgcaagttc
gctgatctcctgctgtcagaacccgtgaccggttacctgcgcagttgcagtcaggccacg
ccgaccctggttctcggccgagcctggctcctccgtcacgagcactatcttctctacctg
ctgcttcggctggcgcacagattagttccagtcgaaccacaaatagccaagcacgcctcg
ttgtatcaccaggtggcgctggttttgttaccgtggttattgcctggcagtgaatccatg
gcacatgagctgttttccaccatcgtcttcagcaaggattttatatcggagggacacagt
ggtgggcctgaggctgtagagctgggggaactcaaacttcaggagcaaacagagcacacg
tctccttctctccagacagtgggagctctgttgcgtgacgcgtgcgtccagcttccgtcc
atacaaggatgcttcctcactcacctggctcatttggagccatccgtgctgacgtcccgg
gacgctctgctgggccgcagcccatgggtcaaatcccacctcctccctgagctcaccggc
cccatcctgccatctgactggcctttcctcccactggtgagcctctacgagcagacgggc
gtgtctggcagtggaggcttggaagtggaggcgcttccgcagggcgcactgcagtctgtg
acccactgtctgcagtggctgctggtgctggaggtctggagagaggaggcactaaaggtg
gtcccgcctgtcgccaagctcgcccgcctgtcctgtgtgttcctgtgttccagtgacttg
tttcttgagaggcctgtccagaaactgacctggggcttgttccgacttctcaccaggcag
tccaggctagactctttggaccttaatgttcctcctccaggcctggcctcgtttcaggac
ttgtacctcgcgctcctgacccagtacgaagccgtgtctttcggagaccggctgtttggc
tgctggctccttctgccgctgcagaggcgttacagcgccaccatgaagctggctgtgttc
ggagagcacgtggggatgctgaggtcactgggggtcacgattgaacagctctccatccca
atcgaacggttcacctctcctgctgaggactccctccctttactccgcctctactttcgt
tctttagtaacggggacgctggcacctcgccggtgtccggtgctgtacgtggtcgccttg
tctcacgtcaacgccttcatattctctcaggatgctgcagcccaggaagttgaaacggct
cgacggagtatgctgaggaaaatctactccctgactgatgaggtgttgaaaacccacctg
ctgctcttccgtctgccacagcggcactcggagtttggcttcgatgtgtacgaccagctg
cctcccatcagggccaaacggctggagaacatcctccaaacgcaggaaagctccagtgac
caaagagactga
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