Takifugu flavidus (sansaifugu): 130540191
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Entry
130540191 CDS
T09160
Symbol
hif1aa
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha a
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04137
Mitophagy - animal
tfs04140
Autophagy - animal
tfs04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130540191 (hif1aa)
04137 Mitophagy - animal
130540191 (hif1aa)
04148 Efferocytosis
130540191 (hif1aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfs03000
]
130540191 (hif1aa)
Transcription factors [BR:
tfs03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
130540191 (hif1aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
SKI
Motif
Other DBs
NCBI-GeneID:
130540191
NCBI-ProteinID:
XP_056915151
LinkDB
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Position
16:complement(8008969..8019152)
Genome browser
AA seq
755 aa
AA seq
DB search
MDTGIAPEKKRVSSERRKEKSRDAARCRRGKESEVFYQLAQELPLAHSISSSLDKASIMR
LTISYLRMRNLLNAGEPITGEETDLDLQLNGSYLKALDGFLMVLSEDGDMIYLSENISKC
LGLAQFDLTGHSVFDFIHPCDQEELREMLIHRTGSKKAKEPNTERSFFLRMKCTLTSRGR
TVNVKSATWKVLHCSGHVRVYENHTEPSPDEQKESAVPYLVLICDPIPHPANIEFPLDTK
TFLSRHTMDMKFTDCDERITELMGYEPEDLLNRSVYEYYHAQDSDHLAKTHHNLFAKGQV
CTGQYRMLAKRGGFVWLETQATVIYNTKNSQPQCVVCVNFVLSGIQEEKMVLSLEQTADV
KPVKEELLQEEEEKKFIIESSSPDISEPLLKEEEKNPELDVMEMLTEVTESQPVCSLYDK
LKEKPEALTLLAPAAGDTIISLDFSCPEMQLLKEVPLYNDVMLPSTSEKLVLPLSPLPPS
EPLHVAPTTPDDTKGKRCILDSSATPASSSVVDSPHDLCFCMDSDMSSDFKLDLVEKLFT
IDTEPKTPFTTQAMEDLDLEMLAPYISMDDDFQLRSLSPDEALPSGPGNPLQSTSVCLTP
EIPSYPGSPFSLPDSCTASPAPPEPLSTPHLATILAKRTTQLNKEVELRTLAAQNTPRKR
KLADVKDTIEQGVLHMGQIEQGKKLKASDMGTTRTILLLPTDLATRLLGTTSEDTSSLFS
LPQLTRDDCEVNAPLQGRQFLLQGEELLRALDHVN
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggacacgggaattgcaccagaaaagaaaagggtgagttcagagcggagaaaggagaag
tcgagagatgccgcgcgatgtcggcgcggcaaggagtcggaggtgttctaccagctggct
caggaactgcccctggcccacagcatcagctccagtctggacaaggcctccataatgaga
ctcaccatcagctacctgcgcatgaggaaccttctgaacgctggtgagcccataacaggg
gaggaaacggacctggacctgcagctaaatggttcctatctgaaggctctggatggcttt
ctgatggtgctatctgaagatggagacatgatctatctctctgagaacatcagcaagtgc
ctcgggctggcacagtttgatctgactggccacagcgtgtttgacttcatccatccctgc
gaccaggaggaactgagggagatgttgatccatagaacaggctccaaaaaggccaaggag
ccaaacacggaaagaagctttttccttcgcatgaaatgcaccctgacgagcagaggtcgc
accgtcaacgttaaatccgctacatggaaggtgctgcactgctcaggacatgtgcgtgta
tatgagaaccacactgagcccagtcctgatgagcaaaaggagtcggcggtcccatacctg
gttttgatctgtgaccccatccctcaccccgccaacattgagttccctctggacaccaag
accttcctcagccgtcatacaatggacatgaagttcacagattgtgatgagaggattact
gagctcatgggttatgagccagaggacctgctgaatcgttcagtttatgagtattaccat
gctcaggactcggatcatctcgccaagactcaccacaacttgtttgcaaagggccaggtc
tgcacaggtcagtaccgaatgttggccaagagaggcggcttcgtgtggttggaaactcaa
gcaaccgtcatctataacaccaagaactcccagccgcagtgtgtcgtctgtgtcaacttt
gtgctcagcggcattcaggaggagaagatggtcctgtctctggagcagactgcagacgtg
aagcctgtgaaggaggagctgctgcaggaggaggaagagaaaaagttcatcatcgagagc
agctcccctgacatttctgagcctctgctgaaggaggaagagaaaaacccagagttggac
gtcatggaaatgttgactgaggtgacggaaagccagccagtgtgcagcctgtacgacaag
ctgaaggagaagcccgaggccctcaccctgctggcccccgctgctggagacacaatcatt
tcgctggacttcagctgccccgagatgcagctgctgaaggaagttcctctctacaacgat
gtgatgctcccatctacgagcgaaaagctggttctgcctctgtctcctctgccgcccagc
gagcctctccatgtcgcgcccaccacccccgacgatacaaaagggaagcgctgcatcctc
gactcttctgctacgcctgccagctcctcagtggtcgatagtccacatgatctctgtttc
tgcatggactcggatatgagctcagacttcaaactggacttggtggagaagcttttcacc
attgatacggagcccaagacccccttcaccacacaggcaatggaagacttggatctggag
atgttggctccctacatctccatggatgacgacttccagctgcgcagtctctccccggat
gaggctctaccttctggaccaggaaacccgctgcaaagcacctctgtctgcctgacacca
gaaatccccagctatcccggttcccccttcagcttaccagacagctgcacagcttcccca
gcaccccctgaaccactgagcacccctcaccttgctaccatacttgctaagaggaccaca
cagctgaacaaagaggtcgaactcaggacgctggcagctcagaacaccccacgcaaaaga
aaactggctgacgtgaaagacacgatcgaacagggagttctgcacatggggcaaatcgag
cagggcaaaaagctgaaggcctccgacatgggaacaaccaggaccatacttctgctgccc
acagacttggccactcgtttgctgggcaccacgtcagaagacaccagttcactcttcagc
ttaccacagctcacccgcgacgactgcgaggtcaacgcccccctacagggccgtcagttc
ttgctgcagggggaggagttgctgcgagcgctggaccacgtcaactga
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integrated database retrieval system
