Thalassotalea fonticola: RI844_00295
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Entry
RI844_00295 CDS
T10167
Name
(GenBank) AlkA N-terminal domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
tft Thalassotalea fonticola
Pathway
tft03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tft00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RI844_00295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tft03000
]
RI844_00295
03400 DNA repair and recombination proteins [BR:
tft03400
]
RI844_00295
Enzymes [BR:
tft01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
RI844_00295
Transcription factors [BR:
tft03000
]
Prokaryotic type
Helix-turn-helix
AraC family
RI844_00295
DNA repair and recombination proteins [BR:
tft03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RI844_00295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
HTH_Mga
HTH_Tnp_1
Motif
Other DBs
NCBI-ProteinID:
WOH37717
LinkDB
All DBs
Position
complement(57389..58870)
Genome browser
AA seq
493 aa
AA seq
DB search
MKLDPHVCMQARLSRDSRFDGKFYTAVITTGIYCRPTCPAGPAHEKNVSYYQSAAQAEFN
GYQPCKRCKPELSPNQPLPKTIDQALALVTIEPQIHVADLATKLDLSERQLQRLFNDNLG
VSPQIFINQKRQINARKLLISSTIAFADVALISGFGSLRSFNDHIKHQYKLTPSQLRKSS
KQEKVSHLQLKLAYNGELNWPLMLSFFKARQIPGVEAVTDRYSRTINIDSCTGWIAVSKP
DAGNYLAVDVWVNDFSKLAEIVTRIRKMFDLDCNIDLIRTQLAKHPTLKPIIENYPGLRL
PGCWDIFEFSIRAILGQQISVKAATTLAGRIAQKFTKPIVEENAEAAYPHGLSILFPKAE
MLASAGFDDIGITNTRQQTLHTWIKFFIANKPLFDNPRDTESFEKTLCELKGIGPWTANY
MAMRGLSLPDAFPAADLGLIKALSNNSELREQLKLEDDKPLTGKQILAIAESWRPWRAYA
AIYLWQSLSAKNN
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgaaattagatccgcacgtttgcatgcaagcaaggctgtctcgtgactcacgatttgat
ggtaaattttatactgcggtcatcactactggaatttattgccgtcctacttgcccggca
ggtcctgctcatgaaaaaaatgttagctattaccaaagcgcggcacaagctgaatttaat
ggttatcaaccatgtaagcgctgtaaaccagaattatctccgaaccagccattaccgaaa
acgatagatcaagcgttagcattggttaccatagagccgcaaatacatgtagccgaccta
gcaactaaactcgacttaagtgaacgccagttgcaacgcttatttaacgataatttaggt
gtgtcaccgcaaatatttattaatcaaaagcgacaaattaatgcccgaaaattattgatt
agttcaacaatagcatttgctgatgttgcattaattagcggttttggtagcttgcgaagc
tttaatgatcatattaaacatcaatataaattaacccctagccaacttaggaaaagcagc
aaacaagaaaaagtaagtcatttacaacttaagttagcatacaatggcgaactcaattgg
ccattaatgctgagtttttttaaagctcgacaaataccaggggtagaagcggtaacggat
agatacagtcgtacaataaatatcgatagctgtactggctggatagccgtgagtaaaccc
gatgcgggtaattacttagctgttgatgtctgggtaaatgatttttcaaaactagctgag
atcgttacccgtatacggaaaatgtttgatcttgattgcaatattgacttaattagaacg
caacttgccaagcatccaaccttaaagccaattattgagaactacccaggattaagactt
cctggttgctgggatatatttgagttttcaataagagcgattttaggtcagcaaatatcg
gtaaaagccgcaacgaccttggctggtagaattgctcaaaaattcactaaaccaatagta
gaggagaatgccgaagcggcttaccctcatggtttgtcgatactatttcccaaagctgaa
atgttagcttctgctggttttgatgacatcggaattacaaacaccagacaacaaactttg
catacttggattaagtttttcattgccaataagccattatttgataacccaagagatact
gagagttttgaaaaaacgctgtgtgaattaaaagggattggcccatggactgccaattac
atggcgatgcgcggtttaagcctacctgatgcgtttcctgccgctgatctaggcttaatt
aaagcattgtcgaataattcagaattgcgagagcagttaaaacttgaagatgacaaaccg
cttaccggtaaacaaatattagccatagctgaatcatggcgaccttggcgagcatacgca
gccatttacttatggcaatcattgtcagctaaaaataactaa
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