Thalassotalea fonticola: RI844_01420
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Entry
RI844_01420 CDS
T10167
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tft Thalassotalea fonticola
Brite
KEGG Orthology (KO) [BR:
tft00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tft03016
]
RI844_01420 (truB)
Enzymes [BR:
tft01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RI844_01420 (truB)
Transfer RNA biogenesis [BR:
tft03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RI844_01420 (truB)
Prokaryotic type
RI844_01420 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
DUF515
Motif
Other DBs
NCBI-ProteinID:
WOH37922
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All DBs
Position
335770..336723
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AA seq
317 aa
AA seq
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MGKRRKGRQIDGVLLLDKPYEMSSNSALQAAKRIYFANKAGHTGALDPLATGMLPICFGE
GTKFSQFLLDIDKTYIVTAKLGIRTTTSDADGEIVAEKPVNITETELLPALESFRGETKQ
VPSMYSALKHKGQPLYKYAREGITIEREARDITVFRLDLLRFEGDEVDLEIHVSKGTYIR
TIIDDLGELLGCGAHVSMLRRTAVGNYPVDKMVTMEQLETLLNDAKEQNISPSEVLDKLL
LPMDTAVYILDSVTIDAESARYLRFGNPVMITNAPATDTLLKVYVGEEQEFIGVGIINDD
GMLAPKRIVVDHQKTDS
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagcgcagaaaaggccgtcaaatagacggtgttttgttacttgataagccttat
gaaatgtcttcaaattcagcgctgcaagccgcaaaacgtatttattttgccaataaagca
ggacatactggtgcactagatccattggctacggggatgctgccaatctgttttggagaa
ggtaccaagttttctcaatttctattagatattgataaaacctatatcgttactgctaaa
ctaggtattcgtacaaccactagtgatgctgatggtgaaattgttgcagaaaaaccggta
aacattactgaaactgaattattacctgcgttagagtcgtttcgtggcgagacgaaacaa
gtaccatcaatgtactcggcgttaaaacataagggccagcctttatataaatatgctcgc
gaaggcattaccattgaacgtgaagcacgtgatatcactgttttcaggttagatttactg
cgctttgaaggcgatgaagtcgatttagaaattcacgtatcaaaaggtacatacattcgt
actattattgatgatttaggcgaactgttaggctgcggtgctcatgtaagtatgttacgc
cgtactgccgttggaaactatccggttgataaaatggtcactatggagcaattagaaacg
ctccttaatgatgctaaagagcagaacattagtccatctgaagtactcgataagctattg
ttaccaatggatactgccgtttacatactagactcagtaactattgacgctgaatcagcg
cgttatttacgctttggtaatcctgttatgataactaatgcccctgcaaccgatacttta
ttaaaagtatatgttggtgaagagcaagagtttatcggtgttggtattatcaatgacgat
ggtatgttagcgccgaaacgaatcgtagttgatcatcaaaaaactgattcataa
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