Thalassotalea fonticola: RI844_03420
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Entry
RI844_03420 CDS
T10167
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
tft Thalassotalea fonticola
Pathway
tft03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tft00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RI844_03420 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tft03400
]
RI844_03420 (uvrB)
DNA repair and recombination proteins [BR:
tft03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RI844_03420 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RI844_03420 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
UVR
ResIII
DEAD
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WOH38298
UniProt:
A0ABZ0GR67
LinkDB
All DBs
Position
841204..843201
Genome browser
AA seq
665 aa
AA seq
DB search
MSKEFQIVSDYTPSGDQPTAITQLMDGLDSGLAHQTLLGVTGSGKTFTVANVIAKQQRPT
MILAPNKTLAAQLYGEMKEFFPHNAVEYFVSYYDYYQPEAYVPTTDTFIEKDASINEHIE
QMRLSATKALLERRDVVIIASVSAIYGLGDPDSYLKMMLHLRQGDIINQRDILRRLAELQ
YTRNDVAFQRATYRVRGDVIDIFPAESDRLAIRVELFDEEVERISQFDPLTGQVESILPR
ITIYPKTHYATPREKILAAVEKIKVELKERATQLKDNNRLVEEQRIVQRTQFDIEMMTEL
GYCSGIENYSRYLSGREPGDAPPTLFDYLPDDGLLILDESHVTVPQIGAMYKGDRSRKQN
LVEYGFRLPSALDNRPMKFDEFTSISPQTIYVSATPSDYEIDKSSGEVAEQVVRPTGLLD
PEIEVRPVETQVDDLLSEINIRVAKNERVLATTLTKRMAEDLSEYLTEHGVATRYLHSDV
DTVERMEIIRDLRLGKFDVLIGINLLREGLDLPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNLEGRAILYADKITKSMKKAIDETERRRAKQHNYNIENGITPKGLVKKIQDVMGVG
SGLKEGDLKLASPKAEQHILTTTEIDKKVASLENEMFDHARNLEFEKAAACRDEISKLRN
LQLKT
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagaatttcaaatcgtatctgattataccccaagtggtgatcaaccaacggcc
ataacccaattaatggacggtttagactctggtttagcacatcaaacactactaggagtg
acaggctctggtaaaaccttcactgttgcaaatgttattgccaagcagcagcgcccaaca
atgatattagcacctaataaaacactcgcagctcaactttatggtgaaatgaaggaattt
ttcccccataacgcggttgaatatttcgtctcatactacgattattatcaaccagaagct
tatgttccaaccacagatacgtttattgagaaagatgcttcaataaatgaacatatcgaa
caaatgcgtttatcggcgactaaagcgctattagagcgtcgcgatgttgtcattattgct
tctgtatcggcgatatatggtttaggcgatcctgattcatatttgaaaatgatgttgcac
cttagacaaggcgatattattaatcagcgcgacattttaagacgtttggctgaattacaa
tacactcgtaatgatgtagcgtttcaacgtgctacgtatcgcgttaggggcgatgttatt
gatatatttcctgctgagtcagaccgacttgccattcgagttgaattgtttgatgaagaa
gtggagcgcattagccaatttgatccacttactggtcaggtcgaaagtatattgccgagg
ataactatttatcccaaaactcactacgcaacaccacgtgaaaaaatacttgccgcagtt
gaaaaaatcaaagttgaactaaaagagcgcgcaacacaattaaaagataacaatcgcctg
gtagaagagcagcgaatagtacaacgaactcaatttgatattgaaatgatgacagagctg
gggtattgctctggtatagaaaactactctcgttatttatctggtcgtgaacctggtgat
gcgccgccaacgttatttgattatttgccagatgatggcttacttattttagatgaatcg
catgtcaccgtaccgcaaataggtgccatgtataaaggcgataggtcgcgtaaacaaaac
ctggttgaatatggctttcgtttaccttctgcgctagataacagaccaatgaagtttgat
gaatttacttcaatatcaccgcagactatctatgtatccgctacgccaagtgactatgaa
atagacaagtcgtcaggagaagtagccgagcaagtagtacggcctacagggttgttagat
ccagaaatagaagttcgtcctgttgagacacaagtagatgatctattgtctgaaattaat
atcagagttgctaaaaacgaacgagttttggcaactaccttaacgaaacgaatggctgaa
gatttaagcgaataccttaccgaacatggtgttgcaactcgttatttgcattcagatgtt
gataccgtagaacgtatggaaattattcgtgatttgcgcttaggtaagtttgatgtattg
atcggcattaacttattacgagaaggtctcgatttaccagaagtgtcgttagtagcgata
ttagatgctgataaagaaggctttttacgttcagagcgttcgttaattcaaaccattggt
cgagctgcccgtaacttagaaggccgggcgattttatatgctgataaaatcactaaatcg
atgaaaaaagcgattgatgaaacagaacgtcgtcgagctaaacagcataattacaatatt
gaaaatggcattacaccgaaagggttggttaaaaaaattcaagatgtaatgggcgttggc
agtggtctaaaagaaggggatctaaagcttgcttctcctaaggcagaacaacatatttta
actactacagaaatagataaaaaagttgctagccttgaaaatgaaatgtttgaccacgca
cgcaatttagagtttgaaaaagctgccgcatgtagagatgaaatatcgaaactacgaaat
ttacaacttaaaacttaa
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