Thalassotalea fonticola: RI844_15985
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Entry
RI844_15985 CDS
T10167
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tft Thalassotalea fonticola
Pathway
tft03420
Nucleotide excision repair
tft03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tft00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RI844_15985 (uvrD)
03430 Mismatch repair
RI844_15985 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tft03400
]
RI844_15985 (uvrD)
Enzymes [BR:
tft01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RI844_15985 (uvrD)
DNA repair and recombination proteins [BR:
tft03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RI844_15985 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
RI844_15985 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_22
DUF5906
Motif
Other DBs
NCBI-ProteinID:
WOH36857
LinkDB
All DBs
Position
3918677..3920848
Genome browser
AA seq
723 aa
AA seq
DB search
MDVSELLDSLNDKQRDAVAAPSKNMLVLAGAGSGKTRVLVHRIAWLVQVEQISPHSILSV
TFTNKAAAEMRGRVEQSIGGNIHGMWVGTFHGLAHRLLRMHFQEAKLPQTFQVLDSDDQL
RMIKRVVRSLQLDEKKWPAKQAMYYINGKKDEGLRPQHIDCQFDPTEQTFVKIYQTYQDT
CDRAGLVDFAELLLRAHELWLNNPILLEHYQQRFTRILVDEFQDTNAIQYAWLNMLGKKH
GNVMIVGDDDQSIYGWRGAKIENIQRFVKDFDAETIRLEQNYRSTANILNAANALITNNN
NRLGKDLWTEDDAGETISLYTAFNEIDEARFISGRIKQWLEEGNSLDDVALLYRSNAQSR
LLEEALLQARLPYRIYGGLRFFERQEIKDALAYLRLINNRNDDASFERIVNTPTRGIGNK
ALTLIRDCARSQGSTLWDACLHMIEQNELAGRSAKTIKAFVDLIVQLEDDSSNLNLDQQA
NHVIQHSGLKAMYQAEKGERAAARIENLNELVTACSTYEVDPEVEDELTPLTAFLTHASL
EAGESQADEYESAVQLMTLHSAKGLEFPLVFIVGMEEGMFPSQQSAEDIVRLEEERRLCY
VGMTRAMKKLYLTHAESRRLYGQEKYHRQSRFLKEIPDKFIDEIRMKNQVAKPKTTGRFS
NTITMETFENTGFKLGQQVMHQKFGEGVVLNFEGTGAQSRVQVNFSDHGTKWLVVAYARL
EAI
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggatgtttcagaattactcgactctttaaatgataaacagcgtgatgctgttgctgct
ccttctaaaaatatgttggtgttagcgggtgccggctcaggtaaaacacgagtgttggta
catcgtatcgcttggcttgtacaagttgagcaaatttcgccgcacagcattttatcggta
acttttactaataaagcagcggcggaaatgcgtggtcgggttgaacaatccataggtggt
aatattcatggcatgtgggttggtacgttccacggtttagctcatcgcttgttaagaatg
cattttcaagaagcaaagttacctcaaactttccaagtgctggattccgacgatcaacta
cggatgatcaaacgcgtagttcgctcattacaacttgatgagaaaaagtggccggctaag
caggcgatgtattacatcaatggtaaaaaagatgaaggcctaaggccgcagcatattgat
tgtcaatttgatccaactgaacaaacctttgtcaaaatttaccaaacctatcaagacact
tgtgatcgtgccggcttggttgattttgccgagttgttactgcgtgcccacgaactttgg
ttgaataaccctattttattagagcattaccaacagcgtttcactcgtattttagtggat
gagtttcaagataccaatgccattcaatacgcttggttaaatatgctcggtaaaaagcat
ggcaatgtgatgattgttggtgacgatgatcaatctatttacggatggcgcggcgctaaa
attgaaaacattcaacgctttgttaaagactttgatgcagaaactattcgcttagaacaa
aattatcgttcaaccgcaaatattctaaatgcagccaatgcattaattaccaataacaac
aatcgtttaggtaaggatttgtggactgaagatgatgccggtgaaaccatttctttatac
actgcatttaatgaaattgatgaagcgagattcatttcagggcgcattaagcaatggttg
gaagagggcaattcattagacgatgtcgccttgctatatcgttcaaatgcacaatcgcgg
ttactggaagaagcattattacaggctcgattgccatatcgtatttatggcggtttacgc
ttcttcgaacgtcaagaaattaaagatgctttagcttacttacgcttgatcaataaccgc
aatgacgatgcatcatttgagcgcattgttaatacgccaactcgtggcataggcaataaa
gcgttaacgttaattcgagattgtgcgcgcagccaaggttctacgctttgggatgcttgc
ctacacatgatagaacaaaatgaattagccgggcgtagtgcaaaaacaatcaaggcattt
gttgacttaatcgtgcaacttgaagacgactcaagcaatttaaatttagaccagcaagct
aaccatgtaatacagcacagtggtttaaaggccatgtatcaagctgaaaagggcgagcgt
gctgcggcaagaatagaaaacttaaatgaattagtcaccgcttgttcaacttatgaagtt
gaccctgaagtagaagacgaacttacaccactaaccgcattcttaactcatgcttcatta
gaagcaggcgaatcgcaagcggatgagtacgagtctgctgtgcaactgatgacactgcat
tctgctaaaggcctagagtttcctctggtgtttattgttggtatggaagaaggcatgttc
ccttcacagcagtcagctgaagatattgtacgtttagaagaagagcgccgtctttgttat
gttggcatgacccgagcaatgaaaaaactctacttaacgcatgctgaatcacgtcgttta
tacggccaagaaaagtatcatcgccaaagccggttcttaaaagaaattcctgataagttt
attgatgaaatcaggatgaaaaatcaagttgccaaacctaaaactaccggccgatttagc
aacacaattactatggaaacgtttgaaaataccggttttaagctcggtcagcaagtcatg
catcaaaaatttggtgaaggtgtggtattaaactttgaaggtactggcgcgcaatcacgg
gtacaggtgaattttagcgatcatggtaccaagtggctagttgttgcttacgccagatta
gaagcgatttaa
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