Thalassotalea fonticola: RI844_18425
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Entry
RI844_18425 CDS
T10167
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
tft Thalassotalea fonticola
Pathway
tft03410
Base excision repair
tft03430
Mismatch repair
tft03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tft00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RI844_18425 (recJ)
03430 Mismatch repair
RI844_18425 (recJ)
03440 Homologous recombination
RI844_18425 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tft03400
]
RI844_18425 (recJ)
DNA repair and recombination proteins [BR:
tft03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
RI844_18425 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RI844_18425 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
RI844_18425 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
WOH37314
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Position
4467983..4469722
Genome browser
AA seq
579 aa
AA seq
DB search
MDKQISRRAICDTSTLPEHLHPVLKQIYASRGISLPSELDQGAASMHKPSQLMGLDLACE
LLFAAIKENKRIIVVGDFDADGATSTALMMQGLSLLGSTNHDFIVPNRFEYGYGLTPEIS
EIAVAQGVDVIVTVDNGISCIPGVAKAKELGAMVIVTDHHLPGSSLPNADAIVNPNQHGC
TFPSKALAGVGVAFYLMAALRQTMRSNGWFASKQIPEPNMAQLLDLVALGTVADVVSLDQ
NNRILVAQGLKRIRAGATRPGIQALIEIAGKNQQKMVASDFGFGLGPRLNAAGRLDDMGL
GIQCLLETDLNKARVMAKDLDDLNKTRREIEQGMQFEAENVLKKLNFNDSNLPSALALFQ
EDWHQGVIGIVAGRLKEKYHRPTVVFASSNPDDNSDTAEIKGSARSIPGLHIRDLLEHID
SQHPNIILKFGGHAMAAGLSIKLADFDKFQTLLNEYAQKWLSAEMLQGKVLSDGELAKDA
FNLEFASLLRESGPWGQNFPEPVFDNHFKIIQQRIVGEKHLKLMVQIDDLAIDAIAFNVD
TSLWPNNQCEWVHLAYKLDINEFRGKQTVQLLVDHIEAA
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggacaagcaaatcagtcgacgtgcaatctgcgacacttcaacattacctgaacattta
caccctgtattaaagcaaatttatgcatctcgtggcatttctttgccaagtgaattagat
caaggcgcagcaagtatgcataagccttcacaattaatggggttagatcttgcctgtgaa
ttattatttgctgccattaaagaaaataagcgcattattgtagtaggtgattttgatgct
gatggcgcaacatcaacagcattaatgatgcaaggactaagcttactcggttcaacaaat
catgacttcatcgtgccgaatagatttgaatatggttatggattaacacctgaaataagt
gaaatagcagttgctcaaggcgttgacgttattgttaccgtcgataacggcataagttgc
attccaggggttgccaaagcaaaagagttaggtgctatggtgatagttaccgatcatcac
ttaccgggaagttccttacctaatgctgatgccattgttaacccgaaccaacatggctgt
acttttccgagtaaagccttggcaggggtaggggtcgcgttttatttgatggctgcactt
cgtcaaacaatgcgcagcaatggctggtttgcaagcaagcagatcccagagccaaatatg
gcacaacttctcgatttagttgctttaggaaccgtcgccgatgtggtgagtctggatcag
aacaaccgaattttggttgctcaaggtttaaagcgcattagagccggtgcaacacgcccg
ggtattcaggcgttaattgaaattgccggtaaaaaccaacaaaaaatggttgctagtgat
tttggttttggattaggtccaaggttaaatgctgcaggtcgtctagatgatatggggctg
ggtattcaatgtttactcgaaactgacttaaataaagcccgagtaatggcaaaagatctg
gatgacttaaacaaaacccgccgtgaaattgagcagggtatgcagtttgaggctgaaaat
gtacttaaaaagcttaattttaatgacagtaacttgccttctgcgttggcgttatttcaa
gaggattggcatcaaggtgttatcggtattgttgctgggcgattaaaagaaaagtaccat
cgaccaacagttgtttttgcaagtagcaatcctgacgacaatagcgacactgctgaaatc
aaggggtcggcgcgctcaattccggggttacatattcgcgatttattagagcatattgat
tcacaacatccgaatatcatattaaaatttggcggacatgcaatggctgccggactttct
ataaaacttgccgattttgacaagtttcaaacactgcttaatgaatatgcacaaaagtgg
ttaagcgcagaaatgctacaaggcaaggtactttctgatggcgaattagcaaaagatgcc
tttaatttagagtttgctagcttattaagagaatctggaccttgggggcaaaactttcct
gagcctgtgttcgataaccattttaaaattattcaacagcgaattgttggtgagaagcac
ttgaaactcatggtacaaattgatgatttagccattgatgctatcgcttttaatgttgac
acatctctttggcctaataatcaatgtgagtgggtacacttggcgtataaactcgacatt
aatgagtttaggggcaagcaaactgtgcagcttttagtggatcatattgaagctgcttaa
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