Thermobifida fusca: Tfu_0047
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Entry
Tfu_0047 CDS
T00265
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tfu
Thermobifida fusca
Pathway
tfu03030
DNA replication
tfu03430
Mismatch repair
tfu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Tfu_0047
03430 Mismatch repair
Tfu_0047
03440 Homologous recombination
Tfu_0047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tfu03032
]
Tfu_0047
03400 DNA repair and recombination proteins [BR:
tfu03400
]
Tfu_0047
Enzymes [BR:
tfu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Tfu_0047
DNA replication proteins [BR:
tfu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Tfu_0047
DNA repair and recombination proteins [BR:
tfu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Tfu_0047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
HHH_3
MCM10_OB
RNA_pol_I_A49
Motif
Other DBs
NCBI-ProteinID:
AAZ54085
UniProt:
Q47TX9
LinkDB
All DBs
Position
complement(49207..52773)
Genome browser
AA seq
1188 aa
AA seq
DB search
MTNDPFVHLHVHTEYSMLDGAAKLKPLFEEAARLGMPAVAMTDHGNMFGSYEFWQTSKES
GVKPIIGIEAYVAPESRFHKQRVFWGTGKTGDEAAEGGKDVSGGGRYLHLTMWARNAKGL
RNLFRLSSLASFEGYYTKPRMDLELMAQYSEGIMVTTGCPSGGVQTRLRLGQEREAIEYA
GKLRDIFGRDSVFVELMDHGLDIEREVRSGLLTVAKKLGLRPVVTNDSHYVTEDQAAAHD
ALLAVGVGKNLDDPTRFRFNGTGYYLKSAEEMRSLNTFDEWLEGCRNTLWIAEQVEDGAY
DDVFRPRDLMPKFPVPEGETQASWLRKEIERCIPNRYPNGPSREVRERIEHELSIIERMG
FPAYFLVVADICQYARRSGIALGPGRGSATGSMVAYVLGITDLDPLEHSLLFERFLNPER
VSMPDIDLDFDERKRGDMIRYVTERYGEDRVAQILTFGTIKAKAAIKDATRILGYPYALG
DKITKAFPPAVGGKEIPLSAVFDESHPRYNEAAELRQLIESNPDVRKVYETASGLEGLTR
GTGVHAAGVILSAEPLLDVIPLHKRETDGAIITGFPYPQCEEMGLLKMDFLGLRNLTVID
DAIQNIKANEGKEINLSALPLDNKKTYELLSRGDTLGVFQLDGGPMRALLKRMEPKKFGD
IAAVLALYRPGPMAANAHNDYADRSNGRQEITPIHPELKEALDPILAESFHLIVYQEQVM
AIAQQLAGYTLGGADLLRRAMGKKKKEALEKEYTKFSEGMLSRGFSKEAMQALWDVMLPF
SGYAFNKSHTAGYGMISYWTAYLKANHPASYMAALLTSVADDKDKMAVYLAECRKMGIRV
LPPDVNESGLQFTPVGNDIRFGLGAVRNVGANVVESILKTREEKGKFTSFVDFLSKIELT
VCNKRVIESLIKAGAFDSLGHSRLDLYRHHEAAVDAVLSSKKQEAHGQFDLFGGGDEEDG
GESAPLGFSINWTGEEWDRKTKLAFEREMLGLYVSSHPLAGAERILARASDAPLLDVVNG
ERRNNDEVRIAGLISKVEKRINKAGNQWAIATVEDLDASIEALFFPKVYPLYVDALVEDT
AVSIKGRLNDRDGTFSLFVSEMSILDISHVSEGEPPVLLTIPEKRVTRELISELKQTLRS
HRGDTPVRIRVDNPRRSRIFAIDDYPVRVSPEFSGEVKSLLGPESITY
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
gtgacgaacgatcccttcgtccaccttcacgtccacaccgagtattcgatgctggacggt
gccgccaagctcaagccgctgttcgaggaagctgcccggttgggcatgcctgccgtggcg
atgacggaccacggaaacatgttcgggtcttacgagttctggcagacctccaaggagtcg
ggggtcaagccgatcatcgggatcgaggcgtatgtggcgcccgagtcccgcttccacaag
cagcgtgtgttctgggggacgggaaagaccggcgacgaggctgctgagggtggcaaggac
gtttctggcggcggccgctacctgcacttgaccatgtgggcgcggaacgcgaaagggctg
cgcaacctgttccggttgtcgtcgctcgcgtctttcgagggctactacaccaaaccgcgc
atggacttggagctgatggcccagtacagcgagggcatcatggtcaccaccgggtgcccg
tcgggtggggtgcagacccggctgcggctcggccaggagcgggaggctatcgaatacgcg
ggcaagctccgggatattttcggtcgcgactccgtgttcgtggagttgatggaccacggt
ctggatattgagcgggaagtccgctccggcttgttgactgtggcgaagaagctcggcctg
cggcccgtggtcaccaacgactcccactatgtgaccgaggaccaggcggccgcgcatgac
gcgctgctggccgtgggtgtgggcaagaacctcgacgaccctacgcgtttccggttcaac
ggcaccggctactacctcaaaagcgcagaagagatgcggtccctcaacacgttcgacgaa
tggttggaggggtgccgcaacacgctgtggatcgccgagcaggtggaggacggcgcatac
gacgacgtgttccgcccccgggacttgatgccgaagttcccggtgccggaaggggagacg
caggcgagctggctgcgcaaggagattgaacgctgcatcccgaaccggtaccccaacggg
ccgagccgggaagtgcgggaacgtatcgaacacgagttgagcatcatcgagcggatgggg
ttccccgcctacttcctggtggtggcggacatctgccagtacgcgcggcgttcggggatc
gcgctggggccggggcgtggttcggcgaccgggtcgatggtggcctacgtgctcgggatc
accgacttggacccgttggagcactcgctgctgtttgaacggttcctcaaccccgagcgt
gtgtcgatgcctgacatcgacttggacttcgacgaacgtaagcgcggcgacatgatccgc
tacgtgacggaacgctacggggaggaccgggtcgcgcagatcctcacgttcggcacgatt
aaggcgaaggctgcgatcaaggacgcgacgcggatcctcggctacccgtacgcgctcggt
gacaagatcacgaaggcgttcccgccggcggtgggtggtaaagagattccgctgtccgcg
gtcttcgacgaaagccacccccgctacaacgaggcggctgagctgcggcagctcatcgaa
tccaacccggacgtccgcaaggtgtatgagactgcaagcggtctggaagggctgacccgg
ggcacgggtgtgcacgcggcgggtgtgatcctctccgctgagccgctgctcgatgtgatc
ccgctgcacaagcgggagacggacggggccatcatcacaggcttcccctatccccagtgc
gaggagatgggcctgttgaagatggacttcctggggttgcggaacctgacggtcatcgac
gacgcgatccagaacatcaaggccaacgagggcaaggagatcaacctgtccgccctgccg
ttggacaacaagaagacgtatgagctgctgtcgcgcggggacacgctcggcgtgttccag
ctcgacggtggtccgatgcgggcgctgctcaagcggatggagccgaagaagttcggtgac
attgccgctgtgctcgccctgtaccggcctggtccgatggcggcgaacgcgcacaacgac
tatgcggaccggtcgaacgggcgccaggagatcactccgatccacccggagctgaaggag
gcgttggacccgatcctcgccgagtctttccacctgatcgtctaccaggagcaggtgatg
gcgatcgcccagcagctcgccgggtacacgctgggcggcgcggacttgttgcgccgcgcg
atggggaagaagaagaaggaggccctggagaaggagtacaccaagttctccgaaggcatg
ctgtcccggggcttctccaaggaggccatgcaggccttgtgggacgtgatgcttcccttc
tccggctacgcgttcaacaagtcgcacacggccgggtacgggatgatttcttattggacc
gcctatttgaaggcgaatcacccggcgtcctacatggcggctctgctcacgtcggtggcg
gacgacaaggacaagatggctgtctatctggcggagtgccggaagatgggcatccgggtg
ctgccgccggacgtcaacgagtcgggtctgcagttcaccccggtcggcaacgacatccgt
ttcgggttgggcgcggtccgcaacgtgggcgccaacgtggtggagtcgatcctcaagacc
cgtgaggagaaggggaagttcacgtcgtttgtagacttcctgtcgaagattgagctgacg
gtctgcaacaagcgggtcatcgagtcgctgatcaaggcgggggcgttcgactcgctcggc
cactctcgcctggacttgtaccggcaccacgaggccgcggtggatgcggtgctcagttcg
aagaagcaggaggcgcacggccagttcgacctgttcggcgggggtgacgaggaggacggc
ggggagagcgcgccgctgggcttctccatcaactggacgggtgaggagtgggaccggaag
accaagctcgcgtttgagcgggagatgctcggcttgtacgtgtccagccatcctttggcg
ggggccgagcggattctggcgcgggctagtgacgccccgctgctggacgtggtgaacggg
gagcgccgcaacaacgacgaggtgcggattgcgggcttgatctccaaggtggagaagcgc
atcaacaaggcgggcaaccagtgggcgatcgccacggtcgaggatttggacgcttctatt
gaggctttgttcttccccaaggtgtatccgctgtatgtggacgctttggtggaggacacc
gcggtgtcgatcaaggggcggctcaacgaccgggacggcaccttctccctcttcgtgtcc
gagatgtcgattttggacatttcccatgtgtctgagggggagccgccggttctgttgact
attccggagaagagggtcacccgggagttgatcagcgagctgaagcagacgctgcgcagc
caccggggggacacgccggtgcggatccgggtggacaacccgcggcggtcgcggattttc
gcgatcgacgactatccggtgcgggtcagcccggagttttcgggtgaggtgaagagcctg
ctgggaccggagtcgatcacctactga
DBGET
integrated database retrieval system
