Thermobifida fusca: Tfu_0534
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Entry
Tfu_0534 CDS
T00265
Name
(GenBank) Deoxyribodipyrimidine photo-lyase type I
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
tfu
Thermobifida fusca
Brite
KEGG Orthology (KO) [BR:
tfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfu03400
]
Tfu_0534
Enzymes [BR:
tfu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Tfu_0534
DNA repair and recombination proteins [BR:
tfu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Tfu_0534
Prokaryotic type
Tfu_0534
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AAZ54572
UniProt:
Q47SJ5
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All DBs
Position
complement(606046..607305)
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AA seq
419 aa
AA seq
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MSTTVVLFTRDLRVSDHPALHAAVTEADRVVPLFVVDPALVRVSARNRIAYLLEALAELR
GLLRERGGELVVRQGDTVAETVRIVAEAGAQAVYLSADVSAAAVRRARQLTEAVRAAGAH
VRTFPGVTVVPPGALRPAHGDHYQIFTPYLNAWRAAQWRSPRPAPERVRLPEGLVPGPLP
GAELIRLGTGVLAPQREQGGPRTARERIRAWLAQPNQDSRFGCHLHFGCLSPLEVALVAR
EHPRGALLLRQLALRDFHHQVLQAFPRLPRADYRPRPIQWRDDDSAFAAWCSGRTGVPIV
DAGMRQLLWEGYVPGRIRMLTATYLTQVLRIHWKRGADHFYSLLVDGDVANNYGNWQQIA
GTGGVPRPARRINLYRQAERYDPSGDYVRRFVPELRSISGSAVHHPPVPRPGGYPPPLR
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
gtgtccaccaccgtcgtgctgttcacccgtgaccttcgggtgtccgaccatcccgcactg
cacgccgcagtcaccgaagcggaccgggtggtgccgctgttcgtcgtcgacccggcgctg
gtgcgggtctcggcacgcaatcggatcgcctatctgctcgaggcgctggccgagctccgc
gggctgctgcgggagcgcggcggcgagcttgtcgtccgccagggggacacggtcgccgaa
accgtccgtatcgtggcggaggccggggcacaagcggtgtatctcagcgcggatgtgagc
gcggccgcggtgcggcgggcccggcagttgacggaggcggtgagggctgcgggggcccac
gtgcggactttcccgggggtgaccgtggtgccgccgggagcgctgcgccccgcgcacggc
gaccactaccagatcttcaccccgtatctgaacgcgtggcgtgccgcgcagtggcggtcc
ccgcggcccgccccggagcgggtgaggctgccggagggtctggtgccggggccgctgccc
ggcgctgaactgatccggctggggacgggggtgctcgccccgcagcgggagcagggcgga
cctcgtaccgcgcgggagcggatccgcgcgtggcttgcccagcccaaccaggattcccgg
ttcggctgccatctgcatttcggttgtctttccccgttggaggtggcgctcgtggcgcgg
gagcaccctcggggtgcgctgctcctgcggcagttggcgctccgcgacttccaccaccag
gtgctgcaggctttcccgcggttgccccgggccgactatcggccgcggcccatccagtgg
cgggatgacgattccgcgtttgcggcgtggtgttcgggcaggacgggtgttcccatcgtg
gatgcgggaatgcgccaattgctgtgggaggggtacgtgccggggcggatccggatgctg
accgccacctatctcacccaggtgctgcgcatccactggaagcggggcgcggaccacttc
tactccctgctggtggacggggatgtcgcgaacaactacggcaactggcagcagatcgcg
ggcaccgggggcgtgccgcggccagcgcgccggatcaatctgtaccggcaggcggagcgc
tacgaccccagcggcgactatgtgcgccgtttcgttccggagttacgcagcatttccggg
agcgcggtccaccatcctccggtgccgcgtccgggcggctatccgccgccgctgcggtag
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