Thermobifida fusca: Tfu_0784
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Entry
Tfu_0784 CDS
T00265
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tfu
Thermobifida fusca
Pathway
tfu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tfu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Tfu_0784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfu03019
]
Tfu_0784
03016 Transfer RNA biogenesis [BR:
tfu03016
]
Tfu_0784
Enzymes [BR:
tfu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Tfu_0784
Messenger RNA biogenesis [BR:
tfu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Tfu_0784
Transfer RNA biogenesis [BR:
tfu03016
]
Prokaryotic type
tRNA degradation factors
Tfu_0784
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_KhpA-B
KH_5
PCB_OB
KH_2
Motif
Other DBs
NCBI-ProteinID:
AAZ54822
UniProt:
Q47RU5
LinkDB
All DBs
Position
926033..928336
Genome browser
AA seq
767 aa
AA seq
DB search
MEGVYSAEAVIDNGRFGTRTIRFETGRLARQATGSATAYLDDETMVLSATTVSKRPKEAL
DFFPLTVDVEERMYAAGRIPGSFFRREGRPSEDAILTCRLIDRPLRPSFQKGLRNEIQIV
ATVLALHPDHLYDVIAINAASMSTQLAGLPFSGPIGGVRVALVEGQWVAFPTHSELANAT
FDMVVAGRVLDNGDVAIMMVEAESTPHTLRLVAEGAIGPNEQTVAEGLEAAKPFIKVLCR
AQQTVAEAAGKPPGEYPIFIDYQDDAYAAVEEAIHDELAAALTIADKQEREAELDRVKAL
VAEKLAEDFEGREKELAAAFRALTRKLVRERIVKDGVRIDGRGVKDIRSLTAEVNVIPRV
HGSALFERGETQILGITTLNMLRMEQTIDTLNPERTKRYMHNYNFPPYSTGETGRVGAPK
RREIGHGALAERALVPVLPSREEFPYAIRQVSEAIGSNGSTSMGSVCASTMSLMAAGVPL
KDMVAGIAMGLIYEDGKYVTLTDILGAEDAYGDMDFKVAGTRDLITALQLDTKLDGIPAE
VLASALQQARGARLAILDVMSEAINRPAEISPHAPRILTVKVPIDKIGEVIGPKGKMINS
IQDETGAEITIEDDGTIYIGATDGPSAEAARDAINSIANPTMPEVGERYLGTVVKTTAFG
AFVSLLPGKDGLLHISQIRKMHGGQRIENVEDVISIGEKIHVEVRDIDERGKLSLVPVEV
IEAEAVAAPNGGESPNGAKKTDASGNGAKQPRRRRRTRSSSRSSENT
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgtgtattctgccgaggccgtcatcgacaacggccgtttcggcacccgtacg
atccgcttcgagaccggtcgcctggcccgccaggccacagggtcggctacggcctacctt
gacgacgagacgatggtcctgtcggcgacgaccgtgtcgaagcgccccaaggaggccctg
gacttcttcccgctcacggtcgacgttgaagaacgcatgtacgccgcggggcgcatcccc
ggctcgttcttccgcagggaggggcgtccctcggaggacgcgatcctcacctgccggctc
atcgaccggccgctgcgtccgtccttccagaaagggctgcgcaacgagatccaaatcgtt
gcgaccgtgctggccctgcacccggaccatctctacgacgtcatcgcgatcaacgccgcg
tcgatgtccacccagcttgccggactgccgttctccggcccgatcggcggcgtgcgggtg
gccctggtcgaaggccagtgggtggcgtttcccacgcactcggagctggccaacgccacg
ttcgacatggtcgtggccggccgggtgctggacaacggcgacgtcgcgatcatgatggtg
gaggccgagtccaccccgcacaccctgcgactggtggcggagggagcgatcggccccaac
gagcagaccgtcgcggaaggcttggaagccgccaagccgttcatcaaggtgctgtgccgc
gcccagcagaccgtggctgaggccgcgggcaagccgcccggcgagtacccgatcttcatc
gactaccaggacgacgcgtacgccgccgtcgaggaagcgatccatgacgagctcgccgcg
gcgctcacgatcgcggacaagcaggagcgggaagccgaactcgaccgggtcaaggcgctg
gtcgccgagaagctcgccgaggacttcgaaggccgcgaaaaggagctggccgcagcgttc
cgcgcgctcacccggaagctggtgcgggagcggatcgtcaaggacggggtccgtatcgac
ggccgcggtgtgaaggacatccggtctctcaccgccgaagtcaacgtcattccgcgcgtg
cacgggtcggccttgttcgagcgcggggaaacccagatcctggggatcaccacgctgaac
atgctccgcatggagcagaccatcgacacgctcaacccggagcgcaccaagcgctacatg
cacaactacaacttcccgccgtactccacgggggagaccgggcgggtcggcgcgccgaag
cgccgcgagatcgggcacggggcgctcgccgaacgcgctctcgtcccggtgctgccgtcg
cgggaagagttcccctacgcgatccggcaggtgtcggaggcgatcggctccaacggctcc
acgtcgatggggtcggtgtgcgcctccaccatgtcgctgatggcggcgggtgtgccgctc
aaggacatggtggccggtatcgccatgggcttgatctacgaggacggcaagtacgtcacc
cttaccgacatcctcggtgcggaagacgcctacggtgacatggacttcaaggtcgcgggc
acgcgcgacctcatcaccgcgctgcagttggacaccaagctcgacgggatccccgccgag
gtgctggcgtccgcgctgcagcaggcccgcggggcgcggctggccatcctcgacgtcatg
tcggaggccatcaaccggcccgctgagatcagtccgcacgcgccgcgtatccttacggtc
aaggtgccgatcgacaagatcggcgaggtcatcggccccaagggcaagatgatcaactcg
atccaggacgagaccggcgccgaaatcaccatcgaggacgacggcaccatctacatcggc
gccaccgacgggccgtccgcggaggccgcccgcgacgccatcaacagcatcgccaacccg
accatgcccgaggtcggggaacgctacctcggcacggtcgtgaagaccaccgcgttcggg
gccttcgtgtcgctgctgcccggcaaggacgggctgctgcacatctcgcagatccgcaag
atgcacggcggccagcggattgagaacgtcgaagatgtcatcagcatcggggagaaaatc
cacgtcgaagtccgggacatcgacgaacggggcaagctctccctggtgcccgtcgaagtc
atcgaagctgaagctgttgccgcccccaacggcggggagagcccgaacggggcgaagaag
accgacgccagcggcaacggcgccaagcagccgcgccgccgtcgccgcacccggtcgtcc
agccgttccagtgagaacacctga
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