Thermobifida fusca: Tfu_0887
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Entry
Tfu_0887 CDS
T00265
Name
(GenBank) RNA polymerase sigma-B factor
KO
K03090
RNA polymerase sigma-B factor
Organism
tfu
Thermobifida fusca
Brite
KEGG Orthology (KO) [BR:
tfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tfu03021
]
Tfu_0887
Transcription machinery [BR:
tfu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Tfu_0887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r4_2
HTH_24
HTH_AsnC-type
HTH_23
GerE
Sigma70_ECF
HTH_Crp_2
DUF7343
DUF2951
DUF3734
Motif
Other DBs
NCBI-ProteinID:
AAZ54925
UniProt:
Q47RJ2
LinkDB
All DBs
Position
complement(1047916..1048839)
Genome browser
AA seq
307 aa
AA seq
DB search
MTEPGGSRATTPIRGARTTPMTLRGTLPMSVSVSHSGHSSNGSHSRNSRPPRHADEAYLR
ETRELLAELDRVRDDPKARERIYLKLTELHAPVARRIARQYRNRGEPEEDLRQVAMVGLY
NAIRNFDPAYGKEFISYALPMMTGEVKRHFRDRTWAIRVPRKYQEKRAELNRVTAEFTQR
HGRSPTVRELAELLEMDEEQTLELIDAARAYSTLSLDVPFGPDDDGATLGDTLGGLDDAL
ERVVDHAALRPALAALSPRDRRILLLRFAGDKTQAQIAEIVGLSQMHVSRRLAAILTTLR
RQLVGDH
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgacagagccgggcggaagcagggccaccacacccatccgaggtgcgcggaccacaccc
atgaccctgcgggggacgttgcccatgtccgtttcggtttcccacagcggccacagctcc
aacggcagtcacagccgtaacagccggccgccacgccacgccgacgaagcgtatcttcgc
gagacccgcgagctactcgccgaactcgaccgggtccgggacgacccgaaagctcgcgaa
cgcatctacctcaaactcaccgagctgcacgctcccgtggcccgacgcatcgcccgccag
taccgcaaccgcggcgagcccgaagaagacctgcgccaggtcgcgatggtggggctgtac
aacgccatccgcaacttcgaccccgcctacggcaaagagttcatctcctatgcgctgccg
atgatgaccggcgaggtgaaacgccacttcagagaccgcacctgggcgatccgggtcccg
cgcaaataccaggagaagcgcgccgaactcaaccgggtcaccgcagagttcacccagcgg
cacggccgctcgcccacggtccgggagctcgcggagctgctggagatggacgaggagcag
accttggagctcatcgacgcggcccgcgcctacagcacgctctccctcgacgtgccgttc
gggcccgacgatgacggcgccaccctgggcgacaccctgggcggactcgacgacgcgttg
gaacgtgtcgtcgaccatgcggcgctgcgccccgccttggccgccctgtcgccccgcgac
cgtcgtatcctgctgctccgcttcgccggggacaagacccaggcgcagatcgccgagatc
gtcggactgtcgcagatgcacgtctcacggcggctcgccgcgatcctgacgacgctgcgg
cgccaactcgtcggggaccactga
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