Thermobifida fusca: Tfu_1027
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Entry
Tfu_1027 CDS
T00265
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tfu
Thermobifida fusca
Pathway
tfu03030
DNA replication
tfu03430
Mismatch repair
tfu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Tfu_1027
03430 Mismatch repair
Tfu_1027
03440 Homologous recombination
Tfu_1027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tfu03032
]
Tfu_1027
03400 DNA repair and recombination proteins [BR:
tfu03400
]
Tfu_1027
Enzymes [BR:
tfu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Tfu_1027
DNA replication proteins [BR:
tfu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Tfu_1027
DNA repair and recombination proteins [BR:
tfu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Tfu_1027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
UVR
RNase_H_2
DUF7508
Motif
Other DBs
NCBI-ProteinID:
AAZ55065
UniProt:
Q47R52
LinkDB
All DBs
Position
complement(1201754..1203526)
Genome browser
AA seq
590 aa
AA seq
DB search
MLFWENRVPLLGGPPPLAGPYPGGVTVPKDLVQGSFDDLGRPLTDVTFVVVDVETTGTHP
ATAALIEVGAVRLRDGQVLDEFTTLVNPHAPVPASITLLTGITTAMVESAPSPAAALSAF
LDFAGFRPGTVLVAHNAPFDVRFLKAACARHGIPWPSPAVLDTLQLARRLVPRGEVRNHR
LDTLARVFGAHPPAHRALDDARATADVLRGLVGRLRARGVDTWEELRAFRSPVTSGQRSK
RHLADGIPEAPGVYVFEDASGDPLYVGKSVNLRARVRSYFTAAEQRGRIKEMVGRAVRVQ
PIVCATAVEAEVRELRLIAARKPPYNRRSRHPERAPWLVITAEEFPRLAVVRQVGDNYLG
ALGPFSSSRTALLARDALHQAFPVRQCTHRITPPRPDAACALAEMGRCGAPCTGAQSAAE
YAAHVQAVAQAMTGDVSAVVAALTARIDTLARELRYEEAALHRDRLSAFLAAAVRTQRVR
ALSAVPHLVAARPAGADWEVCVVRYGRLAGSARLRPGADPHTLLRTLVRTAESVPPPAGA
LPRADAAETECLLRWLEAPDVRLLEVEGSWVSPVGGAERYRQWIYRHTPA
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgctcttctgggaaaaccgtgtgccgctcctcggcggccctccaccgctggccgggccg
taccctggcggggtgacagtacccaaggacctggtccaggggtctttcgacgacctgggc
cgccccctcacggacgtgacgttcgtggtggtcgacgtggagaccaccggcacccacccg
gcgacggcagcgctgatcgaggtcggggcggtgcgtctccgcgacggacaggtcctggac
gagttcaccaccctggtgaacccgcacgcccctgtgcccgcgtcgatcaccctgctcacc
gggatcaccacggccatggtggagtccgcgccctcgcctgcggcggcgctctccgcgttc
ctggacttcgccgggttccgtcccggcaccgtgctggtcgcgcacaacgccccgttcgac
gtgcgtttcctcaaagccgcgtgtgcccggcacgggatcccctggccctcccccgcggtg
ctggacacgctgcagctcgcccgccgcctcgtcccgcgcggcgaggtccgcaatcaccgg
ctcgacacgctcgcccgggtcttcggtgcccacccgcccgcccaccgggcgctcgacgac
gcccgcgccaccgcggacgtgctgcgcggcctggtggggcggctccgtgcccgcggtgtg
gacacatgggaggagctgcgcgcattccgcagccctgtcacttccgggcagcgcagcaaa
cgccacctggccgacgggattccggaagcgcccggcgtctacgttttcgaagacgcctcc
ggcgacccgctgtatgtggggaaaagcgtcaacctgcgggcccgggtgcggtcctatttc
accgccgcggaacagcgcgggcggatcaaggagatggtgggccgggccgtccgcgtgcag
ccgatcgtgtgcgccacggccgtggaagccgaagtccgggagctgcggctgatcgccgcg
cgcaaaccgccctacaaccggcggtcccggcacccggagcgcgccccctggctggtcatc
accgcggaagagttcccgcgcctggccgtcgtgcggcaggtgggcgacaactacctgggc
gccctcgggccgttctccagttcccggacggccctgctagcccgggacgccctccaccag
gcgttccccgtgcgccagtgcacgcaccgcatcaccccgccccgccccgatgcggcctgc
gcgctggcggagatgggccgctgcggggcgccgtgcaccggagcccagtcggccgccgag
tacgccgcgcacgtccaggccgtggcccaggcgatgactggtgacgtgtccgcggtggtg
gcggccctcactgcgcggatcgacacgctcgcccgcgagctgcgctacgaggaggcggcc
cttcaccgggaccggctgtcggcgttcctggcggctgcggtgcgcacgcagcgggtgcgg
gctctcagcgcggtcccgcacctggtggcggcccggcctgcgggggcggactgggaggtg
tgcgtggtgcggtacggccgcctggcgggcagcgcccgcctccgtcccggtgctgatccg
cacacgctgctgcgcaccctggtgcgcaccgcggagagcgtgccgccccctgcgggtgcg
ctgccgcgcgcggacgccgcggagaccgagtgtctgctgcgctggttggaggcgcccgac
gtccggctgctggaggtggaggggtcgtgggtctcccccgtcggcggcgcggaacgctac
cggcagtggatctaccggcatacgccggcatag
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