Thermobifida fusca: Tfu_1073
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Entry
Tfu_1073 CDS
T00265
Name
(GenBank) primosomal protein N' (replication factor Y) (superfamily II helicase)
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
tfu
Thermobifida fusca
Pathway
tfu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Tfu_1073
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfu03400
]
Tfu_1073
Enzymes [BR:
tfu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Tfu_1073
DNA repair and recombination proteins [BR:
tfu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Tfu_1073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
Motif
Other DBs
NCBI-ProteinID:
AAZ55111
UniProt:
Q47R06
LinkDB
All DBs
Position
complement(1252643..1254676)
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AA seq
677 aa
AA seq
DB search
MSDQTDPAEEALFEAPRASKPSRPRSRRPAPTRSVARVVVDTPLPHLDHPFDYRVPESLD
QDAVPGCRVRVRFNGQLLDGFLLERADTSDFPGRLAYLHQVVSPEPVLTPEIAALARIVA
DHYAGTLSDVLRLAIPPRHARVEKETPHTPPPPPPLPEPDPDPGPWADYPTGPAFLTALR
DQRAPRAVWTALPGPQWRDAIAAAAHTAAVAGRGVLIVVPTGRDVASLDAALTARLGPGH
HVALTAELGPAERYRRWLSVLRGHVRVVVGTRAAMFAPVRDLGLVVLWDDGDDVHSDPHA
PYPHARTVLSLRAHYSRSAVLIGSHTRTAESALLVESGWAHPIVADRALVRRRAPLVRAA
GDDAELARDEAARTARLPSLALRVARQAARHGPVLFQVPRRGYLNALACARCRTPARCAA
CRGPLALRSAHAIPYCRWCGHIAGDWRCPSCEFPRLRATVVGARRTAEELGRAFPALPVR
TSGRDEVLTEVPATPALVVATPGAEPTVPGGYAAAVLLDGWALLGRADLRAAEEALRRWC
NAAALVRPAAEGGQVVVLADAALPAVQALIRWSPAAFAERELAERRELGFPPAVTMASVT
GDPERVREFLAQLDLPEAAELLGPVPVGTDGTERALLRIRRAAARELSAALKAASAARSA
RREEKSVHVRVDPLDVL
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaccagaccgatcccgctgaggaagccctcttcgaagcgccgcgcgcctccaag
ccctcgcgtccccgcagccgccgcccagcccccacccggtccgtggcgcgcgtcgtcgtg
gacaccccgctgccccacctggaccaccccttcgactaccgggtccccgaatccttggac
caggacgccgtgcccggctgccgggtccgggtccgcttcaacgggcagctgctcgacggc
ttcctgctcgagcgggcagacacctccgacttccccggccggctggcctacctccaccag
gtggtctcccccgaaccggtcctcaccccggagatcgccgcactggcccggatcgtcgcc
gaccactacgcgggcacgctcagcgacgtgctccggctggccatcccgccccggcacgcc
cgcgtcgagaaagaaaccccgcacaccccgcccccaccacccccgctccccgaacccgac
cccgaccccgggccttgggccgactatccgaccggcccggcgttcctcaccgcactccgc
gaccagcgagccccgcgcgccgtgtggaccgcactgcccgggccccagtggcgcgacgcg
atcgcggcggccgcccacaccgcggccgtcgcgggacgcggagtcctcatcgtcgtgccc
accgggcgcgacgtggcgagcctcgacgcagcgctgaccgcgcggctcggccccggccac
cacgtcgcgctcaccgccgagctcggtcccgccgaacgctaccggcgctggctgtcggtc
ctgcgcggccacgtgcgggtcgtggtcggcacccgcgccgccatgttcgcccccgtccgc
gacctgggcctggtggtgctgtgggacgacggcgacgacgtgcacagcgacccgcacgcc
ccctatccgcacgcccgcaccgtgctctcgctgcgcgcccactacagccgctccgcggtc
ctcatcggctcccacacacggaccgcggaaagcgccctcctcgtcgaatcggggtgggcg
cacccgatcgtcgccgaccgggccctcgtccggcgccgcgcccccctggtgcgagccgcg
ggcgacgacgcggaactcgcccgcgacgaggcggcccgcacggcccggctgccgagcctc
gcgctgcgggtagcccgacaggccgcacgccacggccccgtcctgttccaggtgccgcgg
cgcggctacctcaacgcgctggcctgcgcccgctgccgcactccggcccgctgcgccgcc
tgccgggggccgctcgccctgcgcagcgcccacgccatcccctactgccgctggtgcggg
cacatcgccggagactggcgctgcccgtcctgcgaattcccccggctgcgcgccaccgtg
gtgggggcgcgccgcaccgccgaagaactggggcgggccttccctgccctgccggtgcgc
acgtcgggccgcgacgaagtgctcaccgaagtccccgccaccccggcactggtcgtggcg
acaccgggagccgagccgacagtgcctggagggtatgcggcggcggtgctgctcgacggc
tgggccctgctgggacgggccgacctgcgcgccgccgaggaggcgctgcgccgctggtgc
aacgctgccgcgctagtgcgccccgcagccgagggaggccaggtcgtcgtgctggcggat
gcggcgctccccgccgtgcaggcgctcatccggtggagcccggcggctttcgcggaacgg
gagctcgcggaacggcgggagctcggcttcccgcccgcggtcaccatggcgtcggtcacg
ggggacccggagcgggtgcgggagttcctcgcgcagctcgacctgcccgaagcagcggaa
ctgctcggcccggtccccgtcggcaccgacggaaccgaacgcgccctgctgcgcatccgg
cgggccgcggcccgggaactgtccgcggccctcaaagcggcgagcgcggcccgcagcgcc
cgccgggaagaaaaatcggtgcacgtgcgagtggacccgctcgacgtgctgtag
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