Thermobifida fusca: Tfu_1541
Help
Entry
Tfu_1541 CDS
T00265
Name
(GenBank) AP endonuclease, family 1:Exodeoxyribonuclease III xth
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
tfu
Thermobifida fusca
Pathway
tfu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Tfu_1541
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfu03400
]
Tfu_1541
Enzymes [BR:
tfu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Tfu_1541
DNA repair and recombination proteins [BR:
tfu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Tfu_1541
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AAZ55577
UniProt:
Q47PP2
LinkDB
All DBs
Position
complement(1776405..1777208)
Genome browser
AA seq
267 aa
AA seq
DB search
MSSLVIATVNVNGLRAAARKGFVEWLAGTKADVVCLQETRAELDQLPPEVAEPDGWHVVL
VPAATKGRAGVAVYSRMKPDAVRIGFGSAEFADSGRYVEADFGPVSVASLYLPSGQVGTP
LQEEKERFMAEFLPYLVRRRTEVEAQGRELAVCGDWNIAHQEADLKNWRGNRKNSGFLPE
ERQWLSRVYEEAGYVDVVRALHPDQDGPYTWWSYRGRAFDNDAGWRIDLQVATPGLAARA
QEAWVERAPSHDQRWSDHAPVTVVYAG
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctctggtcattgcgacggtcaacgtcaacgggctgcgcgcggcagcgcggaaa
gggttcgtggagtggctggcgggcaccaaagcggacgtggtgtgtctgcaggagacccgc
gcggaactcgatcagcttccccccgaggtggctgagccggacggctggcatgtggtgctg
gtgcctgccgcaaccaagggtcgtgccggagtggccgtgtattcgcggatgaaaccggat
gcggtgcggatcggattcggttctgcggagttcgcggattcggggcgttacgtggaggcg
gacttcgggccggtgagcgtggccagcctgtatctgccttccggacaggtgggcacgccg
ttgcaggaggagaaagagcggttcatggcggaattcctgccctatctggtgcgtcggcgc
accgaagtggaggcccaggggcgggagcttgcggtgtgcggcgactggaatatcgcgcac
caggaggctgacttgaagaactggcggggcaaccgcaagaactcgggtttccttccggaa
gagcggcagtggctttcccgggtgtatgaggaggcgggatacgtcgacgtggtgcgggcg
ttgcaccctgatcaggacggcccgtacacgtggtggtcgtatcgggggcgggcgttcgac
aatgacgcggggtggcgcatcgacttgcaggtcgctacgccgggtttggctgcgcgcgcc
caggaggcgtgggtggagcgggcgccgtcccatgaccagcggtggtcggatcacgcccct
gtcacggtggtgtatgccggctag
DBGET
integrated database retrieval system
