Thermobifida fusca: Tfu_1564
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Entry
Tfu_1564 CDS
T00265
Name
(GenBank) similar to Outer membrane protein and related peptidoglycan-associated (lipo)proteins
KO
K03286
OmpA-OmpF porin, OOP family
Organism
tfu
Thermobifida fusca
Brite
KEGG Orthology (KO) [BR:
tfu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tfu02000
]
Tfu_1564
Transporters [BR:
tfu02000
]
Other transporters
Pores ion channels [TC:
1
]
Tfu_1564
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
Motif
Other DBs
NCBI-ProteinID:
AAZ55600
UniProt:
Q47PL9
LinkDB
All DBs
Position
complement(1800887..1802452)
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AA seq
521 aa
AA seq
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MARNRRVLSFVALAASGCLFASGCSVVMSWVSGDGPPVVREEFPYVKEGVIFQDTGQDAT
MRFAITGLERTDDYTVLHYEITYPDEFEGANRNLSMTYTLVDPMTGRVYRPYVDDEGMKY
GSVSPTGNGMYPVFPGVTNEYRRYFPPLPPHVRQVTFVGSGLGAMTGIPVQDVDEERPEP
ENPNGGQHLSVDQPPAAGEKLTFDNRRPDEDAVAVEGWVESFVDSEIASVTRDGTTETIS
LHSDVMFEFDRADLTPEAEAVVRRAAETLERNVDPDHPEIIIIGHTDGIGTDAYNDDLSV
RRAETVRNLLVEEMGTGYTYVVEGRGSREPIAREGGPDDEQARARNRRVEFSYTIRMPGG
GEEETDDGLGVAGQHVSWPAPFTDDPGEVVASVERDGVRLDVYPLRRDGAFVVGTVTFTN
LTDTPVDPGLTGFAVAGGPERFSKGTLGGFQVVEPESGLVRYVAQMNFGDGVYSAFAEEV
HRLQPDRTYELVAVFSAPSSEVESVTLRAGPFGEIPDVPIE
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggaacaggcgcgtcttgtcgtttgtggcattagcggccagcggctgcttgttt
gcgagtggctgcagcgtggtgatgtcgtgggtgtccggggatggcccgccggtcgtccgc
gaagagttcccgtacgtcaaggaaggcgtgatcttccaggacacggggcaggatgcgacg
atgcggttcgctatcaccggcctggagcgcaccgacgactacaccgtgctccactatgag
atcacctatccggacgagtttgagggtgcgaaccgcaacctgagcatgacctacaccctg
gtcgatcccatgacggggcgggtgtatcggccgtatgtggacgacgaggggatgaagtac
gggtcggtgagtcccaccggtaacggcatgtacccggtgtttcctggggtgactaacgag
taccggcgctattttccgccgcttcccccgcacgtgcggcaggtgacgttcgtgggcagt
ggtttgggtgcgatgacggggattcccgtccaggacgtggacgaggagcggcccgagccg
gagaaccccaacggcggccagcacctgtcggtggaccagccgcctgcggctggggagaaa
ctcaccttcgacaaccggcggcctgatgaggacgcggtggcggtcgaaggctgggtggaa
agctttgtggactcggagatcgcgtcggtgaccagggacgggaccacggagacgatctcg
ctgcactctgacgtgatgttcgagtttgaccgggctgatttgacgccggaagccgaagcc
gtggtgcggcgggccgcggaaaccctggaacgcaacgtcgaccctgatcatccggagatc
atcatcatcggccacaccgacggtatcggcactgacgcctacaacgacgatttgtcggtg
cggcgggctgagacggtgcgtaaccttctggtggaggagatgggcaccggctacacctat
gtggtggaaggccgcggtagccgggagccgattgcgcgggaaggcggcccggatgacgag
caggcgcgggcccgtaaccggcgtgtggagttctcctacaccatccggatgcccgggggt
ggcgaggaagagaccgatgacgggctgggggtggccgggcagcacgtgtcgtggccggcg
ccgttcaccgacgacccgggtgaagtggtggccagtgtggagcgggacggggtgcggttg
gacgtctatccgctccgccgcgatggtgcttttgtggtgggaacggtgacgttcaccaac
ctcacggatacgcccgtggatcccgggttgacgggttttgcggtggctggcgggccggaa
cggttcagtaagggaaccttgggcggtttccaagtggtggagccggaaagcggcctggtg
cggtatgtggcccagatgaacttcggggacggggtctacagcgcgttcgctgaggaggtg
caccggttgcagccggaccgcacctacgagctggtggcggtgttttctgcgcctagttcg
gaggtggagtcggtgactttgcgtgctggaccgttcggggagatccctgacgttcccatc
gaataa
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